RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 WAPLQ7Z5K2 1190 aa25.6■■□□□ 1.69
RETREG3-205ENST00000586870 POGKQ9P215 609 aa25.6■■□□□ 1.69
RETREG3-205ENST00000586870 SETD1AO15047 1707 aaKnown RBP25.6■■□□□ 1.69
RETREG3-205ENST00000586870 XRN1Q8IZH2 1706 aaKnown RBP25.6■■□□□ 1.69
RETREG3-205ENST00000586870 TRPM1Q7Z4N2 1603 aa25.6■■□□□ 1.69
RETREG3-205ENST00000586870 CADPS2Q86UW7 1296 aa25.59■■□□□ 1.69
RETREG3-205ENST00000586870 KIF7Q2M1P5 1343 aa25.59■■□□□ 1.69
RETREG3-205ENST00000586870 NBPF1Q3BBV0 1214 aa25.58■■□□□ 1.69
RETREG3-205ENST00000586870 SIRT1Q96EB6 747 aa25.58■■□□□ 1.69
RETREG3-205ENST00000586870 ASXL1Q8IXJ9 1541 aa25.56■■□□□ 1.68
RETREG3-205ENST00000586870 SAFB2Q14151 953 aaKnown RBP eCLIP25.55■■□□□ 1.68
RETREG3-205ENST00000586870 PRAM1Q96QH2 718 aa25.55■■□□□ 1.68
RETREG3-205ENST00000586870 SLAIN2Q9P270 581 aa25.55■■□□□ 1.68
RETREG3-205ENST00000586870 TECPR2O15040 1411 aa25.55■■□□□ 1.68
RETREG3-205ENST00000586870 ROCK2O75116 1388 aaKnown RBP25.54■■□□□ 1.68
RETREG3-205ENST00000586870 GPRASP1Q5JY77 1395 aa25.53■■□□□ 1.68
RETREG3-205ENST00000586870 ADGRB1O14514 1584 aa25.51■■□□□ 1.68
RETREG3-205ENST00000586870 FAM135BQ49AJ0 1406 aa25.51■■□□□ 1.67
RETREG3-205ENST00000586870 ADGRL3Q9HAR2 1447 aa25.51■■□□□ 1.67
RETREG3-205ENST00000586870 PLEKHH1Q9ULM0 1364 aa25.5■■□□□ 1.67
RETREG3-205ENST00000586870 XIRP1Q702N8 1843 aaKnown RBP25.49■■□□□ 1.67
RETREG3-205ENST00000586870 DCCP43146 1447 aa25.46■■□□□ 1.67
RETREG3-205ENST00000586870 KIAA1210Q9ULL0 1709 aa25.45■■□□□ 1.66
RETREG3-205ENST00000586870 DLC1Q96QB1 1528 aa25.45■■□□□ 1.66
RETREG3-205ENST00000586870 GTF3C3Q9Y5Q9 886 aa25.45■■□□□ 1.66
RETREG3-205ENST00000586870 ST20-MTHFSA0A0A6YYL1 179 aa25.44■■□□□ 1.66
RETREG3-205ENST00000586870 KNDC1Q76NI1 1749 aa25.43■■□□□ 1.66
RETREG3-205ENST00000586870 MINK1Q8N4C8 1332 aaPredicted RBP25.43■■□□□ 1.66
RETREG3-205ENST00000586870 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.42■■□□□ 1.66
RETREG3-205ENST00000586870 NUTM2FA1L443 756 aa25.41■■□□□ 1.66
RETREG3-205ENST00000586870 CENPJQ9HC77 1338 aaPredicted RBP25.38■■□□□ 1.65
RETREG3-205ENST00000586870 HSPA1LP34931 641 aa25.38■■□□□ 1.65
RETREG3-205ENST00000586870 PRKRIP1Q9H875 184 aaPredicted RBP25.37■■□□□ 1.65
RETREG3-205ENST00000586870 EIF3AQ14152 1382 aaKnown RBP25.37■■□□□ 1.65
RETREG3-205ENST00000586870 NALCNQ8IZF0 1738 aa25.37■■□□□ 1.65
RETREG3-205ENST00000586870 MST1RQ04912 1400 aa25.36■■□□□ 1.65
RETREG3-205ENST00000586870 ESCO1Q5FWF5 840 aa25.36■■□□□ 1.65
RETREG3-205ENST00000586870 BRINP3Q76B58 766 aa25.35■■□□□ 1.65
RETREG3-205ENST00000586870 WASLO00401 505 aaPredicted RBP25.34■■□□□ 1.65
RETREG3-205ENST00000586870 C1orf167Q5SNV9 1468 aa25.33■■□□□ 1.65
RETREG3-205ENST00000586870 ORAI2Q96SN7 254 aa25.33■■□□□ 1.65
RETREG3-205ENST00000586870 POLR3GLQ9BT43 218 aa25.32■■□□□ 1.64
RETREG3-205ENST00000586870 CDC42BPGQ6DT37 1551 aa25.31■■□□□ 1.64
RETREG3-205ENST00000586870 CDK19Q9BWU1 502 aa25.29■■□□□ 1.64
RETREG3-205ENST00000586870 ROBO1Q9Y6N7 1651 aa25.28■■□□□ 1.64
RETREG3-205ENST00000586870 ARHGEF28Q8N1W1 1705 aaKnown RBP25.27■■□□□ 1.64
RETREG3-205ENST00000586870 SRPK2P78362 688 aaKnown RBP25.26■■□□□ 1.63
RETREG3-205ENST00000586870 TESK2Q96S53 571 aa25.26■■□□□ 1.63
RETREG3-205ENST00000586870 EVC2Q86UK5 1308 aa25.24■■□□□ 1.63
RETREG3-205ENST00000586870 DDX17Q92841 729 aaKnown RBP25.23■■□□□ 1.63
RETREG3-205ENST00000586870 PHF8Q9UPP1 1060 aa25.23■■□□□ 1.63
RETREG3-205ENST00000586870 FOXO3O43524 673 aa25.22■■□□□ 1.63
RETREG3-205ENST00000586870 TMF1P82094 1093 aa25.22■■□□□ 1.63
RETREG3-205ENST00000586870 NUDT16Q96DE0 195 aaKnown RBP25.22■■□□□ 1.63
RETREG3-205ENST00000586870 ADGRB2O60241 1585 aa25.2■■□□□ 1.63
RETREG3-205ENST00000586870 ANKARQ7Z5J8 1434 aa25.2■■□□□ 1.63
RETREG3-205ENST00000586870 PMFBP1Q8TBY8 1022 aa25.2■■□□□ 1.62
RETREG3-205ENST00000586870 CABP2Q9NPB3 220 aa25.2■■□□□ 1.62
RETREG3-205ENST00000586870 NPHP3Q7Z494 1330 aa25.19■■□□□ 1.62
RETREG3-205ENST00000586870 SLC24A1O60721 1099 aa25.18■■□□□ 1.62
RETREG3-205ENST00000586870 LRRC59Q96AG4 307 aaKnown RBP25.18■■□□□ 1.62
RETREG3-205ENST00000586870 FMN2Q9NZ56 1722 aa25.17■■□□□ 1.62
RETREG3-205ENST00000586870 KTN1Q86UP2 1357 aaKnown RBP25.17■■□□□ 1.62
RETREG3-205ENST00000586870 PRR36Q9H6K5 1346 aa25.17■■□□□ 1.62
RETREG3-205ENST00000586870 PSME1Q06323 249 aa25.17■■□□□ 1.62
RETREG3-205ENST00000586870 CCDC61Q9Y6R9 512 aa25.17■■□□□ 1.62
RETREG3-205ENST00000586870 DISP3Q9P2K9 1392 aa25.17■■□□□ 1.62
RETREG3-205ENST00000586870 NGDNQ8NEJ9 315 aaKnown RBP25.16■■□□□ 1.62
RETREG3-205ENST00000586870 MRS2Q9HD23 443 aa25.16■■□□□ 1.62
RETREG3-205ENST00000586870 TULP4Q9NRJ4 1543 aa25.16■■□□□ 1.62
RETREG3-205ENST00000586870 XPCQ01831 940 aaPredicted RBP25.15■■□□□ 1.62
RETREG3-205ENST00000586870 CCDC184Q52MB2 194 aa25.15■■□□□ 1.62
RETREG3-205ENST00000586870 QRICH2Q9H0J4 1663 aa25.14■■□□□ 1.61
RETREG3-205ENST00000586870 KRT28Q7Z3Y7 464 aa25.13■■□□□ 1.61
RETREG3-205ENST00000586870 PHLPP1O60346 1717 aa25.13■■□□□ 1.61
RETREG3-205ENST00000586870 AHDC1Q5TGY3 1603 aaPredicted RBP25.12■■□□□ 1.61
RETREG3-205ENST00000586870 CDCA8Q53HL2 280 aa25.12■■□□□ 1.61
RETREG3-205ENST00000586870 JCADQ9P266 1359 aa25.12■■□□□ 1.61
RETREG3-205ENST00000586870 SBNO2Q9Y2G9 1366 aa25.12■■□□□ 1.61
RETREG3-205ENST00000586870 SOS2Q07890 1332 aaPredicted RBP25.11■■□□□ 1.61
RETREG3-205ENST00000586870 RALBP1Q15311 655 aa25.1■■□□□ 1.61
RETREG3-205ENST00000586870 CABP1Q9NZU7 370 aa25.08■■□□□ 1.6
RETREG3-205ENST00000586870 ATP7BP35670 1465 aa25.07■■□□□ 1.6
RETREG3-205ENST00000586870 HNRNPUQ00839 825 aaKnown RBP eCLIP25.07■■□□□ 1.6
RETREG3-205ENST00000586870 LMOD2Q6P5Q4 547 aa25.07■■□□□ 1.6
RETREG3-205ENST00000586870 PLEKHG3A1L390 1219 aa25.06■■□□□ 1.6
RETREG3-205ENST00000586870 PPIP5K1Q6PFW1 1433 aa25.06■■□□□ 1.6
RETREG3-205ENST00000586870 PER1O15534 1290 aaPredicted RBP25.05■■□□□ 1.6
RETREG3-205ENST00000586870 ACEP12821 1306 aa25.05■■□□□ 1.6
RETREG3-205ENST00000586870 ATAD2Q6PL18 1390 aa25.05■■□□□ 1.6
RETREG3-205ENST00000586870 USP32Q8NFA0 1604 aa25.05■■□□□ 1.6
RETREG3-205ENST00000586870 KIF1AQ12756 1690 aa25.05■■□□□ 1.6
RETREG3-205ENST00000586870 PAK3O75914 559 aaPredicted RBP25.04■■□□□ 1.6
RETREG3-205ENST00000586870 TMC1Q8TDI8 760 aa25.04■■□□□ 1.6
RETREG3-205ENST00000586870 MED1Q15648 1581 aaPredicted RBP25.04■■□□□ 1.6
RETREG3-205ENST00000586870 COL16A1Q07092 1604 aaPredicted RBP25.04■■□□□ 1.6
RETREG3-205ENST00000586870 NHSL1Q5SYE7 1610 aa25.04■■□□□ 1.6
RETREG3-205ENST00000586870 NUTM2BA6NNL0 878 aaPredicted RBP25.03■■□□□ 1.6
RETREG3-205ENST00000586870 NUTM2EB1AL46 878 aaPredicted RBP25.03■■□□□ 1.6
RETREG3-205ENST00000586870 NUTM2AQ8IVF1 878 aaPredicted RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms