RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 PTPRUQ92729 1446 aa11.75□□□□□ -0.53
NPC1-204ENST00000586718 ITSN1Q15811 1721 aa11.74□□□□□ -0.53
NPC1-204ENST00000586718 SAFB2Q14151 953 aaKnown RBP eCLIP11.74□□□□□ -0.53
NPC1-204ENST00000586718 MINK1Q8N4C8 1332 aaPredicted RBP11.74□□□□□ -0.53
NPC1-204ENST00000586718 ATAD2Q6PL18 1390 aa11.74□□□□□ -0.53
NPC1-204ENST00000586718 NKTRP30414 1462 aaKnown RBP11.74□□□□□ -0.53
NPC1-204ENST00000586718 PUS7Q96PZ0 661 aaKnown RBP11.73□□□□□ -0.53
NPC1-204ENST00000586718 NCKAP5LQ9HCH0 1330 aa11.73□□□□□ -0.53
NPC1-204ENST00000586718 ROBO2Q9HCK4 1378 aa11.73□□□□□ -0.53
NPC1-204ENST00000586718 NALCNQ8IZF0 1738 aa11.72□□□□□ -0.53
NPC1-204ENST00000586718 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.72□□□□□ -0.53
NPC1-204ENST00000586718 PLEKHH1Q9ULM0 1364 aa11.72□□□□□ -0.53
NPC1-204ENST00000586718 SRPK2P78362 688 aaKnown RBP11.72□□□□□ -0.53
NPC1-204ENST00000586718 AMOTL2Q9Y2J4 779 aa11.72□□□□□ -0.53
NPC1-204ENST00000586718 STRCQ7RTU9 1775 aa11.72□□□□□ -0.53
NPC1-204ENST00000586718 USP32Q8NFA0 1604 aa11.71□□□□□ -0.53
NPC1-204ENST00000586718 CDC42BPGQ6DT37 1551 aa11.71□□□□□ -0.53
NPC1-204ENST00000586718 TOPAZ1Q8N9V7 1692 aa11.71□□□□□ -0.54
NPC1-204ENST00000586718 WAPLQ7Z5K2 1190 aa11.7□□□□□ -0.54
NPC1-204ENST00000586718 FMN2Q9NZ56 1722 aa11.69□□□□□ -0.54
NPC1-204ENST00000586718 KTN1Q86UP2 1357 aaKnown RBP11.69□□□□□ -0.54
NPC1-204ENST00000586718 HSPA2P54652 639 aa11.69□□□□□ -0.54
NPC1-204ENST00000586718 ATP7BP35670 1465 aa11.69□□□□□ -0.54
NPC1-204ENST00000586718 MIER1Q8N108 512 aa11.68□□□□□ -0.54
NPC1-204ENST00000586718 TMC1Q8TDI8 760 aa11.68□□□□□ -0.54
NPC1-204ENST00000586718 ADGRL3Q9HAR2 1447 aa11.68□□□□□ -0.54
NPC1-204ENST00000586718 WASLO00401 505 aaPredicted RBP11.67□□□□□ -0.54
NPC1-204ENST00000586718 KCNA6P17658 529 aa11.67□□□□□ -0.54
NPC1-204ENST00000586718 CABP2Q9NPB3 220 aa11.67□□□□□ -0.54
NPC1-204ENST00000586718 KIF20BQ96Q89 1820 aa11.67□□□□□ -0.54
NPC1-204ENST00000586718 ANKRD36BQ8N2N9 1353 aa11.67□□□□□ -0.54
NPC1-204ENST00000586718 CDK19Q9BWU1 502 aa11.66□□□□□ -0.54
NPC1-204ENST00000586718 PANK3Q9H999 370 aa11.66□□□□□ -0.54
NPC1-204ENST00000586718 KNSTRNQ9Y448 316 aa11.66□□□□□ -0.54
NPC1-204ENST00000586718 AKAP12Q02952 1782 aa11.66□□□□□ -0.54
NPC1-204ENST00000586718 MON2Q7Z3U7 1717 aa11.66□□□□□ -0.54
NPC1-204ENST00000586718 PPIP5K1Q6PFW1 1433 aa11.65□□□□□ -0.54
NPC1-204ENST00000586718 ANKARQ7Z5J8 1434 aa11.65□□□□□ -0.54
NPC1-204ENST00000586718 NSD3Q9BZ95 1437 aa11.65□□□□□ -0.54
NPC1-204ENST00000586718 ANKRD26Q9UPS8 1709 aa11.65□□□□□ -0.54
NPC1-204ENST00000586718 TERF2IPQ9NYB0 399 aa11.64□□□□□ -0.55
NPC1-204ENST00000586718 STRCP1A6NGW2 1772 aa11.64□□□□□ -0.55
NPC1-204ENST00000586718 CCER2I3L3R5 266 aa11.63□□□□□ -0.55
NPC1-204ENST00000586718 HDGFL2Q7Z4V5 671 aaPredicted RBP11.63□□□□□ -0.55
NPC1-204ENST00000586718 C14orf37Q86TY3 774 aa11.63□□□□□ -0.55
NPC1-204ENST00000586718 PRKRIP1Q9H875 184 aaPredicted RBP11.63□□□□□ -0.55
NPC1-204ENST00000586718 A0A1W2PP64 1363 aa11.63□□□□□ -0.55
NPC1-204ENST00000586718 NSD2O96028 1365 aa11.63□□□□□ -0.55
NPC1-204ENST00000586718 NPC1L1Q9UHC9 1359 aa11.63□□□□□ -0.55
NPC1-204ENST00000586718 RALBP1Q15311 655 aa11.62□□□□□ -0.55
NPC1-204ENST00000586718 DMRT2Q9Y5R5 561 aa11.62□□□□□ -0.55
NPC1-204ENST00000586718 KIF1AQ12756 1690 aa11.62□□□□□ -0.55
NPC1-204ENST00000586718 NCOA3Q9Y6Q9 1424 aa11.61□□□□□ -0.55
NPC1-204ENST00000586718 PARD3Q8TEW0 1356 aa11.61□□□□□ -0.55
NPC1-204ENST00000586718 NRKQ7Z2Y5 1582 aa11.61□□□□□ -0.55
NPC1-204ENST00000586718 DCCP43146 1447 aa11.6□□□□□ -0.55
NPC1-204ENST00000586718 RGPD8O14715 1765 aaPredicted RBP11.6□□□□□ -0.55
NPC1-204ENST00000586718 CD163L1Q9NR16 1453 aa11.6□□□□□ -0.55
NPC1-204ENST00000586718 PROSER2Q86WR7 435 aaPredicted RBP11.6□□□□□ -0.55
NPC1-204ENST00000586718 NUDT16Q96DE0 195 aaKnown RBP11.6□□□□□ -0.55
NPC1-204ENST00000586718 SLC12A5Q9H2X9 1139 aa11.6□□□□□ -0.55
NPC1-204ENST00000586718 CCDC61Q9Y6R9 512 aa11.6□□□□□ -0.55
NPC1-204ENST00000586718 EDC4Q6P2E9 1401 aaKnown RBP11.6□□□□□ -0.55
NPC1-204ENST00000586718 CGNL1Q0VF96 1302 aa11.6□□□□□ -0.55
NPC1-204ENST00000586718 MYBBP1AQ9BQG0 1328 aaKnown RBP11.6□□□□□ -0.55
NPC1-204ENST00000586718 CNGB1Q14028 1251 aaPredicted RBP11.59□□□□□ -0.55
NPC1-204ENST00000586718 PER1O15534 1290 aaPredicted RBP11.58□□□□□ -0.56
NPC1-204ENST00000586718 CC2D1BQ5T0F9 858 aaKnown RBP11.58□□□□□ -0.56
NPC1-204ENST00000586718 CABP1Q9NZU7 370 aa11.58□□□□□ -0.56
NPC1-204ENST00000586718 XIRP1Q702N8 1843 aaKnown RBP11.58□□□□□ -0.56
NPC1-204ENST00000586718 PRR36Q9H6K5 1346 aa11.58□□□□□ -0.56
NPC1-204ENST00000586718 MSH6P52701 1360 aa11.57□□□□□ -0.56
NPC1-204ENST00000586718 TMEM94Q12767 1356 aa11.57□□□□□ -0.56
NPC1-204ENST00000586718 CPSF1Q10570 1443 aaKnown RBP11.57□□□□□ -0.56
NPC1-204ENST00000586718 AMER1Q5JTC6 1135 aaPredicted RBP11.56□□□□□ -0.56
NPC1-204ENST00000586718 LRRC7Q96NW7 1537 aa11.55□□□□□ -0.56
NPC1-204ENST00000586718 BRD4O60885 1362 aaPredicted RBP11.55□□□□□ -0.56
NPC1-204ENST00000586718 NUTM2FA1L443 756 aa11.55□□□□□ -0.56
NPC1-204ENST00000586718 NLRP13Q86W25 1043 aa11.55□□□□□ -0.56
NPC1-204ENST00000586718 MRS2Q9HD23 443 aa11.55□□□□□ -0.56
NPC1-204ENST00000586718 USP6P35125 1406 aa11.54□□□□□ -0.56
NPC1-204ENST00000586718 PLEKHG3A1L390 1219 aa11.54□□□□□ -0.56
NPC1-204ENST00000586718 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
NPC1-204ENST00000586718 CARD14Q9BXL6 1004 aa11.54□□□□□ -0.56
NPC1-204ENST00000586718 POLR3AO14802 1390 aaPredicted RBP11.54□□□□□ -0.56
NPC1-204ENST00000586718 ATF3P18847 181 aa11.53□□□□□ -0.56
NPC1-204ENST00000586718 C19orf44Q9H6X5 657 aa11.53□□□□□ -0.56
NPC1-204ENST00000586718 ZNF335Q9H4Z2 1342 aaPredicted RBP11.53□□□□□ -0.56
NPC1-204ENST00000586718 MORC1Q86VD1 984 aa11.52□□□□□ -0.57
NPC1-204ENST00000586718 NGDNQ8NEJ9 315 aaKnown RBP11.52□□□□□ -0.57
NPC1-204ENST00000586718 ACEP12821 1306 aa11.52□□□□□ -0.57
NPC1-204ENST00000586718 USP54Q70EL1 1684 aa11.52□□□□□ -0.57
NPC1-204ENST00000586718 AEBP2Q6ZN18 517 aaPredicted RBP11.51□□□□□ -0.57
NPC1-204ENST00000586718 CADPS2Q86UW7 1296 aa11.51□□□□□ -0.57
NPC1-204ENST00000586718 RBM33Q96EV2 1170 aaKnown RBP11.51□□□□□ -0.57
NPC1-204ENST00000586718 MST1RQ04912 1400 aa11.51□□□□□ -0.57
NPC1-204ENST00000586718 C1orf167Q5SNV9 1468 aa11.51□□□□□ -0.57
NPC1-204ENST00000586718 PIK3C2AO00443 1686 aa11.5□□□□□ -0.57
NPC1-204ENST00000586718 PHF8Q9UPP1 1060 aa11.5□□□□□ -0.57
NPC1-204ENST00000586718 TTC21AQ8NDW8 1320 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms