RNA–Protein interactions for RNA: ENST00000586751.5

LAMA3-206, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 3,494 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-206ENST00000586751 SEC24BO95487 1268 aa11.71□□□□□ -0.53
LAMA3-206ENST00000586751 PPLO60437 1756 aa11.71□□□□□ -0.53
LAMA3-206ENST00000586751 RGS3P49796 1198 aa11.71□□□□□ -0.54
LAMA3-206ENST00000586751 DHX37Q8IY37 1157 aaKnown RBP11.71□□□□□ -0.54
LAMA3-206ENST00000586751 MYT1LQ9UL68 1186 aa11.71□□□□□ -0.54
LAMA3-206ENST00000586751 QRICH2Q9H0J4 1663 aa11.7□□□□□ -0.54
LAMA3-206ENST00000586751 PANK1Q8TE04 598 aa11.7□□□□□ -0.54
LAMA3-206ENST00000586751 IQSEC2Q5JU85 1478 aa11.7□□□□□ -0.54
LAMA3-206ENST00000586751 WWC1Q8IX03 1113 aa11.7□□□□□ -0.54
LAMA3-206ENST00000586751 TRAK1Q9UPV9 953 aa11.7□□□□□ -0.54
LAMA3-206ENST00000586751 NPATQ14207 1427 aa11.7□□□□□ -0.54
LAMA3-206ENST00000586751 ZNF518AQ6AHZ1 1483 aa11.69□□□□□ -0.54
LAMA3-206ENST00000586751 ASXL2Q76L83 1435 aa11.69□□□□□ -0.54
LAMA3-206ENST00000586751 NSD3Q9BZ95 1437 aa11.69□□□□□ -0.54
LAMA3-206ENST00000586751 RLBP1P12271 317 aa11.69□□□□□ -0.54
LAMA3-206ENST00000586751 NUTM2DQ5VT03 806 aaPredicted RBP11.69□□□□□ -0.54
LAMA3-206ENST00000586751 EIF3AQ14152 1382 aaKnown RBP11.69□□□□□ -0.54
LAMA3-206ENST00000586751 CDCA8Q53HL2 280 aa11.68□□□□□ -0.54
LAMA3-206ENST00000586751 SENP3Q9H4L4 574 aaPredicted RBP11.68□□□□□ -0.54
LAMA3-206ENST00000586751 VIRMAQ69YN4 1812 aaKnown RBP11.68□□□□□ -0.54
LAMA3-206ENST00000586751 POLR3AO14802 1390 aaPredicted RBP11.67□□□□□ -0.54
LAMA3-206ENST00000586751 LMTK2Q8IWU2 1503 aa11.67□□□□□ -0.54
LAMA3-206ENST00000586751 NEUROD2Q15784 382 aa11.67□□□□□ -0.54
LAMA3-206ENST00000586751 KANK1Q14678 1352 aa11.67□□□□□ -0.54
LAMA3-206ENST00000586751 FAM161AQ3B820 660 aa11.67□□□□□ -0.54
LAMA3-206ENST00000586751 COG6Q9Y2V7 657 aa11.67□□□□□ -0.54
LAMA3-206ENST00000586751 NLRP1Q9C000 1473 aa11.67□□□□□ -0.54
LAMA3-206ENST00000586751 HAP1P54257 671 aaPredicted RBP11.66□□□□□ -0.54
LAMA3-206ENST00000586751 RBM10P98175 930 aaKnown RBP11.66□□□□□ -0.54
LAMA3-206ENST00000586751 SETBP1Q9Y6X0 1596 aa11.66□□□□□ -0.54
LAMA3-206ENST00000586751 PHF23Q9BUL5 403 aaPredicted RBP11.66□□□□□ -0.54
LAMA3-206ENST00000586751 TULP4Q9NRJ4 1543 aa11.66□□□□□ -0.54
LAMA3-206ENST00000586751 SBNO2Q9Y2G9 1366 aa11.66□□□□□ -0.54
LAMA3-206ENST00000586751 E9PSI1 815 aa11.65□□□□□ -0.54
LAMA3-206ENST00000586751 STAC3Q96MF2 364 aa11.65□□□□□ -0.54
LAMA3-206ENST00000586751 CENPJQ9HC77 1338 aaPredicted RBP11.65□□□□□ -0.54
LAMA3-206ENST00000586751 NFKBIBQ15653 356 aa11.65□□□□□ -0.54
LAMA3-206ENST00000586751 RTL5Q5HYW3 569 aaPredicted RBP11.65□□□□□ -0.54
LAMA3-206ENST00000586751 BCL2L13Q9BXK5 485 aa11.65□□□□□ -0.54
LAMA3-206ENST00000586751 CHGAP10645 457 aaKnown RBP11.65□□□□□ -0.55
LAMA3-206ENST00000586751 C14orf93Q9H972 538 aaKnown RBP11.65□□□□□ -0.55
LAMA3-206ENST00000586751 PCDHB15Q9Y5E8 787 aa11.65□□□□□ -0.55
LAMA3-206ENST00000586751 TAF7LQ5H9L4 462 aa11.64□□□□□ -0.55
LAMA3-206ENST00000586751 ARHGEF28Q8N1W1 1705 aaKnown RBP11.64□□□□□ -0.55
LAMA3-206ENST00000586751 TCP11L2Q8N4U5 519 aa11.63□□□□□ -0.55
LAMA3-206ENST00000586751 PAXIP1Q6ZW49 1069 aaPredicted RBP11.63□□□□□ -0.55
LAMA3-206ENST00000586751 GLI2P10070 1586 aa11.63□□□□□ -0.55
LAMA3-206ENST00000586751 RARSP54136 660 aaKnown RBP11.63□□□□□ -0.55
LAMA3-206ENST00000586751 AAMPQ13685 434 aa11.63□□□□□ -0.55
LAMA3-206ENST00000586751 CAMSAP1Q5T5Y3 1602 aa11.62□□□□□ -0.55
LAMA3-206ENST00000586751 MTHFSP49914 203 aa11.62□□□□□ -0.55
LAMA3-206ENST00000586751 GGT6Q6P531 493 aa11.62□□□□□ -0.55
LAMA3-206ENST00000586751 HECW2Q9P2P5 1572 aa11.62□□□□□ -0.55
LAMA3-206ENST00000586751 ABCC3O15438 1527 aa11.61□□□□□ -0.55
LAMA3-206ENST00000586751 USP32Q8NFA0 1604 aa11.61□□□□□ -0.55
LAMA3-206ENST00000586751 MORC1Q86VD1 984 aa11.61□□□□□ -0.55
LAMA3-206ENST00000586751 FRAT1Q92837 279 aaPredicted RBP11.61□□□□□ -0.55
LAMA3-206ENST00000586751 FRAT2O75474 233 aaPredicted RBP11.61□□□□□ -0.55
LAMA3-206ENST00000586751 CLUAP1Q96AJ1 413 aa11.61□□□□□ -0.55
LAMA3-206ENST00000586751 NEXMIFQ5QGS0 1516 aa11.6□□□□□ -0.55
LAMA3-206ENST00000586751 MYO5BQ9ULV0 1848 aa11.6□□□□□ -0.55
LAMA3-206ENST00000586751 PIK3C2BO00750 1634 aa11.6□□□□□ -0.55
LAMA3-206ENST00000586751 POGZQ7Z3K3 1410 aa11.6□□□□□ -0.55
LAMA3-206ENST00000586751 CD109Q6YHK3 1445 aa11.6□□□□□ -0.55
LAMA3-206ENST00000586751 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.59□□□□□ -0.55
LAMA3-206ENST00000586751 CABP2Q9NPB3 220 aa11.59□□□□□ -0.55
LAMA3-206ENST00000586751 SAFB2Q14151 953 aaKnown RBP eCLIP11.59□□□□□ -0.55
LAMA3-206ENST00000586751 BRPF3Q9ULD4 1205 aa11.59□□□□□ -0.55
LAMA3-206ENST00000586751 USP35Q9P2H5 1018 aa11.59□□□□□ -0.55
LAMA3-206ENST00000586751 ADGRB2O60241 1585 aa11.58□□□□□ -0.56
LAMA3-206ENST00000586751 RAPGEF3O95398 923 aa11.58□□□□□ -0.56
LAMA3-206ENST00000586751 PDE3AQ14432 1141 aa11.58□□□□□ -0.56
LAMA3-206ENST00000586751 RUNDC1Q96C34 613 aa11.58□□□□□ -0.56
LAMA3-206ENST00000586751 DDRGK1Q96HY6 314 aa11.58□□□□□ -0.56
LAMA3-206ENST00000586751 CHMP4AQ9BY43 222 aa11.58□□□□□ -0.56
LAMA3-206ENST00000586751 TSR2Q969E8 191 aaKnown RBP11.58□□□□□ -0.56
LAMA3-206ENST00000586751 PPM1GO15355 546 aaPredicted RBP11.57□□□□□ -0.56
LAMA3-206ENST00000586751 COL3A1P02461 1466 aaPredicted RBP11.57□□□□□ -0.56
LAMA3-206ENST00000586751 CD163L1Q9NR16 1453 aa11.57□□□□□ -0.56
LAMA3-206ENST00000586751 MLH3Q9UHC1 1453 aa11.56□□□□□ -0.56
LAMA3-206ENST00000586751 PLEKHF1Q96S99 279 aa11.56□□□□□ -0.56
LAMA3-206ENST00000586751 CGNL1Q0VF96 1302 aa11.56□□□□□ -0.56
LAMA3-206ENST00000586751 A0A1W2PP64 1363 aa11.55□□□□□ -0.56
LAMA3-206ENST00000586751 FBLN1P23142 703 aa11.55□□□□□ -0.56
LAMA3-206ENST00000586751 HOMEZQ8IX15 550 aa11.55□□□□□ -0.56
LAMA3-206ENST00000586751 TRIM35Q9UPQ4 493 aa11.55□□□□□ -0.56
LAMA3-206ENST00000586751 GSE1Q14687 1217 aa11.54□□□□□ -0.56
LAMA3-206ENST00000586751 PDZRN3Q9UPQ7 1066 aa11.54□□□□□ -0.56
LAMA3-206ENST00000586751 ANKRD36BQ8N2N9 1353 aa11.54□□□□□ -0.56
LAMA3-206ENST00000586751 IDI1Q13907 227 aa11.54□□□□□ -0.56
LAMA3-206ENST00000586751 GGNBP2Q9H3C7 697 aa11.54□□□□□ -0.56
LAMA3-206ENST00000586751 DIP2CQ9Y2E4 1556 aa11.53□□□□□ -0.56
LAMA3-206ENST00000586751 PTPRMP28827 1452 aa11.53□□□□□ -0.56
LAMA3-206ENST00000586751 WDR63Q8IWG1 891 aa11.52□□□□□ -0.56
LAMA3-206ENST00000586751 STK26Q9P289 416 aa11.52□□□□□ -0.57
LAMA3-206ENST00000586751 U2AF1L5P0DN76 240 aaPredicted RBP11.52□□□□□ -0.57
LAMA3-206ENST00000586751 CANXP27824 592 aaKnown RBP11.52□□□□□ -0.57
LAMA3-206ENST00000586751 U2AF1Q01081 240 aaKnown RBP eCLIP11.52□□□□□ -0.57
LAMA3-206ENST00000586751 CCDC27Q2M243 656 aa11.52□□□□□ -0.57
LAMA3-206ENST00000586751 ANTXR1Q9H6X2 564 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms