RNA–Protein interactions for RNA: ENST00000587257.1

LRFN3-203, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 529 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-203ENST00000587257 NPHP3Q7Z494 1330 aa22.3■■□□□ 1.16
LRFN3-203ENST00000587257 CCDC125Q86Z20 511 aa22.27■■□□□ 1.16
LRFN3-203ENST00000587257 RPGRIP1LQ68CZ1 1315 aa22.27■■□□□ 1.16
LRFN3-203ENST00000587257 ESCO1Q5FWF5 840 aa22.26■■□□□ 1.15
LRFN3-203ENST00000587257 KIF1BO60333 1816 aa22.26■■□□□ 1.15
LRFN3-203ENST00000587257 CDC42BPGQ6DT37 1551 aa22.25■■□□□ 1.15
LRFN3-203ENST00000587257 BCL9LQ86UU0 1499 aa22.25■■□□□ 1.15
LRFN3-203ENST00000587257 PXDNQ92626 1479 aa22.24■■□□□ 1.15
LRFN3-203ENST00000587257 LRPPRCP42704 1394 aaKnown RBP22.22■■□□□ 1.15
LRFN3-203ENST00000587257 NAIPQ13075 1403 aa22.22■■□□□ 1.15
LRFN3-203ENST00000587257 FOXO3O43524 673 aa22.21■■□□□ 1.15
LRFN3-203ENST00000587257 GJD4Q96KN9 370 aaPredicted RBP22.21■■□□□ 1.15
LRFN3-203ENST00000587257 XPCQ01831 940 aaPredicted RBP22.2■■□□□ 1.14
LRFN3-203ENST00000587257 PPARGC1BQ86YN6 1023 aaKnown RBP22.2■■□□□ 1.14
LRFN3-203ENST00000587257 EP400Q96L91 3159 aa22.2■■□□□ 1.14
LRFN3-203ENST00000587257 BLMP54132 1417 aaPredicted RBP22.15■■□□□ 1.14
LRFN3-203ENST00000587257 UNC5CLQ8IV45 518 aa22.15■■□□□ 1.14
LRFN3-203ENST00000587257 SLC4A1APQ9BWU0 796 aaKnown RBP22.15■■□□□ 1.14
LRFN3-203ENST00000587257 RALGAPBQ86X10 1494 aa22.15■■□□□ 1.14
LRFN3-203ENST00000587257 PPLO60437 1756 aa22.14■■□□□ 1.13
LRFN3-203ENST00000587257 TECPR2O15040 1411 aa22.14■■□□□ 1.13
LRFN3-203ENST00000587257 SLIT2O94813 1529 aa22.13■■□□□ 1.13
LRFN3-203ENST00000587257 NUTM2FA1L443 756 aa22.13■■□□□ 1.13
LRFN3-203ENST00000587257 MARF1Q9Y4F3 1742 aaKnown RBP22.13■■□□□ 1.13
LRFN3-203ENST00000587257 RRBP1Q9P2E9 1410 aaKnown RBP22.13■■□□□ 1.13
LRFN3-203ENST00000587257 STK26Q9P289 416 aa22.12■■□□□ 1.13
LRFN3-203ENST00000587257 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.11■■□□□ 1.13
LRFN3-203ENST00000587257 SPATA31A3Q5VYP0 1347 aa22.11■■□□□ 1.13
LRFN3-203ENST00000587257 CCDC144AA2RUR9 1427 aa22.11■■□□□ 1.13
LRFN3-203ENST00000587257 GLI3P10071 1580 aa22.1■■□□□ 1.13
LRFN3-203ENST00000587257 WAPLQ7Z5K2 1190 aa22.1■■□□□ 1.13
LRFN3-203ENST00000587257 ADGRF5Q8IZF2 1346 aa22.09■■□□□ 1.13
LRFN3-203ENST00000587257 SF3B2Q13435 895 aaKnown RBP22.08■■□□□ 1.13
LRFN3-203ENST00000587257 ABCC11Q96J66 1382 aa22.08■■□□□ 1.12
LRFN3-203ENST00000587257 USP32Q8NFA0 1604 aa22.07■■□□□ 1.12
LRFN3-203ENST00000587257 HAP1P54257 671 aaPredicted RBP22.07■■□□□ 1.12
LRFN3-203ENST00000587257 ANKRD30BQ9BXX2 1392 aa22.06■■□□□ 1.12
LRFN3-203ENST00000587257 PLEKHH1Q9ULM0 1364 aa22.06■■□□□ 1.12
LRFN3-203ENST00000587257 KIF1AQ12756 1690 aa22.06■■□□□ 1.12
LRFN3-203ENST00000587257 DEFB132Q7Z7B7 95 aa22.05■■□□□ 1.12
LRFN3-203ENST00000587257 SEPT12Q8IYM1 358 aa22.05■■□□□ 1.12
LRFN3-203ENST00000587257 KRT28Q7Z3Y7 464 aa22.04■■□□□ 1.12
LRFN3-203ENST00000587257 VPS72Q15906 364 aa22.03■■□□□ 1.12
LRFN3-203ENST00000587257 RGL3Q3MIN7 710 aa22.03■■□□□ 1.12
LRFN3-203ENST00000587257 TNS3Q68CZ2 1445 aa22.03■■□□□ 1.12
LRFN3-203ENST00000587257 FMN2Q9NZ56 1722 aa22.03■■□□□ 1.12
LRFN3-203ENST00000587257 TMEM132EQ6IEE7 984 aa22.02■■□□□ 1.12
LRFN3-203ENST00000587257 SPATA31E1Q6ZUB1 1445 aa22.02■■□□□ 1.12
LRFN3-203ENST00000587257 KNDC1Q76NI1 1749 aa22.02■■□□□ 1.12
LRFN3-203ENST00000587257 PIK3C2GO75747 1445 aa22.01■■□□□ 1.11
LRFN3-203ENST00000587257 CCDC9Q9Y3X0 531 aaKnown RBP22.01■■□□□ 1.11
LRFN3-203ENST00000587257 YTHDC2Q9H6S0 1430 aaKnown RBP22■■□□□ 1.11
LRFN3-203ENST00000587257 PSME1Q06323 249 aa22■■□□□ 1.11
LRFN3-203ENST00000587257 PHF8Q9UPP1 1060 aa21.99■■□□□ 1.11
LRFN3-203ENST00000587257 KRT27Q7Z3Y8 459 aa21.98■■□□□ 1.11
LRFN3-203ENST00000587257 CABLES1Q8TDN4 633 aa21.98■■□□□ 1.11
LRFN3-203ENST00000587257 ONECUT3O60422 494 aaPredicted RBP21.97■■□□□ 1.11
LRFN3-203ENST00000587257 SBNO1A3KN83 1393 aa21.97■■□□□ 1.11
LRFN3-203ENST00000587257 ARHGEF10O15013 1369 aa21.97■■□□□ 1.11
LRFN3-203ENST00000587257 LRP5O75197 1615 aa21.96■■□□□ 1.11
LRFN3-203ENST00000587257 PLEKHG5O94827 1062 aa21.96■■□□□ 1.11
LRFN3-203ENST00000587257 SIRT1Q96EB6 747 aa21.96■■□□□ 1.11
LRFN3-203ENST00000587257 LMOD2Q6P5Q4 547 aa21.95■■□□□ 1.1
LRFN3-203ENST00000587257 IFT172Q9UG01 1749 aa21.94■■□□□ 1.1
LRFN3-203ENST00000587257 BRWD3Q6RI45 1802 aa21.94■■□□□ 1.1
LRFN3-203ENST00000587257 A0A0G2JS52 829 aa21.94■■□□□ 1.1
LRFN3-203ENST00000587257 MYT1Q01538 1121 aa21.94■■□□□ 1.1
LRFN3-203ENST00000587257 NRXN1Q9ULB1 1477 aa21.94■■□□□ 1.1
LRFN3-203ENST00000587257 PLCH1Q4KWH8 1693 aa21.94■■□□□ 1.1
LRFN3-203ENST00000587257 NWD2Q9ULI1 1742 aa21.94■■□□□ 1.1
LRFN3-203ENST00000587257 BAG6P46379 1132 aa21.93■■□□□ 1.1
LRFN3-203ENST00000587257 C14orf93Q9H972 538 aaKnown RBP21.9■■□□□ 1.1
LRFN3-203ENST00000587257 DHX57Q6P158 1386 aaKnown RBP21.89■■□□□ 1.1
LRFN3-203ENST00000587257 PSDA5PKW4 1024 aaPredicted RBP21.89■■□□□ 1.09
LRFN3-203ENST00000587257 FAM83GA6ND36 823 aa21.89■■□□□ 1.09
LRFN3-203ENST00000587257 ABCA3Q99758 1704 aa21.89■■□□□ 1.09
LRFN3-203ENST00000587257 FAM98CQ17RN3 349 aaKnown RBP21.88■■□□□ 1.09
LRFN3-203ENST00000587257 PRAM1Q96QH2 718 aa21.88■■□□□ 1.09
LRFN3-203ENST00000587257 MPHOSPH9Q99550 1183 aa21.88■■□□□ 1.09
LRFN3-203ENST00000587257 ANKARQ7Z5J8 1434 aa21.88■■□□□ 1.09
LRFN3-203ENST00000587257 SAFB2Q14151 953 aaKnown RBP eCLIP21.87■■□□□ 1.09
LRFN3-203ENST00000587257 HRCP23327 699 aa21.86■■□□□ 1.09
LRFN3-203ENST00000587257 CFAP70Q5T0N1 1121 aa21.85■■□□□ 1.09
LRFN3-203ENST00000587257 PMFBP1Q8TBY8 1022 aa21.84■■□□□ 1.09
LRFN3-203ENST00000587257 BTG4Q9NY30 223 aa21.84■■□□□ 1.09
LRFN3-203ENST00000587257 POGKQ9P215 609 aa21.83■■□□□ 1.09
LRFN3-203ENST00000587257 RGPD8O14715 1765 aaPredicted RBP21.82■■□□□ 1.08
LRFN3-203ENST00000587257 NRAPQ86VF7 1730 aa21.82■■□□□ 1.08
LRFN3-203ENST00000587257 GPRASP1Q5JY77 1395 aa21.82■■□□□ 1.08
LRFN3-203ENST00000587257 DLC1Q96QB1 1528 aa21.81■■□□□ 1.08
LRFN3-203ENST00000587257 EN1Q05925 392 aaPredicted RBP21.81■■□□□ 1.08
LRFN3-203ENST00000587257 ADGRB2O60241 1585 aa21.8■■□□□ 1.08
LRFN3-203ENST00000587257 EIF3AQ14152 1382 aaKnown RBP21.79■■□□□ 1.08
LRFN3-203ENST00000587257 DISP2A7MBM2 1401 aa21.79■■□□□ 1.08
LRFN3-203ENST00000587257 COL14A1Q05707 1796 aaKnown RBP21.79■■□□□ 1.08
LRFN3-203ENST00000587257 SPATA31A5Q5VU36 1347 aa21.78■■□□□ 1.08
LRFN3-203ENST00000587257 SPATA31A7Q8IWB4 1347 aa21.78■■□□□ 1.08
LRFN3-203ENST00000587257 ACIN1Q9UKV3 1341 aaKnown RBP21.78■■□□□ 1.08
LRFN3-203ENST00000587257 R3HDM1Q15032 1099 aaKnown RBP21.77■■□□□ 1.08
LRFN3-203ENST00000587257 RGPD1P0DJD0 1748 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms