RNA–Protein interactions for RNA: ENST00000587480.1

TMC6-208, Transcript of transmembrane channel like 6, human

Gene TMC6, Length 253 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-208	ENST00000587480	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.86	■■■■□ 3.01
TMC6-208	ENST00000587480	C1orf167	Q5SNV9	1468 aa		33.86	■■■■□ 3.01
TMC6-208	ENST00000587480	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.85	■■■■□ 3.01
TMC6-208	ENST00000587480	TRPM1	Q7Z4N2	1603 aa		33.85	■■■■□ 3.01
TMC6-208	ENST00000587480	ADGRB2	O60241	1585 aa		33.85	■■■■□ 3.01
TMC6-208	ENST00000587480	PRAM1	Q96QH2	718 aa		33.84	■■■■□ 3.01
TMC6-208	ENST00000587480	TONSL	Q96HA7	1378 aa		33.84	■■■■□ 3.01
TMC6-208	ENST00000587480	BRINP3	Q76B58	766 aa		33.83	■■■■□ 3.01
TMC6-208	ENST00000587480	TRAK1	Q9UPV9	953 aa		33.82	■■■■□ 3
TMC6-208	ENST00000587480	FMN2	Q9NZ56	1722 aa		33.8	■■■■□ 3
TMC6-208	ENST00000587480	NBPF1	Q3BBV0	1214 aa		33.79	■■■■□ 3
TMC6-208	ENST00000587480	PHLPP1	O60346	1717 aa		33.79	■■■■□ 3
TMC6-208	ENST00000587480	COL16A1	Q07092	1604 aa	Predicted RBP	33.78	■■■■□ 3
TMC6-208	ENST00000587480	NHSL1	Q5SYE7	1610 aa		33.78	■■■■□ 3
TMC6-208	ENST00000587480	POGK	Q9P215	609 aa		33.77	■■■■□ 3
TMC6-208	ENST00000587480	GPRASP1	Q5JY77	1395 aa		33.73	■■■□□ 2.99
TMC6-208	ENST00000587480	NBPF8	Q3BBV2	869 aa		33.7	■■■□□ 2.99
TMC6-208	ENST00000587480	RALGAPB	Q86X10	1494 aa		33.69	■■■□□ 2.98
TMC6-208	ENST00000587480	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.68	■■■□□ 2.98
TMC6-208	ENST00000587480	TIMELESS	Q9UNS1	1208 aa		33.68	■■■□□ 2.98
TMC6-208	ENST00000587480	ROCK2	O75116	1388 aa	Known RBP	33.68	■■■□□ 2.98
TMC6-208	ENST00000587480	ANKAR	Q7Z5J8	1434 aa		33.68	■■■□□ 2.98
TMC6-208	ENST00000587480	EIF3A	Q14152	1382 aa	Known RBP	33.66	■■■□□ 2.98
TMC6-208	ENST00000587480	ORAI2	Q96SN7	254 aa		33.65	■■■□□ 2.98
TMC6-208	ENST00000587480	KIF1A	Q12756	1690 aa		33.64	■■■□□ 2.98
TMC6-208	ENST00000587480	JCAD	Q9P266	1359 aa		33.63	■■■□□ 2.97
TMC6-208	ENST00000587480	TULP4	Q9NRJ4	1543 aa		33.62	■■■□□ 2.97
TMC6-208	ENST00000587480	USP32	Q8NFA0	1604 aa		33.61	■■■□□ 2.97
TMC6-208	ENST00000587480	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.61	■■■□□ 2.97
TMC6-208	ENST00000587480	SHPRH	Q149N8	1683 aa		33.6	■■■□□ 2.97
TMC6-208	ENST00000587480	MED1	Q15648	1581 aa	Predicted RBP	33.6	■■■□□ 2.97
TMC6-208	ENST00000587480	WASL	O00401	505 aa	Predicted RBP	33.59	■■■□□ 2.97
TMC6-208	ENST00000587480	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.58	■■■□□ 2.97
TMC6-208	ENST00000587480	ESCO1	Q5FWF5	840 aa		33.58	■■■□□ 2.97
TMC6-208	ENST00000587480	SOS2	Q07890	1332 aa	Predicted RBP	33.57	■■■□□ 2.97
TMC6-208	ENST00000587480	NPHP3	Q7Z494	1330 aa		33.56	■■■□□ 2.96
TMC6-208	ENST00000587480	QRICH2	Q9H0J4	1663 aa		33.56	■■■□□ 2.96
TMC6-208	ENST00000587480	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.56	■■■□□ 2.96
TMC6-208	ENST00000587480	RGPD8	O14715	1765 aa	Predicted RBP	33.56	■■■□□ 2.96
TMC6-208	ENST00000587480	CCER1	Q8TC90	406 aa	Predicted RBP	33.55	■■■□□ 2.96
TMC6-208	ENST00000587480	PXDN	Q92626	1479 aa		33.54	■■■□□ 2.96
TMC6-208	ENST00000587480	NUTM2F	A1L443	756 aa		33.53	■■■□□ 2.96
TMC6-208	ENST00000587480	LRRC59	Q96AG4	307 aa	Known RBP	33.52	■■■□□ 2.96
TMC6-208	ENST00000587480	ATP7B	P35670	1465 aa		33.51	■■■□□ 2.96
TMC6-208	ENST00000587480	DDX17	Q92841	729 aa	Known RBP	33.51	■■■□□ 2.95
TMC6-208	ENST00000587480	SPATA31A6	Q5VVP1	1343 aa		33.5	■■■□□ 2.95
TMC6-208	ENST00000587480	PRR36	Q9H6K5	1346 aa		33.5	■■■□□ 2.95
TMC6-208	ENST00000587480	SBNO2	Q9Y2G9	1366 aa		33.48	■■■□□ 2.95
TMC6-208	ENST00000587480	ITSN1	Q15811	1721 aa		33.48	■■■□□ 2.95
TMC6-208	ENST00000587480	CARD11	Q9BXL7	1154 aa		33.48	■■■□□ 2.95
TMC6-208	ENST00000587480	PHF8	Q9UPP1	1060 aa		33.48	■■■□□ 2.95
TMC6-208	ENST00000587480	TOPAZ1	Q8N9V7	1692 aa		33.45	■■■□□ 2.95
TMC6-208	ENST00000587480	FOXO3	O43524	673 aa		33.45	■■■□□ 2.95
TMC6-208	ENST00000587480	CDK19	Q9BWU1	502 aa		33.45	■■■□□ 2.95
TMC6-208	ENST00000587480	PNPLA6	Q8IY17	1366 aa		33.45	■■■□□ 2.94
TMC6-208	ENST00000587480	DISP3	Q9P2K9	1392 aa		33.42	■■■□□ 2.94
TMC6-208	ENST00000587480	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.42	■■■□□ 2.94
TMC6-208	ENST00000587480	NUDT16	Q96DE0	195 aa	Known RBP	33.4	■■■□□ 2.94
TMC6-208	ENST00000587480	LRP6	O75581	1613 aa		33.37	■■■□□ 2.93
TMC6-208	ENST00000587480	SBNO1	A3KN83	1393 aa		33.36	■■■□□ 2.93
TMC6-208	ENST00000587480	EVC2	Q86UK5	1308 aa		33.36	■■■□□ 2.93
TMC6-208	ENST00000587480	CCDC61	Q9Y6R9	512 aa		33.36	■■■□□ 2.93
TMC6-208	ENST00000587480	KRT28	Q7Z3Y7	464 aa		33.34	■■■□□ 2.93
TMC6-208	ENST00000587480	SPATA31A3	Q5VYP0	1347 aa		33.33	■■■□□ 2.93
TMC6-208	ENST00000587480	PSME1	Q06323	249 aa		33.33	■■■□□ 2.93
TMC6-208	ENST00000587480	TRPM3	Q9HCF6	1732 aa	Predicted RBP	33.33	■■■□□ 2.93
TMC6-208	ENST00000587480	POLR3A	O14802	1390 aa	Predicted RBP	33.33	■■■□□ 2.93
TMC6-208	ENST00000587480	PLEKHG3	A1L390	1219 aa		33.32	■■■□□ 2.92
TMC6-208	ENST00000587480	TNS3	Q68CZ2	1445 aa		33.32	■■■□□ 2.92
TMC6-208	ENST00000587480	PMFBP1	Q8TBY8	1022 aa		33.32	■■■□□ 2.92
TMC6-208	ENST00000587480	XPC	Q01831	940 aa	Predicted RBP	33.31	■■■□□ 2.92
TMC6-208	ENST00000587480	SRPK2	P78362	688 aa	Known RBP	33.3	■■■□□ 2.92
TMC6-208	ENST00000587480	CABP2	Q9NPB3	220 aa		33.27	■■■□□ 2.92
TMC6-208	ENST00000587480	PPIP5K1	Q6PFW1	1433 aa		33.26	■■■□□ 2.91
TMC6-208	ENST00000587480	ARHGEF10	O15013	1369 aa		33.25	■■■□□ 2.91
TMC6-208	ENST00000587480	SLC24A1	O60721	1099 aa		33.25	■■■□□ 2.91
TMC6-208	ENST00000587480	NGDN	Q8NEJ9	315 aa	Known RBP	33.25	■■■□□ 2.91
TMC6-208	ENST00000587480	ALS2	Q96Q42	1657 aa		33.25	■■■□□ 2.91
TMC6-208	ENST00000587480	ATAD2	Q6PL18	1390 aa		33.24	■■■□□ 2.91
TMC6-208	ENST00000587480	USP47	Q96K76	1375 aa		33.24	■■■□□ 2.91
TMC6-208	ENST00000587480	PHF23	Q9BUL5	403 aa	Predicted RBP	33.23	■■■□□ 2.91
TMC6-208	ENST00000587480	PUS7	Q96PZ0	661 aa	Known RBP	33.22	■■■□□ 2.91
TMC6-208	ENST00000587480	TESK2	Q96S53	571 aa		33.22	■■■□□ 2.91
TMC6-208	ENST00000587480	ACE	P12821	1306 aa		33.21	■■■□□ 2.91
TMC6-208	ENST00000587480	ST20-MTHFS	A0A0A6YYL1	179 aa		33.2	■■■□□ 2.91
TMC6-208	ENST00000587480	BRD4	O60885	1362 aa	Predicted RBP	33.2	■■■□□ 2.9
TMC6-208	ENST00000587480	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.18	■■■□□ 2.9
TMC6-208	ENST00000587480	NUTM2E	B1AL46	878 aa	Predicted RBP	33.18	■■■□□ 2.9
TMC6-208	ENST00000587480	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.18	■■■□□ 2.9
TMC6-208	ENST00000587480	RGS17	Q9UGC6	210 aa	Predicted RBP	33.18	■■■□□ 2.9
TMC6-208	ENST00000587480	MEX3C	Q5U5Q3	659 aa	Known RBP	33.16	■■■□□ 2.9
TMC6-208	ENST00000587480	ABCA3	Q99758	1704 aa		33.14	■■■□□ 2.89
TMC6-208	ENST00000587480	CABP1	Q9NZU7	370 aa		33.13	■■■□□ 2.89
TMC6-208	ENST00000587480	MARF1	Q9Y4F3	1742 aa	Known RBP	33.13	■■■□□ 2.89
TMC6-208	ENST00000587480	USP6	P35125	1406 aa		33.11	■■■□□ 2.89
TMC6-208	ENST00000587480	AKAP12	Q02952	1782 aa		33.09	■■■□□ 2.89
TMC6-208	ENST00000587480	CRYBG1	Q9Y4K1	1723 aa		33.09	■■■□□ 2.89
TMC6-208	ENST00000587480	CPSF1	Q10570	1443 aa	Known RBP	33.09	■■■□□ 2.89
TMC6-208	ENST00000587480	SSH2	Q76I76	1423 aa		33.08	■■■□□ 2.89
TMC6-208	ENST00000587480	NINL	Q9Y2I6	1382 aa		33.07	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms