RNA–Protein interactions for RNA: ENST00000587427.5

GHDC-207, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GHDC, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-207ENST00000587427 FRAT1Q92837 279 aaPredicted RBP20.89■□□□□ 0.93
GHDC-207ENST00000587427 NUTM2DQ5VT03 806 aaPredicted RBP20.88■□□□□ 0.93
GHDC-207ENST00000587427 STAG3Q9UJ98 1225 aa20.88■□□□□ 0.93
GHDC-207ENST00000587427 SLC52A1Q9NWF4 448 aa20.88■□□□□ 0.93
GHDC-207ENST00000587427 SETD1BQ9UPS6 1966 aaKnown RBP20.86■□□□□ 0.93
GHDC-207ENST00000587427 TMF1P82094 1093 aa20.86■□□□□ 0.93
GHDC-207ENST00000587427 FAM161AQ3B820 660 aa20.86■□□□□ 0.93
GHDC-207ENST00000587427 DAXXQ9UER7 740 aaPredicted RBP20.86■□□□□ 0.93
GHDC-207ENST00000587427 CEP170BQ9Y4F5 1589 aaPredicted RBP20.85■□□□□ 0.93
GHDC-207ENST00000587427 MYO5BQ9ULV0 1848 aa20.85■□□□□ 0.93
GHDC-207ENST00000587427 ADAMTS8Q9UP79 889 aa20.84■□□□□ 0.93
GHDC-207ENST00000587427 LMTK3Q96Q04 1460 aa20.84■□□□□ 0.93
GHDC-207ENST00000587427 NLRP1Q9C000 1473 aa20.84■□□□□ 0.93
GHDC-207ENST00000587427 DUSP27Q5VZP5 1158 aa20.83■□□□□ 0.93
GHDC-207ENST00000587427 C8orf34Q49A92 452 aa20.82■□□□□ 0.92
GHDC-207ENST00000587427 ZNF521Q96K83 1311 aa20.82■□□□□ 0.92
GHDC-207ENST00000587427 A2ML1A8K2U0 1454 aa20.82■□□□□ 0.92
GHDC-207ENST00000587427 PLEKHH1Q9ULM0 1364 aa20.81■□□□□ 0.92
GHDC-207ENST00000587427 TMEM131LA2VDJ0 1609 aa20.81■□□□□ 0.92
GHDC-207ENST00000587427 UBR1Q8IWV7 1749 aa20.81■□□□□ 0.92
GHDC-207ENST00000587427 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.8■□□□□ 0.92
GHDC-207ENST00000587427 ADGRB3O60242 1522 aa20.79■□□□□ 0.92
GHDC-207ENST00000587427 FRAT2O75474 233 aaPredicted RBP20.78■□□□□ 0.92
GHDC-207ENST00000587427 KIF1BO60333 1816 aa20.77■□□□□ 0.92
GHDC-207ENST00000587427 ZNF142P52746 1687 aaPredicted RBP20.77■□□□□ 0.92
GHDC-207ENST00000587427 PPP2R1AP30153 589 aa20.77■□□□□ 0.91
GHDC-207ENST00000587427 GOLGA2Q08379 1002 aa20.77■□□□□ 0.91
GHDC-207ENST00000587427 WDR43Q15061 677 aaKnown RBP eCLIP20.77■□□□□ 0.91
GHDC-207ENST00000587427 LTKP29376 864 aa20.76■□□□□ 0.91
GHDC-207ENST00000587427 THEMISQ8N1K5 641 aaPredicted RBP20.75■□□□□ 0.91
GHDC-207ENST00000587427 RGS3P49796 1198 aa20.74■□□□□ 0.91
GHDC-207ENST00000587427 NCKAP5LQ9HCH0 1330 aa20.74■□□□□ 0.91
GHDC-207ENST00000587427 EIF3AQ14152 1382 aaKnown RBP20.73■□□□□ 0.91
GHDC-207ENST00000587427 TMEM2Q9UHN6 1383 aa20.73■□□□□ 0.91
GHDC-207ENST00000587427 SLFN5Q08AF3 891 aa20.73■□□□□ 0.91
GHDC-207ENST00000587427 KNSTRNQ9Y448 316 aa20.73■□□□□ 0.91
GHDC-207ENST00000587427 TRMT2AQ8IZ69 625 aaKnown RBP20.72■□□□□ 0.91
GHDC-207ENST00000587427 AMER1Q5JTC6 1135 aaPredicted RBP20.72■□□□□ 0.91
GHDC-207ENST00000587427 TXNDC2Q86VQ3 553 aa20.72■□□□□ 0.91
GHDC-207ENST00000587427 PIK3C2GO75747 1445 aa20.71■□□□□ 0.91
GHDC-207ENST00000587427 RIMS2Q9UQ26 1411 aa20.71■□□□□ 0.91
GHDC-207ENST00000587427 EIF5BO60841 1220 aaKnown RBP20.71■□□□□ 0.91
GHDC-207ENST00000587427 ZFYVE9O95405 1425 aa20.69■□□□□ 0.9
GHDC-207ENST00000587427 ADGRF5Q8IZF2 1346 aa20.68■□□□□ 0.9
GHDC-207ENST00000587427 NEXMIFQ5QGS0 1516 aa20.68■□□□□ 0.9
GHDC-207ENST00000587427 NPC1L1Q9UHC9 1359 aa20.67■□□□□ 0.9
GHDC-207ENST00000587427 CDCA8Q53HL2 280 aa20.66■□□□□ 0.9
GHDC-207ENST00000587427 ARHGAP23Q9P227 1491 aa20.66■□□□□ 0.9
GHDC-207ENST00000587427 ANKLE2Q86XL3 938 aa20.66■□□□□ 0.9
GHDC-207ENST00000587427 KDM5AP29375 1690 aaKnown RBP20.66■□□□□ 0.9
GHDC-207ENST00000587427 SLIT1O75093 1534 aa20.66■□□□□ 0.9
GHDC-207ENST00000587427 ASXL1Q8IXJ9 1541 aa20.66■□□□□ 0.9
GHDC-207ENST00000587427 NKTRP30414 1462 aaKnown RBP20.65■□□□□ 0.9
GHDC-207ENST00000587427 EID1Q9Y6B2 187 aa20.65■□□□□ 0.9
GHDC-207ENST00000587427 IQGAP1P46940 1657 aa20.63■□□□□ 0.89
GHDC-207ENST00000587427 SLC26A8Q96RN1 970 aa20.63■□□□□ 0.89
GHDC-207ENST00000587427 PPLO60437 1756 aa20.63■□□□□ 0.89
GHDC-207ENST00000587427 SCAF11Q99590 1463 aaKnown RBP20.63■□□□□ 0.89
GHDC-207ENST00000587427 STRCQ7RTU9 1775 aa20.62■□□□□ 0.89
GHDC-207ENST00000587427 IFT172Q9UG01 1749 aa20.61■□□□□ 0.89
GHDC-207ENST00000587427 NEURL4Q96JN8 1562 aa20.6■□□□□ 0.89
GHDC-207ENST00000587427 E9PSI1 815 aa20.6■□□□□ 0.89
GHDC-207ENST00000587427 USP19O94966 1318 aa20.6■□□□□ 0.89
GHDC-207ENST00000587427 RPGRIP1LQ68CZ1 1315 aa20.6■□□□□ 0.89
GHDC-207ENST00000587427 VGFO15240 615 aaPredicted RBP20.59■□□□□ 0.89
GHDC-207ENST00000587427 NGEFQ8N5V2 710 aa20.59■□□□□ 0.89
GHDC-207ENST00000587427 UBE2Q2Q8WVN8 375 aa20.59■□□□□ 0.89
GHDC-207ENST00000587427 SPINK5Q9NQ38 1064 aaPredicted RBP20.59■□□□□ 0.89
GHDC-207ENST00000587427 NINLQ9Y2I6 1382 aa20.58■□□□□ 0.89
GHDC-207ENST00000587427 BCAR3O75815 825 aa20.58■□□□□ 0.89
GHDC-207ENST00000587427 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.58■□□□□ 0.88
GHDC-207ENST00000587427 STAC3Q96MF2 364 aa20.58■□□□□ 0.88
GHDC-207ENST00000587427 CGNL1Q0VF96 1302 aa20.58■□□□□ 0.88
GHDC-207ENST00000587427 IGHDP01880 384 aa20.57■□□□□ 0.88
GHDC-207ENST00000587427 PDE3AQ14432 1141 aa20.57■□□□□ 0.88
GHDC-207ENST00000587427 CCDC146Q8IYE0 955 aa20.57■□□□□ 0.88
GHDC-207ENST00000587427 MAPK8IP3Q9UPT6 1336 aa20.57■□□□□ 0.88
GHDC-207ENST00000587427 CFAP70Q5T0N1 1121 aa20.57■□□□□ 0.88
GHDC-207ENST00000587427 FAM43AQ8N2R8 423 aa20.57■□□□□ 0.88
GHDC-207ENST00000587427 POGKQ9P215 609 aa20.57■□□□□ 0.88
GHDC-207ENST00000587427 APAF1O14727 1248 aa20.56■□□□□ 0.88
GHDC-207ENST00000587427 SEC24BO95487 1268 aa20.56■□□□□ 0.88
GHDC-207ENST00000587427 HDGFP51858 240 aaKnown RBP20.56■□□□□ 0.88
GHDC-207ENST00000587427 NPHP4O75161 1426 aaPredicted RBP20.55■□□□□ 0.88
GHDC-207ENST00000587427 VIRMAQ69YN4 1812 aaKnown RBP20.55■□□□□ 0.88
GHDC-207ENST00000587427 TMEM132EQ6IEE7 984 aa20.54■□□□□ 0.88
GHDC-207ENST00000587427 PLEKHG1Q9ULL1 1385 aa20.54■□□□□ 0.88
GHDC-207ENST00000587427 MYOM1P52179 1685 aa20.53■□□□□ 0.88
GHDC-207ENST00000587427 NRXN3Q9Y4C0 1643 aa20.53■□□□□ 0.88
GHDC-207ENST00000587427 BECN1Q14457 450 aa20.53■□□□□ 0.88
GHDC-207ENST00000587427 MYOM2P54296 1465 aa20.52■□□□□ 0.88
GHDC-207ENST00000587427 ADAMTS13Q76LX8 1427 aa20.52■□□□□ 0.88
GHDC-207ENST00000587427 CLUAP1Q96AJ1 413 aa20.51■□□□□ 0.87
GHDC-207ENST00000587427 SLKQ9H2G2 1235 aaPredicted RBP20.51■□□□□ 0.87
GHDC-207ENST00000587427 RSPH6AQ9H0K4 717 aa20.51■□□□□ 0.87
GHDC-207ENST00000587427 MED14O60244 1454 aa20.51■□□□□ 0.87
GHDC-207ENST00000587427 NRXN1Q9ULB1 1477 aa20.51■□□□□ 0.87
GHDC-207ENST00000587427 METP08581 1390 aa20.5■□□□□ 0.87
GHDC-207ENST00000587427 CENPJQ9HC77 1338 aaPredicted RBP20.49■□□□□ 0.87
GHDC-207ENST00000587427 DMRT2Q9Y5R5 561 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms