RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 STK26Q9P289 416 aa23.39■■□□□ 1.33
VAT1-205ENST00000587173 CDC42BPGQ6DT37 1551 aa23.37■■□□□ 1.33
VAT1-205ENST00000587173 QTRT2Q9H974 415 aaKnown RBP23.37■■□□□ 1.33
VAT1-205ENST00000587173 LRPPRCP42704 1394 aaKnown RBP23.37■■□□□ 1.33
VAT1-205ENST00000587173 TECPR2O15040 1411 aa23.36■■□□□ 1.33
VAT1-205ENST00000587173 ESCO1Q5FWF5 840 aa23.36■■□□□ 1.33
VAT1-205ENST00000587173 NGLY1Q96IV0 654 aa23.36■■□□□ 1.33
VAT1-205ENST00000587173 WAPLQ7Z5K2 1190 aa23.35■■□□□ 1.33
VAT1-205ENST00000587173 ACIN1Q9UKV3 1341 aaKnown RBP23.34■■□□□ 1.33
VAT1-205ENST00000587173 PIK3C2GO75747 1445 aa23.34■■□□□ 1.33
VAT1-205ENST00000587173 RBM6P78332 1123 aaKnown RBP23.34■■□□□ 1.33
VAT1-205ENST00000587173 TMEM132EQ6IEE7 984 aa23.34■■□□□ 1.33
VAT1-205ENST00000587173 NPHP3Q7Z494 1330 aa23.33■■□□□ 1.33
VAT1-205ENST00000587173 ABCC11Q96J66 1382 aa23.33■■□□□ 1.33
VAT1-205ENST00000587173 RGS12O14924 1447 aa23.33■■□□□ 1.32
VAT1-205ENST00000587173 IFT172Q9UG01 1749 aa23.32■■□□□ 1.32
VAT1-205ENST00000587173 PLEKHH1Q9ULM0 1364 aa23.31■■□□□ 1.32
VAT1-205ENST00000587173 NUTM2FA1L443 756 aa23.3■■□□□ 1.32
VAT1-205ENST00000587173 FOXO3O43524 673 aa23.29■■□□□ 1.32
VAT1-205ENST00000587173 XPCQ01831 940 aaPredicted RBP23.29■■□□□ 1.32
VAT1-205ENST00000587173 YTHDC2Q9H6S0 1430 aaKnown RBP23.28■■□□□ 1.32
VAT1-205ENST00000587173 USP21Q9UK80 565 aa23.28■■□□□ 1.32
VAT1-205ENST00000587173 PXDNQ92626 1479 aa23.28■■□□□ 1.32
VAT1-205ENST00000587173 KNDC1Q76NI1 1749 aa23.28■■□□□ 1.32
VAT1-205ENST00000587173 COL22A1Q8NFW1 1626 aaPredicted RBP23.27■■□□□ 1.32
VAT1-205ENST00000587173 MYOM2P54296 1465 aa23.26■■□□□ 1.31
VAT1-205ENST00000587173 FNBP4Q8N3X1 1017 aaPredicted RBP23.25■■□□□ 1.31
VAT1-205ENST00000587173 TRPC5Q9UL62 973 aaPredicted RBP23.25■■□□□ 1.31
VAT1-205ENST00000587173 C14orf93Q9H972 538 aaKnown RBP23.24■■□□□ 1.31
VAT1-205ENST00000587173 NRXN1Q9ULB1 1477 aa23.23■■□□□ 1.31
VAT1-205ENST00000587173 CFAP70Q5T0N1 1121 aa23.22■■□□□ 1.31
VAT1-205ENST00000587173 SIRT1Q96EB6 747 aa23.22■■□□□ 1.31
VAT1-205ENST00000587173 RAB3GAP2Q9H2M9 1393 aa23.22■■□□□ 1.31
VAT1-205ENST00000587173 ATRNO75882 1429 aa23.21■■□□□ 1.31
VAT1-205ENST00000587173 DHX57Q6P158 1386 aaKnown RBP23.2■■□□□ 1.3
VAT1-205ENST00000587173 FMN2Q9NZ56 1722 aa23.19■■□□□ 1.3
VAT1-205ENST00000587173 SPATA31A3Q5VYP0 1347 aa23.16■■□□□ 1.3
VAT1-205ENST00000587173 PRAM1Q96QH2 718 aa23.16■■□□□ 1.3
VAT1-205ENST00000587173 KIF1AQ12756 1690 aa23.16■■□□□ 1.3
VAT1-205ENST00000587173 ATAD2Q6PL18 1390 aa23.15■■□□□ 1.3
VAT1-205ENST00000587173 SAFB2Q14151 953 aaKnown RBP eCLIP23.15■■□□□ 1.3
VAT1-205ENST00000587173 KRT28Q7Z3Y7 464 aa23.15■■□□□ 1.3
VAT1-205ENST00000587173 BCL9LQ86UU0 1499 aa23.15■■□□□ 1.3
VAT1-205ENST00000587173 PHF8Q9UPP1 1060 aa23.14■■□□□ 1.29
VAT1-205ENST00000587173 POGKQ9P215 609 aa23.11■■□□□ 1.29
VAT1-205ENST00000587173 DLC1Q96QB1 1528 aa23.1■■□□□ 1.29
VAT1-205ENST00000587173 PSME1Q06323 249 aa23.1■■□□□ 1.29
VAT1-205ENST00000587173 TNS3Q68CZ2 1445 aa23.09■■□□□ 1.29
VAT1-205ENST00000587173 MARF1Q9Y4F3 1742 aaKnown RBP23.09■■□□□ 1.29
VAT1-205ENST00000587173 GJD4Q96KN9 370 aaPredicted RBP23.09■■□□□ 1.29
VAT1-205ENST00000587173 ADGRB1O14514 1584 aa23.07■■□□□ 1.28
VAT1-205ENST00000587173 HAP1P54257 671 aaPredicted RBP23.07■■□□□ 1.28
VAT1-205ENST00000587173 UNC5CLQ8IV45 518 aa23.07■■□□□ 1.28
VAT1-205ENST00000587173 SLIT2O94813 1529 aa23.07■■□□□ 1.28
VAT1-205ENST00000587173 SBNO1A3KN83 1393 aa23.06■■□□□ 1.28
VAT1-205ENST00000587173 TRAK1Q9UPV9 953 aa23.06■■□□□ 1.28
VAT1-205ENST00000587173 KDM2AQ9Y2K7 1162 aa23.06■■□□□ 1.28
VAT1-205ENST00000587173 USP32Q8NFA0 1604 aa23.05■■□□□ 1.28
VAT1-205ENST00000587173 PLEKHG5O94827 1062 aa23.05■■□□□ 1.28
VAT1-205ENST00000587173 ANKARQ7Z5J8 1434 aa23.05■■□□□ 1.28
VAT1-205ENST00000587173 LMOD2Q6P5Q4 547 aa23.04■■□□□ 1.28
VAT1-205ENST00000587173 PMFBP1Q8TBY8 1022 aa23.04■■□□□ 1.28
VAT1-205ENST00000587173 CABLES1Q8TDN4 633 aa23.04■■□□□ 1.28
VAT1-205ENST00000587173 DCAF11Q8TEB1 546 aa23.04■■□□□ 1.28
VAT1-205ENST00000587173 ADGRB2O60241 1585 aa23.03■■□□□ 1.28
VAT1-205ENST00000587173 HIRIP3Q9BW71 556 aaPredicted RBP23.03■■□□□ 1.28
VAT1-205ENST00000587173 RGPD8O14715 1765 aaPredicted RBP23.03■■□□□ 1.28
VAT1-205ENST00000587173 RALGAPBQ86X10 1494 aa23.03■■□□□ 1.28
VAT1-205ENST00000587173 ARHGEF10O15013 1369 aa23.02■■□□□ 1.28
VAT1-205ENST00000587173 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.02■■□□□ 1.28
VAT1-205ENST00000587173 MINK1Q8N4C8 1332 aaPredicted RBP23.01■■□□□ 1.27
VAT1-205ENST00000587173 GLI3P10071 1580 aa23■■□□□ 1.27
VAT1-205ENST00000587173 HRCP23327 699 aa22.99■■□□□ 1.27
VAT1-205ENST00000587173 EIF3AQ14152 1382 aaKnown RBP22.99■■□□□ 1.27
VAT1-205ENST00000587173 STAC3Q96MF2 364 aa22.98■■□□□ 1.27
VAT1-205ENST00000587173 PRR36Q9H6K5 1346 aa22.97■■□□□ 1.27
VAT1-205ENST00000587173 WASLO00401 505 aaPredicted RBP22.96■■□□□ 1.27
VAT1-205ENST00000587173 VPS72Q15906 364 aa22.96■■□□□ 1.27
VAT1-205ENST00000587173 CCDC125Q86Z20 511 aa22.96■■□□□ 1.27
VAT1-205ENST00000587173 TULP4Q9NRJ4 1543 aa22.96■■□□□ 1.27
VAT1-205ENST00000587173 GPRASP1Q5JY77 1395 aa22.95■■□□□ 1.26
VAT1-205ENST00000587173 CCDC9Q9Y3X0 531 aaKnown RBP22.94■■□□□ 1.26
VAT1-205ENST00000587173 ABCA3Q99758 1704 aa22.94■■□□□ 1.26
VAT1-205ENST00000587173 FAM83GA6ND36 823 aa22.92■■□□□ 1.26
VAT1-205ENST00000587173 SEPT12Q8IYM1 358 aa22.92■■□□□ 1.26
VAT1-205ENST00000587173 PLCH1Q4KWH8 1693 aa22.92■■□□□ 1.26
VAT1-205ENST00000587173 EP400Q96L91 3159 aa22.91■■□□□ 1.26
VAT1-205ENST00000587173 TRPM3Q9HCF6 1732 aaPredicted RBP22.91■■□□□ 1.26
VAT1-205ENST00000587173 NGDNQ8NEJ9 315 aaKnown RBP22.9■■□□□ 1.26
VAT1-205ENST00000587173 ZRANB1Q9UGI0 708 aa22.9■■□□□ 1.26
VAT1-205ENST00000587173 NWD2Q9ULI1 1742 aa22.89■■□□□ 1.26
VAT1-205ENST00000587173 BLMP54132 1417 aaPredicted RBP22.89■■□□□ 1.25
VAT1-205ENST00000587173 ONECUT3O60422 494 aaPredicted RBP22.87■■□□□ 1.25
VAT1-205ENST00000587173 ALS2Q96Q42 1657 aa22.87■■□□□ 1.25
VAT1-205ENST00000587173 PAK3O75914 559 aaPredicted RBP22.86■■□□□ 1.25
VAT1-205ENST00000587173 BTG4Q9NY30 223 aa22.86■■□□□ 1.25
VAT1-205ENST00000587173 ATP7BP35670 1465 aa22.85■■□□□ 1.25
VAT1-205ENST00000587173 ARHGEF28Q8N1W1 1705 aaKnown RBP22.85■■□□□ 1.25
VAT1-205ENST00000587173 A0A0G2JS52 829 aa22.84■■□□□ 1.25
VAT1-205ENST00000587173 MYT1Q01538 1121 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms