RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 EIF3AQ14152 1382 aaKnown RBP20.07■□□□□ 0.8
TPM4-205ENST00000586833 PLEKHH1Q9ULM0 1364 aa20.07■□□□□ 0.8
TPM4-205ENST00000586833 XIRP1Q702N8 1843 aaKnown RBP20.06■□□□□ 0.8
TPM4-205ENST00000586833 NBPF1Q3BBV0 1214 aa20.06■□□□□ 0.8
TPM4-205ENST00000586833 KIAA1210Q9ULL0 1709 aa20.06■□□□□ 0.8
TPM4-205ENST00000586833 MST1RQ04912 1400 aa20.05■□□□□ 0.8
TPM4-205ENST00000586833 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.05■□□□□ 0.8
TPM4-205ENST00000586833 CDC42BPGQ6DT37 1551 aa20.03■□□□□ 0.8
TPM4-205ENST00000586833 BRINP3Q76B58 766 aa20.02■□□□□ 0.8
TPM4-205ENST00000586833 CARD11Q9BXL7 1154 aa20.02■□□□□ 0.8
TPM4-205ENST00000586833 C1orf167Q5SNV9 1468 aa20.02■□□□□ 0.8
TPM4-205ENST00000586833 NBPF8Q3BBV2 869 aa20.01■□□□□ 0.79
TPM4-205ENST00000586833 MINK1Q8N4C8 1332 aaPredicted RBP20.01■□□□□ 0.79
TPM4-205ENST00000586833 CENPJQ9HC77 1338 aaPredicted RBP20.01■□□□□ 0.79
TPM4-205ENST00000586833 ESCO1Q5FWF5 840 aa20■□□□□ 0.79
TPM4-205ENST00000586833 NALCNQ8IZF0 1738 aa19.99■□□□□ 0.79
TPM4-205ENST00000586833 GPRASP1Q5JY77 1395 aa19.98■□□□□ 0.79
TPM4-205ENST00000586833 ROBO1Q9Y6N7 1651 aa19.97■□□□□ 0.79
TPM4-205ENST00000586833 WASLO00401 505 aaPredicted RBP19.97■□□□□ 0.79
TPM4-205ENST00000586833 HIRIP3Q9BW71 556 aaPredicted RBP19.97■□□□□ 0.79
TPM4-205ENST00000586833 RALGAPBQ86X10 1494 aa19.97■□□□□ 0.79
TPM4-205ENST00000586833 NUTM2FA1L443 756 aa19.96■□□□□ 0.79
TPM4-205ENST00000586833 NPHP3Q7Z494 1330 aa19.96■□□□□ 0.79
TPM4-205ENST00000586833 ANKARQ7Z5J8 1434 aa19.95■□□□□ 0.78
TPM4-205ENST00000586833 SLC24A1O60721 1099 aa19.95■□□□□ 0.78
TPM4-205ENST00000586833 ORAI2Q96SN7 254 aa19.94■□□□□ 0.78
TPM4-205ENST00000586833 TRPM1Q7Z4N2 1603 aa19.94■□□□□ 0.78
TPM4-205ENST00000586833 ADGRB2O60241 1585 aa19.93■□□□□ 0.78
TPM4-205ENST00000586833 LRRC59Q96AG4 307 aaKnown RBP19.93■□□□□ 0.78
TPM4-205ENST00000586833 JCADQ9P266 1359 aa19.92■□□□□ 0.78
TPM4-205ENST00000586833 CDK19Q9BWU1 502 aa19.91■□□□□ 0.78
TPM4-205ENST00000586833 PHF8Q9UPP1 1060 aa19.91■□□□□ 0.78
TPM4-205ENST00000586833 EVC2Q86UK5 1308 aa19.91■□□□□ 0.78
TPM4-205ENST00000586833 AHDC1Q5TGY3 1603 aaPredicted RBP19.91■□□□□ 0.78
TPM4-205ENST00000586833 SRPK2P78362 688 aaKnown RBP19.9■□□□□ 0.78
TPM4-205ENST00000586833 PSME1Q06323 249 aa19.89■□□□□ 0.77
TPM4-205ENST00000586833 ARHGEF28Q8N1W1 1705 aaKnown RBP19.88■□□□□ 0.77
TPM4-205ENST00000586833 TULP4Q9NRJ4 1543 aa19.88■□□□□ 0.77
TPM4-205ENST00000586833 FOXO3O43524 673 aa19.87■□□□□ 0.77
TPM4-205ENST00000586833 NUDT16Q96DE0 195 aaKnown RBP19.87■□□□□ 0.77
TPM4-205ENST00000586833 SOS2Q07890 1332 aaPredicted RBP19.86■□□□□ 0.77
TPM4-205ENST00000586833 SPATA31A6Q5VVP1 1343 aa19.86■□□□□ 0.77
TPM4-205ENST00000586833 CCDC61Q9Y6R9 512 aa19.86■□□□□ 0.77
TPM4-205ENST00000586833 FMN2Q9NZ56 1722 aa19.85■□□□□ 0.77
TPM4-205ENST00000586833 NGDNQ8NEJ9 315 aaKnown RBP19.85■□□□□ 0.77
TPM4-205ENST00000586833 PHLPP1O60346 1717 aa19.85■□□□□ 0.77
TPM4-205ENST00000586833 SBNO2Q9Y2G9 1366 aa19.84■□□□□ 0.77
TPM4-205ENST00000586833 KRT28Q7Z3Y7 464 aa19.83■□□□□ 0.77
TPM4-205ENST00000586833 PMFBP1Q8TBY8 1022 aa19.83■□□□□ 0.77
TPM4-205ENST00000586833 DDX17Q92841 729 aaKnown RBP19.83■□□□□ 0.77
TPM4-205ENST00000586833 KIF1AQ12756 1690 aa19.82■□□□□ 0.76
TPM4-205ENST00000586833 PRR36Q9H6K5 1346 aa19.81■□□□□ 0.76
TPM4-205ENST00000586833 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
TPM4-205ENST00000586833 CABP2Q9NPB3 220 aa19.81■□□□□ 0.76
TPM4-205ENST00000586833 USP47Q96K76 1375 aa19.81■□□□□ 0.76
TPM4-205ENST00000586833 COL16A1Q07092 1604 aaPredicted RBP19.8■□□□□ 0.76
TPM4-205ENST00000586833 ATAD2Q6PL18 1390 aa19.8■□□□□ 0.76
TPM4-205ENST00000586833 NHSL1Q5SYE7 1610 aa19.8■□□□□ 0.76
TPM4-205ENST00000586833 ST20-MTHFSA0A0A6YYL1 179 aa19.79■□□□□ 0.76
TPM4-205ENST00000586833 MEX3CQ5U5Q3 659 aaKnown RBP19.79■□□□□ 0.76
TPM4-205ENST00000586833 ATP7BP35670 1465 aa19.79■□□□□ 0.76
TPM4-205ENST00000586833 PLEKHG3A1L390 1219 aa19.78■□□□□ 0.76
TPM4-205ENST00000586833 XPCQ01831 940 aaPredicted RBP19.78■□□□□ 0.76
TPM4-205ENST00000586833 CDCA8Q53HL2 280 aa19.78■□□□□ 0.76
TPM4-205ENST00000586833 TMF1P82094 1093 aa19.77■□□□□ 0.76
TPM4-205ENST00000586833 PUS7Q96PZ0 661 aaKnown RBP19.77■□□□□ 0.76
TPM4-205ENST00000586833 SBNO1A3KN83 1393 aa19.77■□□□□ 0.76
TPM4-205ENST00000586833 QRICH2Q9H0J4 1663 aa19.76■□□□□ 0.75
TPM4-205ENST00000586833 DISP3Q9P2K9 1392 aa19.76■□□□□ 0.75
TPM4-205ENST00000586833 PXDNQ92626 1479 aa19.75■□□□□ 0.75
TPM4-205ENST00000586833 ARHGEF10O15013 1369 aa19.75■□□□□ 0.75
TPM4-205ENST00000586833 PNPLA6Q8IY17 1366 aa19.75■□□□□ 0.75
TPM4-205ENST00000586833 LMOD2Q6P5Q4 547 aa19.75■□□□□ 0.75
TPM4-205ENST00000586833 PPIP5K1Q6PFW1 1433 aa19.75■□□□□ 0.75
TPM4-205ENST00000586833 SPATA31A3Q5VYP0 1347 aa19.75■□□□□ 0.75
TPM4-205ENST00000586833 NUTM2BA6NNL0 878 aaPredicted RBP19.74■□□□□ 0.75
TPM4-205ENST00000586833 NUTM2EB1AL46 878 aaPredicted RBP19.74■□□□□ 0.75
TPM4-205ENST00000586833 EIF4G2P78344 907 aaKnown RBP eCLIP19.74■□□□□ 0.753e-9■■■□□ 15.5
TPM4-205ENST00000586833 NUTM2AQ8IVF1 878 aaPredicted RBP19.74■□□□□ 0.75
TPM4-205ENST00000586833 ACEP12821 1306 aa19.74■□□□□ 0.75
TPM4-205ENST00000586833 PAK3O75914 559 aaPredicted RBP19.73■□□□□ 0.75
TPM4-205ENST00000586833 HAP1P54257 671 aaPredicted RBP19.73■□□□□ 0.75
TPM4-205ENST00000586833 ZNF692Q9BU19 519 aaPredicted RBP19.73■□□□□ 0.75
TPM4-205ENST00000586833 CABP1Q9NZU7 370 aa19.73■□□□□ 0.75
TPM4-205ENST00000586833 TNS3Q68CZ2 1445 aa19.73■□□□□ 0.75
TPM4-205ENST00000586833 POLR3AO14802 1390 aaPredicted RBP19.72■□□□□ 0.75
TPM4-205ENST00000586833 BRD4O60885 1362 aaPredicted RBP19.72■□□□□ 0.75
TPM4-205ENST00000586833 MED1Q15648 1581 aaPredicted RBP19.71■□□□□ 0.75
TPM4-205ENST00000586833 USP32Q8NFA0 1604 aa19.71■□□□□ 0.75
TPM4-205ENST00000586833 TMC1Q8TDI8 760 aa19.7■□□□□ 0.74
TPM4-205ENST00000586833 TESK2Q96S53 571 aa19.7■□□□□ 0.74
TPM4-205ENST00000586833 NINLQ9Y2I6 1382 aa19.7■□□□□ 0.74
TPM4-205ENST00000586833 SHPRHQ149N8 1683 aa19.69■□□□□ 0.74
TPM4-205ENST00000586833 ITSN1Q15811 1721 aa19.69■□□□□ 0.74
TPM4-205ENST00000586833 HDGFL2Q7Z4V5 671 aaPredicted RBP19.69■□□□□ 0.74
TPM4-205ENST00000586833 TERF2IPQ9NYB0 399 aa19.67■□□□□ 0.74
TPM4-205ENST00000586833 ADAMTS2O95450 1211 aa19.65■□□□□ 0.74
TPM4-205ENST00000586833 ZNF772Q68DY9 489 aaPredicted RBP19.65■□□□□ 0.74
TPM4-205ENST00000586833 ABTB2Q8N961 1025 aa19.63■□□□□ 0.73
TPM4-205ENST00000586833 TOPAZ1Q8N9V7 1692 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms