RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 ADGRB2O60241 1585 aa20.88■□□□□ 0.93
NFIX-208ENST00000587260 TULP4Q9NRJ4 1543 aa20.88■□□□□ 0.93
NFIX-208ENST00000587260 SIRT1Q96EB6 747 aa20.88■□□□□ 0.93
NFIX-208ENST00000587260 TESK2Q96S53 571 aa20.87■□□□□ 0.93
NFIX-208ENST00000587260 SBNO2Q9Y2G9 1366 aa20.86■□□□□ 0.93
NFIX-208ENST00000587260 PROSER2Q86WR7 435 aaPredicted RBP20.86■□□□□ 0.93
NFIX-208ENST00000587260 LRRC7Q96NW7 1537 aa20.86■□□□□ 0.93
NFIX-208ENST00000587260 LTBP4Q8N2S1 1624 aa20.85■□□□□ 0.93
NFIX-208ENST00000587260 TMEM94Q12767 1356 aa20.85■□□□□ 0.93
NFIX-208ENST00000587260 DISP3Q9P2K9 1392 aa20.85■□□□□ 0.93
NFIX-208ENST00000587260 ADGRL3Q9HAR2 1447 aa20.83■□□□□ 0.93
NFIX-208ENST00000587260 SLC24A1O60721 1099 aa20.83■□□□□ 0.92
NFIX-208ENST00000587260 C14orf37Q86TY3 774 aa20.83■□□□□ 0.92
NFIX-208ENST00000587260 CDC42BPGQ6DT37 1551 aa20.83■□□□□ 0.92
NFIX-208ENST00000587260 C11orf95C9JLR9 678 aaPredicted RBP20.81■□□□□ 0.92
NFIX-208ENST00000587260 FMN2Q9NZ56 1722 aa20.81■□□□□ 0.92
NFIX-208ENST00000587260 TMF1P82094 1093 aa20.8■□□□□ 0.92
NFIX-208ENST00000587260 WASHC2AQ641Q2 1341 aa20.8■□□□□ 0.92
NFIX-208ENST00000587260 EVC2Q86UK5 1308 aa20.78■□□□□ 0.92
NFIX-208ENST00000587260 CCDC7Q96M83 1385 aa20.78■□□□□ 0.92
NFIX-208ENST00000587260 POLR3GLQ9BT43 218 aa20.78■□□□□ 0.92
NFIX-208ENST00000587260 MYOM1P52179 1685 aa20.77■□□□□ 0.91
NFIX-208ENST00000587260 KIF7Q2M1P5 1343 aa20.76■□□□□ 0.91
NFIX-208ENST00000587260 USP32Q8NFA0 1604 aa20.76■□□□□ 0.91
NFIX-208ENST00000587260 RGPD8O14715 1765 aaPredicted RBP20.76■□□□□ 0.91
NFIX-208ENST00000587260 NCOA3Q9Y6Q9 1424 aa20.76■□□□□ 0.91
NFIX-208ENST00000587260 SRPK2P78362 688 aaKnown RBP20.75■□□□□ 0.91
NFIX-208ENST00000587260 WASLO00401 505 aaPredicted RBP20.74■□□□□ 0.91
NFIX-208ENST00000587260 CDK19Q9BWU1 502 aa20.74■□□□□ 0.91
NFIX-208ENST00000587260 CABP2Q9NPB3 220 aa20.74■□□□□ 0.91
NFIX-208ENST00000587260 MSH6P52701 1360 aa20.74■□□□□ 0.91
NFIX-208ENST00000587260 TOPAZ1Q8N9V7 1692 aa20.73■□□□□ 0.91
NFIX-208ENST00000587260 ITSN1Q15811 1721 aa20.73■□□□□ 0.91
NFIX-208ENST00000587260 ATP7BP35670 1465 aa20.73■□□□□ 0.91
NFIX-208ENST00000587260 NUTM2FA1L443 756 aa20.73■□□□□ 0.91
NFIX-208ENST00000587260 CDCA8Q53HL2 280 aa20.71■□□□□ 0.91
NFIX-208ENST00000587260 DCCP43146 1447 aa20.71■□□□□ 0.91
NFIX-208ENST00000587260 C19orf44Q9H6X5 657 aa20.7■□□□□ 0.9
NFIX-208ENST00000587260 DIEXFQ68CQ4 756 aaKnown RBP20.69■□□□□ 0.9
NFIX-208ENST00000587260 PUS7Q96PZ0 661 aaKnown RBP20.68■□□□□ 0.9
NFIX-208ENST00000587260 PRR36Q9H6K5 1346 aa20.68■□□□□ 0.9
NFIX-208ENST00000587260 ATF3P18847 181 aa20.68■□□□□ 0.9
NFIX-208ENST00000587260 DDX10Q13206 875 aaKnown RBP20.68■□□□□ 0.9
NFIX-208ENST00000587260 ILDR1Q86SU0 546 aaPredicted RBP20.68■□□□□ 0.9
NFIX-208ENST00000587260 ATAD2Q6PL18 1390 aa20.67■□□□□ 0.9
NFIX-208ENST00000587260 MST1RQ04912 1400 aa20.66■□□□□ 0.9
NFIX-208ENST00000587260 ANKARQ7Z5J8 1434 aa20.66■□□□□ 0.9
NFIX-208ENST00000587260 PPIP5K1Q6PFW1 1433 aa20.65■□□□□ 0.9
NFIX-208ENST00000587260 NUDT16Q96DE0 195 aaKnown RBP20.65■□□□□ 0.9
NFIX-208ENST00000587260 CERKQ8TCT0 537 aa20.64■□□□□ 0.9
NFIX-208ENST00000587260 TMC1Q8TDI8 760 aa20.64■□□□□ 0.9
NFIX-208ENST00000587260 CADPS2Q86UW7 1296 aa20.63■□□□□ 0.89
NFIX-208ENST00000587260 C1orf167Q5SNV9 1468 aa20.63■□□□□ 0.89
NFIX-208ENST00000587260 AKAP12Q02952 1782 aa20.62■□□□□ 0.89
NFIX-208ENST00000587260 KIF1AQ12756 1690 aa20.61■□□□□ 0.89
NFIX-208ENST00000587260 IQSEC2Q5JU85 1478 aa20.6■□□□□ 0.89
NFIX-208ENST00000587260 SLC12A5Q9H2X9 1139 aa20.59■□□□□ 0.89
NFIX-208ENST00000587260 CABP1Q9NZU7 370 aa20.59■□□□□ 0.89
NFIX-208ENST00000587260 CCDC61Q9Y6R9 512 aa20.59■□□□□ 0.89
NFIX-208ENST00000587260 NINLQ9Y2I6 1382 aa20.59■□□□□ 0.89
NFIX-208ENST00000587260 FBXO41Q8TF61 875 aa20.58■□□□□ 0.89
NFIX-208ENST00000587260 MON2Q7Z3U7 1717 aa20.58■□□□□ 0.88
NFIX-208ENST00000587260 ESCO1Q5FWF5 840 aa20.58■□□□□ 0.88
NFIX-208ENST00000587260 CD163L1Q9NR16 1453 aa20.58■□□□□ 0.88
NFIX-208ENST00000587260 PMFBP1Q8TBY8 1022 aa20.57■□□□□ 0.88
NFIX-208ENST00000587260 ORAI2Q96SN7 254 aa20.57■□□□□ 0.88
NFIX-208ENST00000587260 A0A1W2PP64 1363 aa20.56■□□□□ 0.88
NFIX-208ENST00000587260 ROBO1Q9Y6N7 1651 aa20.56■□□□□ 0.88
NFIX-208ENST00000587260 ANKRD36BQ8N2N9 1353 aa20.54■□□□□ 0.88
NFIX-208ENST00000587260 SLAIN2Q9P270 581 aa20.54■□□□□ 0.88
NFIX-208ENST00000587260 PHF8Q9UPP1 1060 aa20.54■□□□□ 0.88
NFIX-208ENST00000587260 NRKQ7Z2Y5 1582 aa20.54■□□□□ 0.88
NFIX-208ENST00000587260 PANK3Q9H999 370 aa20.53■□□□□ 0.88
NFIX-208ENST00000587260 ACEP12821 1306 aa20.52■□□□□ 0.88
NFIX-208ENST00000587260 PLEKHG3A1L390 1219 aa20.51■□□□□ 0.87
NFIX-208ENST00000587260 NGDNQ8NEJ9 315 aaKnown RBP20.51■□□□□ 0.87
NFIX-208ENST00000587260 POLR3AO14802 1390 aaPredicted RBP20.51■□□□□ 0.87
NFIX-208ENST00000587260 CPSF1Q10570 1443 aaKnown RBP20.5■□□□□ 0.87
NFIX-208ENST00000587260 UBAP1LF5GYI3 381 aa20.5■□□□□ 0.87
NFIX-208ENST00000587260 BRINP3Q76B58 766 aa20.5■□□□□ 0.87
NFIX-208ENST00000587260 HDGFL2Q7Z4V5 671 aaPredicted RBP20.5■□□□□ 0.87
NFIX-208ENST00000587260 TERF2IPQ9NYB0 399 aa20.5■□□□□ 0.87
NFIX-208ENST00000587260 NHSL1Q5SYE7 1610 aa20.5■□□□□ 0.87
NFIX-208ENST00000587260 KTN1Q86UP2 1357 aaKnown RBP20.5■□□□□ 0.87
NFIX-208ENST00000587260 NSD3Q9BZ95 1437 aa20.5■□□□□ 0.87
NFIX-208ENST00000587260 PER1O15534 1290 aaPredicted RBP20.49■□□□□ 0.87
NFIX-208ENST00000587260 KIF20BQ96Q89 1820 aa20.49■□□□□ 0.87
NFIX-208ENST00000587260 TOM1O60784 492 aa20.48■□□□□ 0.87
NFIX-208ENST00000587260 SCAF1Q9H7N4 1312 aaKnown RBP20.47■□□□□ 0.87
NFIX-208ENST00000587260 USP6P35125 1406 aa20.47■□□□□ 0.87
NFIX-208ENST00000587260 TRPM3Q9HCF6 1732 aaPredicted RBP20.47■□□□□ 0.87
NFIX-208ENST00000587260 FOXO3O43524 673 aa20.47■□□□□ 0.87
NFIX-208ENST00000587260 PIP4K2BP78356 416 aa20.47■□□□□ 0.87
NFIX-208ENST00000587260 DDX17Q92841 729 aaKnown RBP20.47■□□□□ 0.87
NFIX-208ENST00000587260 XPCQ01831 940 aaPredicted RBP20.46■□□□□ 0.87
NFIX-208ENST00000587260 CARD14Q9BXL6 1004 aa20.46■□□□□ 0.87
NFIX-208ENST00000587260 EDC4Q6P2E9 1401 aaKnown RBP20.44■□□□□ 0.86
NFIX-208ENST00000587260 PXDNQ92626 1479 aa20.43■□□□□ 0.86
NFIX-208ENST00000587260 PIK3C2AO00443 1686 aa20.43■□□□□ 0.86
NFIX-208ENST00000587260 PSME1Q06323 249 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms