RNA–Protein interactions for RNA: ENST00000586410.2

TCF3-209, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-209ENST00000586410 PCGF6Q9BYE7 350 aa19.53■□□□□ 0.72
TCF3-209ENST00000586410 COL16A1Q07092 1604 aaPredicted RBP19.53■□□□□ 0.72
TCF3-209ENST00000586410 PHLPP1O60346 1717 aa19.53■□□□□ 0.72
TCF3-209ENST00000586410 C1orf167Q5SNV9 1468 aa19.52■□□□□ 0.72
TCF3-209ENST00000586410 NHSL1Q5SYE7 1610 aa19.51■□□□□ 0.71
TCF3-209ENST00000586410 FMN2Q9NZ56 1722 aa19.51■□□□□ 0.71
TCF3-209ENST00000586410 BRINP3Q76B58 766 aa19.51■□□□□ 0.71
TCF3-209ENST00000586410 TRPM1Q7Z4N2 1603 aa19.51■□□□□ 0.71
TCF3-209ENST00000586410 ADGRB2O60241 1585 aa19.49■□□□□ 0.71
TCF3-209ENST00000586410 PRAM1Q96QH2 718 aa19.48■□□□□ 0.71
TCF3-209ENST00000586410 TRAK1Q9UPV9 953 aa19.47■□□□□ 0.71
TCF3-209ENST00000586410 NBPF1Q3BBV0 1214 aa19.46■□□□□ 0.71
TCF3-209ENST00000586410 MED1Q15648 1581 aaPredicted RBP19.45■□□□□ 0.7
TCF3-209ENST00000586410 RGPD8O14715 1765 aaPredicted RBP19.43■□□□□ 0.7
TCF3-209ENST00000586410 SAFB2Q14151 953 aaKnown RBP eCLIP19.43■□□□□ 0.7
TCF3-209ENST00000586410 USP32Q8NFA0 1604 aa19.43■□□□□ 0.7
TCF3-209ENST00000586410 ORAI2Q96SN7 254 aa19.42■□□□□ 0.7
TCF3-209ENST00000586410 TONSLQ96HA7 1378 aa19.42■□□□□ 0.7
TCF3-209ENST00000586410 NBPF8Q3BBV2 869 aa19.41■□□□□ 0.7
TCF3-209ENST00000586410 SHPRHQ149N8 1683 aa19.4■□□□□ 0.7
TCF3-209ENST00000586410 DDX17Q92841 729 aaKnown RBP19.4■□□□□ 0.7
TCF3-209ENST00000586410 POGKQ9P215 609 aa19.4■□□□□ 0.7
TCF3-209ENST00000586410 KIF1AQ12756 1690 aa19.38■□□□□ 0.69
TCF3-209ENST00000586410 GPRASP1Q5JY77 1395 aa19.37■□□□□ 0.69
TCF3-209ENST00000586410 JCADQ9P266 1359 aa19.37■□□□□ 0.69
TCF3-209ENST00000586410 MINK1Q8N4C8 1332 aaPredicted RBP19.37■□□□□ 0.69
TCF3-209ENST00000586410 NUTM2FA1L443 756 aa19.37■□□□□ 0.69
TCF3-209ENST00000586410 QRICH2Q9H0J4 1663 aa19.36■□□□□ 0.69
TCF3-209ENST00000586410 RALGAPBQ86X10 1494 aa19.36■□□□□ 0.69
TCF3-209ENST00000586410 ANKARQ7Z5J8 1434 aa19.36■□□□□ 0.69
TCF3-209ENST00000586410 HIRIP3Q9BW71 556 aaPredicted RBP19.36■□□□□ 0.69
TCF3-209ENST00000586410 TULP4Q9NRJ4 1543 aa19.35■□□□□ 0.69
TCF3-209ENST00000586410 PXDNQ92626 1479 aa19.35■□□□□ 0.69
TCF3-209ENST00000586410 CLSPNQ9HAW4 1339 aa19.35■□□□□ 0.69
TCF3-209ENST00000586410 ROCK2O75116 1388 aaKnown RBP19.34■□□□□ 0.69
TCF3-209ENST00000586410 SOS2Q07890 1332 aaPredicted RBP19.34■□□□□ 0.69
TCF3-209ENST00000586410 ESCO1Q5FWF5 840 aa19.34■□□□□ 0.69
TCF3-209ENST00000586410 DISP3Q9P2K9 1392 aa19.33■□□□□ 0.69
TCF3-209ENST00000586410 PRR36Q9H6K5 1346 aa19.33■□□□□ 0.69
TCF3-209ENST00000586410 LRP6O75581 1613 aa19.33■□□□□ 0.68
TCF3-209ENST00000586410 ATP7BP35670 1465 aa19.32■□□□□ 0.68
TCF3-209ENST00000586410 TOPAZ1Q8N9V7 1692 aa19.31■□□□□ 0.68
TCF3-209ENST00000586410 WASLO00401 505 aaPredicted RBP19.31■□□□□ 0.68
TCF3-209ENST00000586410 PNPLA6Q8IY17 1366 aa19.31■□□□□ 0.68
TCF3-209ENST00000586410 CENPJQ9HC77 1338 aaPredicted RBP19.3■□□□□ 0.68
TCF3-209ENST00000586410 EIF3AQ14152 1382 aaKnown RBP19.3■□□□□ 0.68
TCF3-209ENST00000586410 NPHP3Q7Z494 1330 aa19.29■□□□□ 0.68
TCF3-209ENST00000586410 ITSN1Q15811 1721 aa19.29■□□□□ 0.68
TCF3-209ENST00000586410 FOXO3O43524 673 aa19.29■□□□□ 0.68
TCF3-209ENST00000586410 COL22A1Q8NFW1 1626 aaPredicted RBP19.29■□□□□ 0.68
TCF3-209ENST00000586410 SPATA31A6Q5VVP1 1343 aa19.27■□□□□ 0.68
TCF3-209ENST00000586410 LRRC59Q96AG4 307 aaKnown RBP19.27■□□□□ 0.68
TCF3-209ENST00000586410 XPCQ01831 940 aaPredicted RBP19.26■□□□□ 0.67
TCF3-209ENST00000586410 PHF8Q9UPP1 1060 aa19.26■□□□□ 0.67
TCF3-209ENST00000586410 TRPM3Q9HCF6 1732 aaPredicted RBP19.25■□□□□ 0.67
TCF3-209ENST00000586410 CDK19Q9BWU1 502 aa19.24■□□□□ 0.67
TCF3-209ENST00000586410 PMFBP1Q8TBY8 1022 aa19.22■□□□□ 0.67
TCF3-209ENST00000586410 CCER1Q8TC90 406 aaPredicted RBP19.22■□□□□ 0.67
TCF3-209ENST00000586410 CARD11Q9BXL7 1154 aa19.22■□□□□ 0.67
TCF3-209ENST00000586410 TIMELESSQ9UNS1 1208 aa19.22■□□□□ 0.67
TCF3-209ENST00000586410 SBNO2Q9Y2G9 1366 aa19.21■□□□□ 0.67
TCF3-209ENST00000586410 NUDT16Q96DE0 195 aaKnown RBP19.21■□□□□ 0.67
TCF3-209ENST00000586410 RGS17Q9UGC6 210 aaPredicted RBP19.21■□□□□ 0.67
TCF3-209ENST00000586410 ALS2Q96Q42 1657 aa19.2■□□□□ 0.66
TCF3-209ENST00000586410 SPATA31A3Q5VYP0 1347 aa19.2■□□□□ 0.66
TCF3-209ENST00000586410 TNS3Q68CZ2 1445 aa19.19■□□□□ 0.66
TCF3-209ENST00000586410 ILDR2Q71H61 639 aa19.19■□□□□ 0.66
TCF3-209ENST00000586410 KRT28Q7Z3Y7 464 aa19.19■□□□□ 0.66
TCF3-209ENST00000586410 SBNO1A3KN83 1393 aa19.18■□□□□ 0.66
TCF3-209ENST00000586410 ABCA3Q99758 1704 aa19.17■□□□□ 0.66
TCF3-209ENST00000586410 PHF23Q9BUL5 403 aaPredicted RBP19.17■□□□□ 0.66
TCF3-209ENST00000586410 CABP2Q9NPB3 220 aa19.17■□□□□ 0.66
TCF3-209ENST00000586410 POLR3AO14802 1390 aaPredicted RBP19.17■□□□□ 0.66
TCF3-209ENST00000586410 NUTM2BA6NNL0 878 aaPredicted RBP19.16■□□□□ 0.66
TCF3-209ENST00000586410 NUTM2EB1AL46 878 aaPredicted RBP19.16■□□□□ 0.66
TCF3-209ENST00000586410 NUTM2AQ8IVF1 878 aaPredicted RBP19.16■□□□□ 0.66
TCF3-209ENST00000586410 CCDC61Q9Y6R9 512 aa19.16■□□□□ 0.66
TCF3-209ENST00000586410 MARF1Q9Y4F3 1742 aaKnown RBP19.15■□□□□ 0.66
TCF3-209ENST00000586410 SRPK2P78362 688 aaKnown RBP19.15■□□□□ 0.66
TCF3-209ENST00000586410 PPIP5K1Q6PFW1 1433 aa19.15■□□□□ 0.66
TCF3-209ENST00000586410 CRYBG1Q9Y4K1 1723 aa19.14■□□□□ 0.66
TCF3-209ENST00000586410 PLEKHG3A1L390 1219 aa19.14■□□□□ 0.65
TCF3-209ENST00000586410 EVC2Q86UK5 1308 aa19.14■□□□□ 0.65
TCF3-209ENST00000586410 PSME1Q06323 249 aa19.13■□□□□ 0.65
TCF3-209ENST00000586410 ACEP12821 1306 aa19.11■□□□□ 0.65
TCF3-209ENST00000586410 NGDNQ8NEJ9 315 aaKnown RBP19.11■□□□□ 0.65
TCF3-209ENST00000586410 TESK2Q96S53 571 aa19.11■□□□□ 0.65
TCF3-209ENST00000586410 ARHGEF10O15013 1369 aa19.1■□□□□ 0.65
TCF3-209ENST00000586410 USP47Q96K76 1375 aa19.1■□□□□ 0.65
TCF3-209ENST00000586410 MEX3CQ5U5Q3 659 aaKnown RBP19.1■□□□□ 0.65
TCF3-209ENST00000586410 AKAP12Q02952 1782 aa19.09■□□□□ 0.65
TCF3-209ENST00000586410 POTEAQ6S8J7 498 aa19.09■□□□□ 0.65
TCF3-209ENST00000586410 ST20-MTHFSA0A0A6YYL1 179 aa19.08■□□□□ 0.64
TCF3-209ENST00000586410 ADAMTS2O95450 1211 aa19.08■□□□□ 0.64
TCF3-209ENST00000586410 ATAD2Q6PL18 1390 aa19.07■□□□□ 0.64
TCF3-209ENST00000586410 CABP1Q9NZU7 370 aa19.07■□□□□ 0.64
TCF3-209ENST00000586410 NRKQ7Z2Y5 1582 aa19.06■□□□□ 0.64
TCF3-209ENST00000586410 AFF2P51816 1311 aa19.06■□□□□ 0.64
TCF3-209ENST00000586410 PHRF1Q9P1Y6 1649 aaKnown RBP19.06■□□□□ 0.64
TCF3-209ENST00000586410 USP6P35125 1406 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms