RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 ADGRF5Q8IZF2 1346 aa24.59■■□□□ 1.53
NPC1-205ENST00000587163 ESCO1Q5FWF5 840 aa24.58■■□□□ 1.53
NPC1-205ENST00000587163 COL22A1Q8NFW1 1626 aaPredicted RBP24.57■■□□□ 1.52
NPC1-205ENST00000587163 TRPC5Q9UL62 973 aaPredicted RBP24.56■■□□□ 1.52
NPC1-205ENST00000587163 XPCQ01831 940 aaPredicted RBP24.55■■□□□ 1.52
NPC1-205ENST00000587163 RGL3Q3MIN7 710 aa24.55■■□□□ 1.52
NPC1-205ENST00000587163 WAPLQ7Z5K2 1190 aa24.55■■□□□ 1.52
NPC1-205ENST00000587163 STK26Q9P289 416 aa24.55■■□□□ 1.52
NPC1-205ENST00000587163 CDC42BPGQ6DT37 1551 aa24.54■■□□□ 1.52
NPC1-205ENST00000587163 PXDNQ92626 1479 aa24.54■■□□□ 1.52
NPC1-205ENST00000587163 FOXO3O43524 673 aa24.54■■□□□ 1.52
NPC1-205ENST00000587163 NPHP3Q7Z494 1330 aa24.54■■□□□ 1.52
NPC1-205ENST00000587163 MYOM2P54296 1465 aa24.53■■□□□ 1.52
NPC1-205ENST00000587163 ATRNO75882 1429 aa24.52■■□□□ 1.52
NPC1-205ENST00000587163 NUTM2FA1L443 756 aa24.52■■□□□ 1.52
NPC1-205ENST00000587163 TMEM132EQ6IEE7 984 aa24.51■■□□□ 1.51
NPC1-205ENST00000587163 ATAD2Q6PL18 1390 aa24.51■■□□□ 1.51
NPC1-205ENST00000587163 SPATA31E1Q6ZUB1 1445 aa24.51■■□□□ 1.51
NPC1-205ENST00000587163 BCL9LQ86UU0 1499 aa24.5■■□□□ 1.51
NPC1-205ENST00000587163 LRPPRCP42704 1394 aaKnown RBP24.49■■□□□ 1.51
NPC1-205ENST00000587163 PLEKHH1Q9ULM0 1364 aa24.49■■□□□ 1.51
NPC1-205ENST00000587163 CCDC144AA2RUR9 1427 aa24.49■■□□□ 1.51
NPC1-205ENST00000587163 TECPR2O15040 1411 aa24.49■■□□□ 1.51
NPC1-205ENST00000587163 MPHOSPH9Q99550 1183 aa24.47■■□□□ 1.51
NPC1-205ENST00000587163 IFT172Q9UG01 1749 aa24.47■■□□□ 1.51
NPC1-205ENST00000587163 ABCC11Q96J66 1382 aa24.46■■□□□ 1.51
NPC1-205ENST00000587163 ANKRD30BQ9BXX2 1392 aa24.46■■□□□ 1.51
NPC1-205ENST00000587163 MARF1Q9Y4F3 1742 aaKnown RBP24.45■■□□□ 1.5
NPC1-205ENST00000587163 GJD4Q96KN9 370 aaPredicted RBP24.42■■□□□ 1.5
NPC1-205ENST00000587163 PIK3C2GO75747 1445 aa24.42■■□□□ 1.5
NPC1-205ENST00000587163 KNDC1Q76NI1 1749 aa24.41■■□□□ 1.5
NPC1-205ENST00000587163 SPATA31A3Q5VYP0 1347 aa24.4■■□□□ 1.5
NPC1-205ENST00000587163 YTHDC2Q9H6S0 1430 aaKnown RBP24.4■■□□□ 1.5
NPC1-205ENST00000587163 FMN2Q9NZ56 1722 aa24.4■■□□□ 1.5
NPC1-205ENST00000587163 EP400Q96L91 3159 aa24.39■■□□□ 1.49
NPC1-205ENST00000587163 SRCAPQ6ZRS2 3230 aa24.39■■□□□ 1.49
NPC1-205ENST00000587163 KRT28Q7Z3Y7 464 aa24.37■■□□□ 1.49
NPC1-205ENST00000587163 UNC5CLQ8IV45 518 aa24.36■■□□□ 1.49
NPC1-205ENST00000587163 SIRT1Q96EB6 747 aa24.36■■□□□ 1.49
NPC1-205ENST00000587163 C14orf93Q9H972 538 aaKnown RBP24.35■■□□□ 1.49
NPC1-205ENST00000587163 SLIT2O94813 1529 aa24.35■■□□□ 1.49
NPC1-205ENST00000587163 KIF1AQ12756 1690 aa24.34■■□□□ 1.49
NPC1-205ENST00000587163 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.34■■□□□ 1.49
NPC1-205ENST00000587163 RGPD8O14715 1765 aaPredicted RBP24.34■■□□□ 1.49
NPC1-205ENST00000587163 CFAP70Q5T0N1 1121 aa24.33■■□□□ 1.49
NPC1-205ENST00000587163 CCDC125Q86Z20 511 aa24.33■■□□□ 1.49
NPC1-205ENST00000587163 GLI3P10071 1580 aa24.33■■□□□ 1.48
NPC1-205ENST00000587163 RALGAPBQ86X10 1494 aa24.32■■□□□ 1.48
NPC1-205ENST00000587163 ZRANB1Q9UGI0 708 aa24.32■■□□□ 1.48
NPC1-205ENST00000587163 PHF8Q9UPP1 1060 aa24.32■■□□□ 1.48
NPC1-205ENST00000587163 CABLES1Q8TDN4 633 aa24.31■■□□□ 1.48
NPC1-205ENST00000587163 USP32Q8NFA0 1604 aa24.3■■□□□ 1.48
NPC1-205ENST00000587163 NRXN1Q9ULB1 1477 aa24.3■■□□□ 1.48
NPC1-205ENST00000587163 PLEKHG5O94827 1062 aa24.29■■□□□ 1.48
NPC1-205ENST00000587163 SAFB2Q14151 953 aaKnown RBP eCLIP24.29■■□□□ 1.48
NPC1-205ENST00000587163 DHX57Q6P158 1386 aaKnown RBP24.29■■□□□ 1.48
NPC1-205ENST00000587163 TNS3Q68CZ2 1445 aa24.27■■□□□ 1.48
NPC1-205ENST00000587163 PSME1Q06323 249 aa24.27■■□□□ 1.48
NPC1-205ENST00000587163 PRAM1Q96QH2 718 aa24.27■■□□□ 1.48
NPC1-205ENST00000587163 HAP1P54257 671 aaPredicted RBP24.25■■□□□ 1.47
NPC1-205ENST00000587163 BRWD3Q6RI45 1802 aa24.25■■□□□ 1.47
NPC1-205ENST00000587163 SEPT12Q8IYM1 358 aa24.24■■□□□ 1.47
NPC1-205ENST00000587163 SBNO1A3KN83 1393 aa24.24■■□□□ 1.47
NPC1-205ENST00000587163 VPS72Q15906 364 aa24.23■■□□□ 1.47
NPC1-205ENST00000587163 LMOD2Q6P5Q4 547 aa24.23■■□□□ 1.47
NPC1-205ENST00000587163 BLMP54132 1417 aaPredicted RBP24.22■■□□□ 1.47
NPC1-205ENST00000587163 PMFBP1Q8TBY8 1022 aa24.22■■□□□ 1.47
NPC1-205ENST00000587163 DEFB132Q7Z7B7 95 aa24.21■■□□□ 1.47
NPC1-205ENST00000587163 PLCH1Q4KWH8 1693 aa24.21■■□□□ 1.47
NPC1-205ENST00000587163 FAM83GA6ND36 823 aa24.2■■□□□ 1.46
NPC1-205ENST00000587163 ONECUT3O60422 494 aaPredicted RBP24.2■■□□□ 1.46
NPC1-205ENST00000587163 POGKQ9P215 609 aa24.2■■□□□ 1.46
NPC1-205ENST00000587163 ABCA3Q99758 1704 aa24.2■■□□□ 1.46
NPC1-205ENST00000587163 CCDC9Q9Y3X0 531 aaKnown RBP24.19■■□□□ 1.46
NPC1-205ENST00000587163 ARHGEF10O15013 1369 aa24.18■■□□□ 1.46
NPC1-205ENST00000587163 DLC1Q96QB1 1528 aa24.18■■□□□ 1.46
NPC1-205ENST00000587163 NWD2Q9ULI1 1742 aa24.18■■□□□ 1.46
NPC1-205ENST00000587163 ACIN1Q9UKV3 1341 aaKnown RBP24.16■■□□□ 1.46
NPC1-205ENST00000587163 HIRIP3Q9BW71 556 aaPredicted RBP24.16■■□□□ 1.46
NPC1-205ENST00000587163 ANKARQ7Z5J8 1434 aa24.16■■□□□ 1.46
NPC1-205ENST00000587163 ADGRB1O14514 1584 aa24.16■■□□□ 1.46
NPC1-205ENST00000587163 TRAK1Q9UPV9 953 aa24.15■■□□□ 1.46
NPC1-205ENST00000587163 KRT27Q7Z3Y8 459 aa24.14■■□□□ 1.45
NPC1-205ENST00000587163 ADGRB2O60241 1585 aa24.13■■□□□ 1.45
NPC1-205ENST00000587163 TRPM3Q9HCF6 1732 aaPredicted RBP24.13■■□□□ 1.45
NPC1-205ENST00000587163 MINK1Q8N4C8 1332 aaPredicted RBP24.12■■□□□ 1.45
NPC1-205ENST00000587163 PRR36Q9H6K5 1346 aa24.12■■□□□ 1.45
NPC1-205ENST00000587163 SF3B2Q13435 895 aaKnown RBP24.12■■□□□ 1.45
NPC1-205ENST00000587163 RAB3GAP2Q9H2M9 1393 aa24.12■■□□□ 1.45
NPC1-205ENST00000587163 KDM2AQ9Y2K7 1162 aa24.11■■□□□ 1.45
NPC1-205ENST00000587163 BTG4Q9NY30 223 aa24.1■■□□□ 1.45
NPC1-205ENST00000587163 NRAPQ86VF7 1730 aa24.09■■□□□ 1.45
NPC1-205ENST00000587163 ALS2Q96Q42 1657 aa24.08■■□□□ 1.45
NPC1-205ENST00000587163 FAM98CQ17RN3 349 aaKnown RBP24.08■■□□□ 1.45
NPC1-205ENST00000587163 WASLO00401 505 aaPredicted RBP24.07■■□□□ 1.44
NPC1-205ENST00000587163 DCAF11Q8TEB1 546 aa24.07■■□□□ 1.44
NPC1-205ENST00000587163 GPRASP1Q5JY77 1395 aa24.06■■□□□ 1.44
NPC1-205ENST00000587163 A0A0G2JS52 829 aa24.06■■□□□ 1.44
NPC1-205ENST00000587163 MYT1Q01538 1121 aa24.06■■□□□ 1.44
NPC1-205ENST00000587163 TULP4Q9NRJ4 1543 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms