RNA–Protein interactions for RNA: ENST00000587328.2

PIK3C3-206, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 2

Gene PIK3C3, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-206ENST00000587328 ATP6V1AP38606 617 aa9.28□□□□□ -0.92
PIK3C3-206ENST00000587328 METTL3Q86U44 580 aaKnown RBP9.28□□□□□ -0.92
PIK3C3-206ENST00000587328 KIFC2Q96AC6 838 aa9.28□□□□□ -0.92
PIK3C3-206ENST00000587328 SLC27A5Q9Y2P5 690 aa9.27□□□□□ -0.93
PIK3C3-206ENST00000587328 SALL2Q9Y467 1007 aaPredicted RBP9.26□□□□□ -0.93
PIK3C3-206ENST00000587328 LOC100996750A0A140TA64 210 aa9.25□□□□□ -0.93
PIK3C3-206ENST00000587328 J3QL48 77 aa9.25□□□□□ -0.93
PIK3C3-206ENST00000587328 TRIM32Q13049 653 aa9.25□□□□□ -0.93
PIK3C3-206ENST00000587328 MSS51Q4VC12 460 aa9.25□□□□□ -0.93
PIK3C3-206ENST00000587328 SLC16A10Q8TF71 515 aa9.25□□□□□ -0.93
PIK3C3-206ENST00000587328 MRGPRX2Q96LB1 330 aa9.25□□□□□ -0.93
PIK3C3-206ENST00000587328 KRTAP4-6Q9BYQ5 205 aa9.25□□□□□ -0.93
PIK3C3-206ENST00000587328 DDX11L8A8MPP1 907 aa9.23□□□□□ -0.93
PIK3C3-206ENST00000587328 BRICD5Q6PL45 260 aa9.23□□□□□ -0.93
PIK3C3-206ENST00000587328 REPIN1Q9BWE0 567 aaKnown RBP9.23□□□□□ -0.93
PIK3C3-206ENST00000587328 DAXXQ9UER7 740 aaPredicted RBP9.23□□□□□ -0.93
PIK3C3-206ENST00000587328 FECHP22830 423 aa9.22□□□□□ -0.93
PIK3C3-206ENST00000587328 HPS1Q92902 700 aa9.22□□□□□ -0.93
PIK3C3-206ENST00000587328 ZSCAN1Q8NBB4 408 aa9.21□□□□□ -0.94
PIK3C3-206ENST00000587328 GCGRP47871 477 aa9.2□□□□□ -0.94
PIK3C3-206ENST00000587328 HIC1Q14526 733 aa9.2□□□□□ -0.94
PIK3C3-206ENST00000587328 RNF19BQ6ZMZ0 732 aa9.2□□□□□ -0.94
PIK3C3-206ENST00000587328 GMPRP36959 345 aa9.19□□□□□ -0.94
PIK3C3-206ENST00000587328 NXF1Q9UBU9 619 aaKnown RBP9.19□□□□□ -0.94
PIK3C3-206ENST00000587328 SULF1Q8IWU6 871 aa9.18□□□□□ -0.94
PIK3C3-206ENST00000587328 IRF7Q92985 503 aa9.18□□□□□ -0.94
PIK3C3-206ENST00000587328 MMP16P51512 607 aa9.16□□□□□ -0.94
PIK3C3-206ENST00000587328 GRIPAP1Q4V328 841 aa9.16□□□□□ -0.94
PIK3C3-206ENST00000587328 LORP23490 312 aaPredicted RBP9.15□□□□□ -0.94
PIK3C3-206ENST00000587328 Q3C1V9 767 aa9.15□□□□□ -0.94
PIK3C3-206ENST00000587328 NPAS3Q8IXF0 933 aa9.15□□□□□ -0.94
PIK3C3-206ENST00000587328 RC3H1Q5TC82 1133 aaKnown RBP9.14□□□□□ -0.95
PIK3C3-206ENST00000587328 NLRP7Q8WX94 980 aa9.14□□□□□ -0.95
PIK3C3-206ENST00000587328 BCANQ96GW7 911 aa9.13□□□□□ -0.95
PIK3C3-206ENST00000587328 WNT7BP56706 349 aa9.12□□□□□ -0.95
PIK3C3-206ENST00000587328 GNPATO15228 680 aa9.11□□□□□ -0.95
PIK3C3-206ENST00000587328 DXOO77932 396 aaKnown RBP9.11□□□□□ -0.95
PIK3C3-206ENST00000587328 ALDH1A1P00352 501 aa9.11□□□□□ -0.95
PIK3C3-206ENST00000587328 TESPA1A2RU30 521 aaPredicted RBP9.1□□□□□ -0.95
PIK3C3-206ENST00000587328 H3BM21 787 aa9.1□□□□□ -0.95
PIK3C3-206ENST00000587328 SEMA3EO15041 775 aa9.1□□□□□ -0.95
PIK3C3-206ENST00000587328 BMP1P13497 986 aa9.1□□□□□ -0.95
PIK3C3-206ENST00000587328 VEGFBP49765 207 aa9.1□□□□□ -0.95
PIK3C3-206ENST00000587328 SKOR1P84550 965 aa9.1□□□□□ -0.95
PIK3C3-206ENST00000587328 CCDC24Q8N4L8 307 aa9.1□□□□□ -0.95
PIK3C3-206ENST00000587328 USB1Q9BQ65 265 aaKnown RBP9.1□□□□□ -0.95
PIK3C3-206ENST00000587328 SMYD5Q6GMV2 418 aa9.07□□□□□ -0.96
PIK3C3-206ENST00000587328 TRIM46Q7Z4K8 759 aa9.07□□□□□ -0.96
PIK3C3-206ENST00000587328 ERBB4Q15303 1308 aa9.06□□□□□ -0.96
PIK3C3-206ENST00000587328 CAPN5O15484 640 aaPredicted RBP9.06□□□□□ -0.96
PIK3C3-206ENST00000587328 SUZ12Q15022 739 aaKnown RBP9.06□□□□□ -0.96
PIK3C3-206ENST00000587328 RBM26Q5T8P6 1007 aaKnown RBP9.05□□□□□ -0.96
PIK3C3-206ENST00000587328 PHOX2BQ99453 314 aa9.05□□□□□ -0.96
PIK3C3-206ENST00000587328 WASF2Q9Y6W5 498 aa9.04□□□□□ -0.96
PIK3C3-206ENST00000587328 GPR37O15354 613 aa9.02□□□□□ -0.97
PIK3C3-206ENST00000587328 EHBP1Q8NDI1 1231 aa9.02□□□□□ -0.97
PIK3C3-206ENST00000587328 TULP1O00294 542 aaPredicted RBP9□□□□□ -0.97
PIK3C3-206ENST00000587328 SIAH2O43255 324 aa9□□□□□ -0.97
PIK3C3-206ENST00000587328 KDM4AO75164 1064 aa9□□□□□ -0.97
PIK3C3-206ENST00000587328 CD46P15529 392 aa8.99□□□□□ -0.97
PIK3C3-206ENST00000587328 ZFP42Q96MM3 310 aa8.99□□□□□ -0.97
PIK3C3-206ENST00000587328 JUNDP17535 347 aa8.97□□□□□ -0.97
PIK3C3-206ENST00000587328 USP46P62068 366 aa8.97□□□□□ -0.97
PIK3C3-206ENST00000587328 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.97□□□□□ -0.97
PIK3C3-206ENST00000587328 HLA-CQ95604 372 aa8.96□□□□□ -0.98
PIK3C3-206ENST00000587328 VSIG8P0DPA2 414 aa8.94□□□□□ -0.98
PIK3C3-206ENST00000587328 KCNMA1Q12791 1236 aa8.94□□□□□ -0.98
PIK3C3-206ENST00000587328 KCTD17Q8N5Z5 321 aa8.94□□□□□ -0.98
PIK3C3-206ENST00000587328 NUDT12Q9BQG2 462 aa8.94□□□□□ -0.98
PIK3C3-206ENST00000587328 HOXA2O43364 376 aa8.93□□□□□ -0.98
PIK3C3-206ENST00000587328 SCARF1Q14162 830 aa8.93□□□□□ -0.98
PIK3C3-206ENST00000587328 PTCRAQ6ISU1 281 aaPredicted RBP8.93□□□□□ -0.98
PIK3C3-206ENST00000587328 MRPL14Q6P1L8 145 aaKnown RBP8.92□□□□□ -0.98
PIK3C3-206ENST00000587328 SH3BP2P78314 561 aa8.91□□□□□ -0.98
PIK3C3-206ENST00000587328 GUCA2AQ02747 115 aa8.9□□□□□ -0.98
PIK3C3-206ENST00000587328 PURBQ96QR8 312 aaKnown RBP8.9□□□□□ -0.98
PIK3C3-206ENST00000587328 TLL2Q9Y6L7 1015 aa8.9□□□□□ -0.98
PIK3C3-206ENST00000587328 GSK3AP49840 483 aa8.89□□□□□ -0.99
PIK3C3-206ENST00000587328 RETREG3Q86VR2 466 aa8.89□□□□□ -0.99
PIK3C3-206ENST00000587328 GPIHBP1Q8IV16 184 aa8.89□□□□□ -0.99
PIK3C3-206ENST00000587328 SYMPKQ92797 1274 aaKnown RBP8.89□□□□□ -0.99
PIK3C3-206ENST00000587328 PLEKHG3A1L390 1219 aa8.88□□□□□ -0.99
PIK3C3-206ENST00000587328 SOBPA7XYQ1 873 aa8.88□□□□□ -0.99
PIK3C3-206ENST00000587328 NNTQ13423 1086 aa8.88□□□□□ -0.99
PIK3C3-206ENST00000587328 CCNYL3P0C7X3 344 aa8.87□□□□□ -0.99
PIK3C3-206ENST00000587328 ADH1CP00326 375 aa8.86□□□□□ -0.99
PIK3C3-206ENST00000587328 TMEM151AQ8N4L1 468 aa8.86□□□□□ -0.99
PIK3C3-206ENST00000587328 MS4A1P11836 297 aa8.85□□□□□ -0.99
PIK3C3-206ENST00000587328 TIMP2P16035 220 aa8.85□□□□□ -0.99
PIK3C3-206ENST00000587328 WDR4P57081 412 aaKnown RBP8.85□□□□□ -0.99
PIK3C3-206ENST00000587328 LINC01559Q495D7 138 aa8.85□□□□□ -0.99
PIK3C3-206ENST00000587328 RNF225M0QZC1 329 aaPredicted RBP8.84□□□□□ -0.99
PIK3C3-206ENST00000587328 GDF11O95390 407 aa8.84□□□□□ -0.99
PIK3C3-206ENST00000587328 MDM2Q00987 491 aaPredicted RBP8.84□□□□□ -0.99
PIK3C3-206ENST00000587328 UNC93B1Q9H1C4 597 aa8.84□□□□□ -0.99
PIK3C3-206ENST00000587328 MAN1A2O60476 641 aa8.83□□□□□ -1
PIK3C3-206ENST00000587328 VARSP26640 1264 aaKnown RBP8.83□□□□□ -1
PIK3C3-206ENST00000587328 RASSF7Q02833 373 aa8.83□□□□□ -1
PIK3C3-206ENST00000587328 MPNDQ8N594 471 aa8.83□□□□□ -1
PIK3C3-206ENST00000587328 MAP2K5Q13163 448 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms