RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 AMER1Q5JTC6 1135 aaPredicted RBP10.6□□□□□ -0.71
ZNF540-204ENST00000586792 KIFC2Q96AC6 838 aa10.6□□□□□ -0.71
ZNF540-204ENST00000586792 TRIM47Q96LD4 638 aa10.6□□□□□ -0.71
ZNF540-204ENST00000586792 REPIN1Q9BWE0 567 aaKnown RBP10.59□□□□□ -0.71
ZNF540-204ENST00000586792 PRDM9Q9NQV7 894 aa10.59□□□□□ -0.71
ZNF540-204ENST00000586792 FAM181BA6NEQ2 426 aa10.58□□□□□ -0.72
ZNF540-204ENST00000586792 GNPATO15228 680 aa10.58□□□□□ -0.72
ZNF540-204ENST00000586792 SNRPBP14678 240 aaKnown RBP10.58□□□□□ -0.72
ZNF540-204ENST00000586792 TRIM32Q13049 653 aa10.58□□□□□ -0.72
ZNF540-204ENST00000586792 SEMA3EO15041 775 aa10.57□□□□□ -0.72
ZNF540-204ENST00000586792 FECHP22830 423 aa10.57□□□□□ -0.72
ZNF540-204ENST00000586792 Q3C1V9 767 aa10.57□□□□□ -0.72
ZNF540-204ENST00000586792 SMYD5Q6GMV2 418 aa10.56□□□□□ -0.72
ZNF540-204ENST00000586792 MRGPRX2Q96LB1 330 aa10.56□□□□□ -0.72
ZNF540-204ENST00000586792 TSHZ2Q9NRE2 1034 aa10.56□□□□□ -0.72
ZNF540-204ENST00000586792 SLC16A10Q8TF71 515 aa10.55□□□□□ -0.72
ZNF540-204ENST00000586792 J3QL48 77 aa10.53□□□□□ -0.72
ZNF540-204ENST00000586792 MMP16P51512 607 aa10.53□□□□□ -0.72
ZNF540-204ENST00000586792 RNF19BQ6ZMZ0 732 aa10.53□□□□□ -0.72
ZNF540-204ENST00000586792 HPS1Q92902 700 aa10.5□□□□□ -0.73
ZNF540-204ENST00000586792 RBM26Q5T8P6 1007 aaKnown RBP10.49□□□□□ -0.73
ZNF540-204ENST00000586792 LCE2CQ5TA81 110 aa10.49□□□□□ -0.73
ZNF540-204ENST00000586792 WNT7BP56706 349 aa10.48□□□□□ -0.73
ZNF540-204ENST00000586792 USB1Q9BQ65 265 aaKnown RBP10.48□□□□□ -0.73
ZNF540-204ENST00000586792 NLRP7Q8WX94 980 aa10.47□□□□□ -0.73
ZNF540-204ENST00000586792 DXOO77932 396 aaKnown RBP10.46□□□□□ -0.73
ZNF540-204ENST00000586792 RC3H1Q5TC82 1133 aaKnown RBP10.46□□□□□ -0.73
ZNF540-204ENST00000586792 NPAS3Q8IXF0 933 aa10.46□□□□□ -0.73
ZNF540-204ENST00000586792 NXF1Q9UBU9 619 aaKnown RBP10.46□□□□□ -0.73
ZNF540-204ENST00000586792 TESPA1A2RU30 521 aaPredicted RBP10.45□□□□□ -0.74
ZNF540-204ENST00000586792 CCDC24Q8N4L8 307 aa10.44□□□□□ -0.74
ZNF540-204ENST00000586792 IRF7Q92985 503 aa10.43□□□□□ -0.74
ZNF540-204ENST00000586792 PHOX2BQ99453 314 aa10.43□□□□□ -0.74
ZNF540-204ENST00000586792 ZSCAN1Q8NBB4 408 aa10.42□□□□□ -0.74
ZNF540-204ENST00000586792 GPR37O15354 613 aa10.41□□□□□ -0.74
ZNF540-204ENST00000586792 ALDH1A1P00352 501 aa10.41□□□□□ -0.74
ZNF540-204ENST00000586792 KDM4AO75164 1064 aa10.4□□□□□ -0.74
ZNF540-204ENST00000586792 USP46P62068 366 aa10.4□□□□□ -0.74
ZNF540-204ENST00000586792 CD46P15529 392 aa10.39□□□□□ -0.75
ZNF540-204ENST00000586792 SKOR1P84550 965 aa10.39□□□□□ -0.75
ZNF540-204ENST00000586792 RTN4Q9NQC3 1192 aaKnown RBP10.39□□□□□ -0.75
ZNF540-204ENST00000586792 GMPRP36959 345 aa10.38□□□□□ -0.75
ZNF540-204ENST00000586792 CAPN5O15484 640 aaPredicted RBP10.36□□□□□ -0.75
ZNF540-204ENST00000586792 WASF2Q9Y6W5 498 aa10.36□□□□□ -0.75
ZNF540-204ENST00000586792 EHBP1Q8NDI1 1231 aa10.35□□□□□ -0.75
ZNF540-204ENST00000586792 JUNDP17535 347 aa10.33□□□□□ -0.76
ZNF540-204ENST00000586792 GPIHBP1Q8IV16 184 aa10.33□□□□□ -0.76
ZNF540-204ENST00000586792 H3BM21 787 aa10.32□□□□□ -0.76
ZNF540-204ENST00000586792 SIAH2O43255 324 aa10.32□□□□□ -0.76
ZNF540-204ENST00000586792 BMP1P13497 986 aa10.31□□□□□ -0.76
ZNF540-204ENST00000586792 LORP23490 312 aaPredicted RBP10.31□□□□□ -0.76
ZNF540-204ENST00000586792 TRIM46Q7Z4K8 759 aa10.31□□□□□ -0.76
ZNF540-204ENST00000586792 HOXA2O43364 376 aa10.29□□□□□ -0.76
ZNF540-204ENST00000586792 NUDT12Q9BQG2 462 aa10.29□□□□□ -0.76
ZNF540-204ENST00000586792 LOC100996750A0A140TA64 210 aa10.28□□□□□ -0.76
ZNF540-204ENST00000586792 KRTAP4-6Q9BYQ5 205 aa10.28□□□□□ -0.76
ZNF540-204ENST00000586792 VEGFBP49765 207 aa10.27□□□□□ -0.77
ZNF540-204ENST00000586792 RETREG3Q86VR2 466 aa10.26□□□□□ -0.77
ZNF540-204ENST00000586792 HLA-CQ95604 372 aa10.26□□□□□ -0.77
ZNF540-204ENST00000586792 MAP2K5Q13163 448 aa10.25□□□□□ -0.77
ZNF540-204ENST00000586792 ZFP42Q96MM3 310 aa10.25□□□□□ -0.77
ZNF540-204ENST00000586792 PLEKHG3A1L390 1219 aa10.24□□□□□ -0.77
ZNF540-204ENST00000586792 PTCRAQ6ISU1 281 aaPredicted RBP10.24□□□□□ -0.77
ZNF540-204ENST00000586792 ERBB4Q15303 1308 aa10.24□□□□□ -0.77
ZNF540-204ENST00000586792 SCARF1Q14162 830 aa10.23□□□□□ -0.77
ZNF540-204ENST00000586792 SH3BP2P78314 561 aa10.22□□□□□ -0.77
ZNF540-204ENST00000586792 MDM2Q00987 491 aaPredicted RBP10.22□□□□□ -0.77
ZNF540-204ENST00000586792 NUTM1Q86Y26 1132 aa10.21□□□□□ -0.77
ZNF540-204ENST00000586792 SYMPKQ92797 1274 aaKnown RBP10.21□□□□□ -0.77
ZNF540-204ENST00000586792 IRF6O14896 467 aa10.2□□□□□ -0.78
ZNF540-204ENST00000586792 CCNYL3P0C7X3 344 aa10.2□□□□□ -0.78
ZNF540-204ENST00000586792 MS4A1P11836 297 aa10.2□□□□□ -0.78
ZNF540-204ENST00000586792 GUCA2AQ02747 115 aa10.2□□□□□ -0.78
ZNF540-204ENST00000586792 MPNDQ8N594 471 aa10.2□□□□□ -0.78
ZNF540-204ENST00000586792 MRPL14Q6P1L8 145 aaKnown RBP10.19□□□□□ -0.78
ZNF540-204ENST00000586792 MINK1Q8N4C8 1332 aaPredicted RBP10.18□□□□□ -0.78
ZNF540-204ENST00000586792 VARSP26640 1264 aaKnown RBP10.18□□□□□ -0.78
ZNF540-204ENST00000586792 VSIG8P0DPA2 414 aa10.17□□□□□ -0.78
ZNF540-204ENST00000586792 PTPRNQ16849 979 aa10.17□□□□□ -0.78
ZNF540-204ENST00000586792 C6orf229H3BNL8 230 aa10.16□□□□□ -0.78
ZNF540-204ENST00000586792 CLCN1P35523 988 aa10.16□□□□□ -0.78
ZNF540-204ENST00000586792 NNTQ13423 1086 aa10.16□□□□□ -0.78
ZNF540-204ENST00000586792 UNC93B1Q9H1C4 597 aa10.16□□□□□ -0.78
ZNF540-204ENST00000586792 GPCPD1Q9NPB8 672 aa10.16□□□□□ -0.78
ZNF540-204ENST00000586792 EVA1BQ9NVM1 165 aa10.16□□□□□ -0.78
ZNF540-204ENST00000586792 FDX1P10109 184 aa10.15□□□□□ -0.78
ZNF540-204ENST00000586792 SUZ12Q15022 739 aaKnown RBP10.15□□□□□ -0.78
ZNF540-204ENST00000586792 ADH1CP00326 375 aa10.14□□□□□ -0.79
ZNF540-204ENST00000586792 KCNMA1Q12791 1236 aa10.14□□□□□ -0.79
ZNF540-204ENST00000586792 BAP1Q92560 729 aa10.14□□□□□ -0.79
ZNF540-204ENST00000586792 PURBQ96QR8 312 aaKnown RBP10.14□□□□□ -0.79
ZNF540-204ENST00000586792 FAM217BQ9NTX9 383 aaPredicted RBP10.14□□□□□ -0.79
ZNF540-204ENST00000586792 TLL2Q9Y6L7 1015 aa10.14□□□□□ -0.79
ZNF540-204ENST00000586792 KRI1Q8N9T8 703 aaKnown RBP10.13□□□□□ -0.79
ZNF540-204ENST00000586792 TULP1O00294 542 aaPredicted RBP10.12□□□□□ -0.79
ZNF540-204ENST00000586792 WDR4P57081 412 aaKnown RBP10.12□□□□□ -0.79
ZNF540-204ENST00000586792 KCNH2Q12809 1159 aa10.12□□□□□ -0.79
ZNF540-204ENST00000586792 LINC01559Q495D7 138 aa10.12□□□□□ -0.79
ZNF540-204ENST00000586792 ZNF511Q8NB15 262 aa10.12□□□□□ -0.79
ZNF540-204ENST00000586792 TIMP2P16035 220 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms