RNA–Protein interactions for RNA: ENST00000586815.1

WIPI1-204, Transcript of WD repeat domain, phosphoinositide interacting 1, human

TSL 3

Gene WIPI1, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WIPI1-204	ENST00000586815	DHX57	Q6P158	1386 aa	Known RBP	32.8	■■■□□ 2.84
WIPI1-204	ENST00000586815	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.79	■■■□□ 2.84
WIPI1-204	ENST00000586815	TMEM132E	Q6IEE7	984 aa		32.79	■■■□□ 2.84
WIPI1-204	ENST00000586815	ZNF772	Q68DY9	489 aa	Predicted RBP	32.77	■■■□□ 2.84
WIPI1-204	ENST00000586815	POTEA	Q6S8J7	498 aa		32.74	■■■□□ 2.83
WIPI1-204	ENST00000586815	WAPL	Q7Z5K2	1190 aa		32.73	■■■□□ 2.83
WIPI1-204	ENST00000586815	ORAI2	Q96SN7	254 aa		32.73	■■■□□ 2.83
WIPI1-204	ENST00000586815	LRP6	O75581	1613 aa		32.73	■■■□□ 2.83
WIPI1-204	ENST00000586815	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.71	■■■□□ 2.83
WIPI1-204	ENST00000586815	NUTM2E	B1AL46	878 aa	Predicted RBP	32.71	■■■□□ 2.83
WIPI1-204	ENST00000586815	CFAP70	Q5T0N1	1121 aa		32.71	■■■□□ 2.83
WIPI1-204	ENST00000586815	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.71	■■■□□ 2.83
WIPI1-204	ENST00000586815	SOS2	Q07890	1332 aa	Predicted RBP	32.71	■■■□□ 2.83
WIPI1-204	ENST00000586815	NPHP3	Q7Z494	1330 aa		32.71	■■■□□ 2.83
WIPI1-204	ENST00000586815	ESCO1	Q5FWF5	840 aa		32.7	■■■□□ 2.83
WIPI1-204	ENST00000586815	PNPLA6	Q8IY17	1366 aa		32.69	■■■□□ 2.82
WIPI1-204	ENST00000586815	DDX17	Q92841	729 aa	Known RBP	32.68	■■■□□ 2.82
WIPI1-204	ENST00000586815	DCAF11	Q8TEB1	546 aa		32.66	■■■□□ 2.82
WIPI1-204	ENST00000586815	PLEKHH1	Q9ULM0	1364 aa		32.63	■■■□□ 2.81
WIPI1-204	ENST00000586815	KDM2A	Q9Y2K7	1162 aa		32.62	■■■□□ 2.81
WIPI1-204	ENST00000586815	DLC1	Q96QB1	1528 aa		32.61	■■■□□ 2.81
WIPI1-204	ENST00000586815	POGK	Q9P215	609 aa		32.61	■■■□□ 2.81
WIPI1-204	ENST00000586815	FMN2	Q9NZ56	1722 aa		32.59	■■■□□ 2.81
WIPI1-204	ENST00000586815	PRAM1	Q96QH2	718 aa		32.58	■■■□□ 2.81
WIPI1-204	ENST00000586815	FOXO3	O43524	673 aa		32.56	■■■□□ 2.8
WIPI1-204	ENST00000586815	KIF1A	Q12756	1690 aa		32.56	■■■□□ 2.8
WIPI1-204	ENST00000586815	AFF2	P51816	1311 aa		32.55	■■■□□ 2.8
WIPI1-204	ENST00000586815	NUTM2F	A1L443	756 aa		32.55	■■■□□ 2.8
WIPI1-204	ENST00000586815	RXRB	P28702	533 aa		32.53	■■■□□ 2.8
WIPI1-204	ENST00000586815	C8orf37	Q96NL8	207 aa		32.53	■■■□□ 2.8
WIPI1-204	ENST00000586815	ADGRB1	O14514	1584 aa		32.53	■■■□□ 2.8
WIPI1-204	ENST00000586815	PXDN	Q92626	1479 aa		32.51	■■■□□ 2.79
WIPI1-204	ENST00000586815	EIF3A	Q14152	1382 aa	Known RBP	32.51	■■■□□ 2.79
WIPI1-204	ENST00000586815	NGLY1	Q96IV0	654 aa		32.5	■■■□□ 2.79
WIPI1-204	ENST00000586815	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.5	■■■□□ 2.79
WIPI1-204	ENST00000586815	TRAK1	Q9UPV9	953 aa		32.49	■■■□□ 2.79
WIPI1-204	ENST00000586815	ADAMTS2	O95450	1211 aa		32.48	■■■□□ 2.79
WIPI1-204	ENST00000586815	PSME1	Q06323	249 aa		32.48	■■■□□ 2.79
WIPI1-204	ENST00000586815	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.48	■■■□□ 2.79
WIPI1-204	ENST00000586815	PHF8	Q9UPP1	1060 aa		32.47	■■■□□ 2.79
WIPI1-204	ENST00000586815	ANKAR	Q7Z5J8	1434 aa		32.46	■■■□□ 2.79
WIPI1-204	ENST00000586815	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.45	■■■□□ 2.79
WIPI1-204	ENST00000586815	ADGRB2	O60241	1585 aa		32.45	■■■□□ 2.78
WIPI1-204	ENST00000586815	XPC	Q01831	940 aa	Predicted RBP	32.42	■■■□□ 2.78
WIPI1-204	ENST00000586815	KRT28	Q7Z3Y7	464 aa		32.42	■■■□□ 2.78
WIPI1-204	ENST00000586815	QTRT2	Q9H974	415 aa	Known RBP	32.42	■■■□□ 2.78
WIPI1-204	ENST00000586815	RBM6	P78332	1123 aa	Known RBP	32.41	■■■□□ 2.78
WIPI1-204	ENST00000586815	SPATA31A3	Q5VYP0	1347 aa		32.4	■■■□□ 2.78
WIPI1-204	ENST00000586815	KIAA1210	Q9ULL0	1709 aa		32.38	■■■□□ 2.77
WIPI1-204	ENST00000586815	RGPD8	O14715	1765 aa	Predicted RBP	32.37	■■■□□ 2.77
WIPI1-204	ENST00000586815	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.37	■■■□□ 2.77
WIPI1-204	ENST00000586815	USP21	Q9UK80	565 aa		32.37	■■■□□ 2.77
WIPI1-204	ENST00000586815	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.36	■■■□□ 2.77
WIPI1-204	ENST00000586815	TRPC5	Q9UL62	973 aa	Predicted RBP	32.36	■■■□□ 2.77
WIPI1-204	ENST00000586815	SBNO1	A3KN83	1393 aa		32.34	■■■□□ 2.77
WIPI1-204	ENST00000586815	WASL	O00401	505 aa	Predicted RBP	32.34	■■■□□ 2.77
WIPI1-204	ENST00000586815	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.33	■■■□□ 2.77
WIPI1-204	ENST00000586815	TNS3	Q68CZ2	1445 aa		32.33	■■■□□ 2.77
WIPI1-204	ENST00000586815	ARHGEF10	O15013	1369 aa		32.32	■■■□□ 2.77
WIPI1-204	ENST00000586815	TULP4	Q9NRJ4	1543 aa		32.31	■■■□□ 2.76
WIPI1-204	ENST00000586815	HAP1	P54257	671 aa	Predicted RBP	32.31	■■■□□ 2.76
WIPI1-204	ENST00000586815	MARF1	Q9Y4F3	1742 aa	Known RBP	32.31	■■■□□ 2.76
WIPI1-204	ENST00000586815	GPRASP1	Q5JY77	1395 aa		32.31	■■■□□ 2.76
WIPI1-204	ENST00000586815	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.29	■■■□□ 2.76
WIPI1-204	ENST00000586815	USP32	Q8NFA0	1604 aa		32.27	■■■□□ 2.76
WIPI1-204	ENST00000586815	PMFBP1	Q8TBY8	1022 aa		32.27	■■■□□ 2.76
WIPI1-204	ENST00000586815	LMOD2	Q6P5Q4	547 aa		32.24	■■■□□ 2.75
WIPI1-204	ENST00000586815	NGDN	Q8NEJ9	315 aa	Known RBP	32.22	■■■□□ 2.75
WIPI1-204	ENST00000586815	ITSN1	Q15811	1721 aa		32.21	■■■□□ 2.75
WIPI1-204	ENST00000586815	ATRN	O75882	1429 aa		32.21	■■■□□ 2.75
WIPI1-204	ENST00000586815	PRR36	Q9H6K5	1346 aa		32.2	■■■□□ 2.74
WIPI1-204	ENST00000586815	RGS12	O14924	1447 aa		32.19	■■■□□ 2.74
WIPI1-204	ENST00000586815	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.18	■■■□□ 2.74
WIPI1-204	ENST00000586815	NUDT16	Q96DE0	195 aa	Known RBP	32.18	■■■□□ 2.74
WIPI1-204	ENST00000586815	BCL9L	Q86UU0	1499 aa		32.17	■■■□□ 2.74
WIPI1-204	ENST00000586815	L3MBTL2	Q969R5	705 aa		32.17	■■■□□ 2.74
WIPI1-204	ENST00000586815	NBPF1	Q3BBV0	1214 aa		32.16	■■■□□ 2.74
WIPI1-204	ENST00000586815	UNC5CL	Q8IV45	518 aa		32.16	■■■□□ 2.74
WIPI1-204	ENST00000586815	CDK19	Q9BWU1	502 aa		32.16	■■■□□ 2.74
WIPI1-204	ENST00000586815	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.15	■■■□□ 2.74
WIPI1-204	ENST00000586815	SLIT2	O94813	1529 aa		32.13	■■■□□ 2.73
WIPI1-204	ENST00000586815	ATP7B	P35670	1465 aa		32.13	■■■□□ 2.73
WIPI1-204	ENST00000586815	GJD4	Q96KN9	370 aa	Predicted RBP	32.13	■■■□□ 2.73
WIPI1-204	ENST00000586815	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.13	■■■□□ 2.73
WIPI1-204	ENST00000586815	CCDC61	Q9Y6R9	512 aa		32.13	■■■□□ 2.73
WIPI1-204	ENST00000586815	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.12	■■■□□ 2.73
WIPI1-204	ENST00000586815	NEUROD1	Q13562	356 aa		32.11	■■■□□ 2.73
WIPI1-204	ENST00000586815	SIN3A	Q96ST3	1273 aa		32.11	■■■□□ 2.73
WIPI1-204	ENST00000586815	ATAD2	Q6PL18	1390 aa		32.1	■■■□□ 2.73
WIPI1-204	ENST00000586815	CABLES1	Q8TDN4	633 aa		32.1	■■■□□ 2.73
WIPI1-204	ENST00000586815	PAK3	O75914	559 aa	Predicted RBP	32.09	■■■□□ 2.73
WIPI1-204	ENST00000586815	ALS2	Q96Q42	1657 aa		32.07	■■■□□ 2.72
WIPI1-204	ENST00000586815	NWD2	Q9ULI1	1742 aa		32.06	■■■□□ 2.72
WIPI1-204	ENST00000586815	ABCA3	Q99758	1704 aa		32.06	■■■□□ 2.72
WIPI1-204	ENST00000586815	PLEKHG5	O94827	1062 aa		32.05	■■■□□ 2.72
WIPI1-204	ENST00000586815	SRPK2	P78362	688 aa	Known RBP	32.05	■■■□□ 2.72
WIPI1-204	ENST00000586815	PLEKHG3	A1L390	1219 aa		32.04	■■■□□ 2.72
WIPI1-204	ENST00000586815	POLR3A	O14802	1390 aa	Predicted RBP	32.04	■■■□□ 2.72
WIPI1-204	ENST00000586815	TRIM26	Q12899	539 aa	Predicted RBP	32.02	■■■□□ 2.72
WIPI1-204	ENST00000586815	VPS72	Q15906	364 aa		32.02	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms