RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 PPLO60437 1756 aa17.99■□□□□ 0.47
BRCA1-225ENST00000586385 PXDNQ92626 1479 aa17.98■□□□□ 0.47
BRCA1-225ENST00000586385 ATRNO75882 1429 aa17.98■□□□□ 0.47
BRCA1-225ENST00000586385 CDC42BPGQ6DT37 1551 aa17.97■□□□□ 0.47
BRCA1-225ENST00000586385 USP21Q9UK80 565 aa17.97■□□□□ 0.47
BRCA1-225ENST00000586385 COL22A1Q8NFW1 1626 aaPredicted RBP17.97■□□□□ 0.47
BRCA1-225ENST00000586385 SPATA31E1Q6ZUB1 1445 aa17.96■□□□□ 0.47
BRCA1-225ENST00000586385 TECPR2O15040 1411 aa17.95■□□□□ 0.46
BRCA1-225ENST00000586385 BCL9LQ86UU0 1499 aa17.95■□□□□ 0.46
BRCA1-225ENST00000586385 PLEKHH1Q9ULM0 1364 aa17.94■□□□□ 0.46
BRCA1-225ENST00000586385 XPCQ01831 940 aaPredicted RBP17.94■□□□□ 0.46
BRCA1-225ENST00000586385 ESCO1Q5FWF5 840 aa17.94■□□□□ 0.46
BRCA1-225ENST00000586385 WAPLQ7Z5K2 1190 aa17.94■□□□□ 0.46
BRCA1-225ENST00000586385 TRPC5Q9UL62 973 aaPredicted RBP17.94■□□□□ 0.46
BRCA1-225ENST00000586385 NPHP3Q7Z494 1330 aa17.93■□□□□ 0.46
BRCA1-225ENST00000586385 LRPPRCP42704 1394 aaKnown RBP17.92■□□□□ 0.46
BRCA1-225ENST00000586385 FOXO3O43524 673 aa17.92■□□□□ 0.46
BRCA1-225ENST00000586385 ATAD2Q6PL18 1390 aa17.91■□□□□ 0.46
BRCA1-225ENST00000586385 STK26Q9P289 416 aa17.91■□□□□ 0.46
BRCA1-225ENST00000586385 ABCC11Q96J66 1382 aa17.91■□□□□ 0.46
BRCA1-225ENST00000586385 NUTM2FA1L443 756 aa17.9■□□□□ 0.46
BRCA1-225ENST00000586385 RGL3Q3MIN7 710 aa17.9■□□□□ 0.46
BRCA1-225ENST00000586385 TMEM132EQ6IEE7 984 aa17.9■□□□□ 0.46
BRCA1-225ENST00000586385 CCDC144AA2RUR9 1427 aa17.89■□□□□ 0.45
BRCA1-225ENST00000586385 PIK3C2GO75747 1445 aa17.89■□□□□ 0.45
BRCA1-225ENST00000586385 ANKRD30BQ9BXX2 1392 aa17.88■□□□□ 0.45
BRCA1-225ENST00000586385 MPHOSPH9Q99550 1183 aa17.86■□□□□ 0.45
BRCA1-225ENST00000586385 IFT172Q9UG01 1749 aa17.86■□□□□ 0.45
BRCA1-225ENST00000586385 SPATA31A3Q5VYP0 1347 aa17.85■□□□□ 0.45
BRCA1-225ENST00000586385 GJD4Q96KN9 370 aaPredicted RBP17.85■□□□□ 0.45
BRCA1-225ENST00000586385 SRCAPQ6ZRS2 3230 aa17.85■□□□□ 0.45
BRCA1-225ENST00000586385 SLIT2O94813 1529 aa17.84■□□□□ 0.45
BRCA1-225ENST00000586385 YTHDC2Q9H6S0 1430 aaKnown RBP17.84■□□□□ 0.45
BRCA1-225ENST00000586385 KNDC1Q76NI1 1749 aa17.84■□□□□ 0.45
BRCA1-225ENST00000586385 FMN2Q9NZ56 1722 aa17.82■□□□□ 0.44
BRCA1-225ENST00000586385 GLI3P10071 1580 aa17.82■□□□□ 0.44
BRCA1-225ENST00000586385 RALGAPBQ86X10 1494 aa17.82■□□□□ 0.44
BRCA1-225ENST00000586385 EP400Q96L91 3159 aa17.81■□□□□ 0.44
BRCA1-225ENST00000586385 MARF1Q9Y4F3 1742 aaKnown RBP17.81■□□□□ 0.44
BRCA1-225ENST00000586385 C14orf93Q9H972 538 aaKnown RBP17.81■□□□□ 0.44
BRCA1-225ENST00000586385 NRXN1Q9ULB1 1477 aa17.81■□□□□ 0.44
BRCA1-225ENST00000586385 KRT28Q7Z3Y7 464 aa17.8■□□□□ 0.44
BRCA1-225ENST00000586385 UNC5CLQ8IV45 518 aa17.8■□□□□ 0.44
BRCA1-225ENST00000586385 SIRT1Q96EB6 747 aa17.8■□□□□ 0.44
BRCA1-225ENST00000586385 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.78■□□□□ 0.44
BRCA1-225ENST00000586385 CFAP70Q5T0N1 1121 aa17.78■□□□□ 0.44
BRCA1-225ENST00000586385 USP32Q8NFA0 1604 aa17.77■□□□□ 0.44
BRCA1-225ENST00000586385 CABLES1Q8TDN4 633 aa17.77■□□□□ 0.44
BRCA1-225ENST00000586385 TNS3Q68CZ2 1445 aa17.77■□□□□ 0.44
BRCA1-225ENST00000586385 KIF1AQ12756 1690 aa17.77■□□□□ 0.43
BRCA1-225ENST00000586385 CCDC125Q86Z20 511 aa17.76■□□□□ 0.43
BRCA1-225ENST00000586385 PHF8Q9UPP1 1060 aa17.76■□□□□ 0.43
BRCA1-225ENST00000586385 ZRANB1Q9UGI0 708 aa17.75■□□□□ 0.43
BRCA1-225ENST00000586385 SAFB2Q14151 953 aaKnown RBP eCLIP17.73■□□□□ 0.431e-6■□□□□ 10.7
BRCA1-225ENST00000586385 PRAM1Q96QH2 718 aa17.73■□□□□ 0.43
BRCA1-225ENST00000586385 SBNO1A3KN83 1393 aa17.73■□□□□ 0.43
BRCA1-225ENST00000586385 DHX57Q6P158 1386 aaKnown RBP17.72■□□□□ 0.43
BRCA1-225ENST00000586385 VPS72Q15906 364 aa17.72■□□□□ 0.43
BRCA1-225ENST00000586385 BLMP54132 1417 aaPredicted RBP17.72■□□□□ 0.43
BRCA1-225ENST00000586385 RGPD8O14715 1765 aaPredicted RBP17.71■□□□□ 0.43
BRCA1-225ENST00000586385 ONECUT3O60422 494 aaPredicted RBP17.71■□□□□ 0.43
BRCA1-225ENST00000586385 DEFB132Q7Z7B7 95 aa17.71■□□□□ 0.43
BRCA1-225ENST00000586385 SEPT12Q8IYM1 358 aa17.71■□□□□ 0.43
BRCA1-225ENST00000586385 PLEKHG5O94827 1062 aa17.7■□□□□ 0.42
BRCA1-225ENST00000586385 ADGRB1O14514 1584 aa17.7■□□□□ 0.42
BRCA1-225ENST00000586385 DLC1Q96QB1 1528 aa17.69■□□□□ 0.42
BRCA1-225ENST00000586385 FAM83GA6ND36 823 aa17.69■□□□□ 0.42
BRCA1-225ENST00000586385 PSME1Q06323 249 aa17.69■□□□□ 0.42
BRCA1-225ENST00000586385 BRWD3Q6RI45 1802 aa17.68■□□□□ 0.42
BRCA1-225ENST00000586385 ANKARQ7Z5J8 1434 aa17.68■□□□□ 0.42
BRCA1-225ENST00000586385 PMFBP1Q8TBY8 1022 aa17.68■□□□□ 0.42
BRCA1-225ENST00000586385 ABCA3Q99758 1704 aa17.68■□□□□ 0.42
BRCA1-225ENST00000586385 PRR36Q9H6K5 1346 aa17.68■□□□□ 0.42
BRCA1-225ENST00000586385 ARHGEF10O15013 1369 aa17.67■□□□□ 0.42
BRCA1-225ENST00000586385 PLCH1Q4KWH8 1693 aa17.67■□□□□ 0.42
BRCA1-225ENST00000586385 ADGRB2O60241 1585 aa17.66■□□□□ 0.42
BRCA1-225ENST00000586385 HAP1P54257 671 aaPredicted RBP17.65■□□□□ 0.42
BRCA1-225ENST00000586385 LMOD2Q6P5Q4 547 aa17.65■□□□□ 0.42
BRCA1-225ENST00000586385 HIRIP3Q9BW71 556 aaPredicted RBP17.65■□□□□ 0.42
BRCA1-225ENST00000586385 NWD2Q9ULI1 1742 aa17.64■□□□□ 0.41
BRCA1-225ENST00000586385 POGKQ9P215 609 aa17.64■□□□□ 0.41
BRCA1-225ENST00000586385 TRPM3Q9HCF6 1732 aaPredicted RBP17.64■□□□□ 0.41
BRCA1-225ENST00000586385 KRT27Q7Z3Y8 459 aa17.63■□□□□ 0.41
BRCA1-225ENST00000586385 TRAK1Q9UPV9 953 aa17.63■□□□□ 0.41
BRCA1-225ENST00000586385 RAB3GAP2Q9H2M9 1393 aa17.63■□□□□ 0.41
BRCA1-225ENST00000586385 CCDC9Q9Y3X0 531 aaKnown RBP17.62■□□□□ 0.41
BRCA1-225ENST00000586385 ACIN1Q9UKV3 1341 aaKnown RBP17.62■□□□□ 0.41
BRCA1-225ENST00000586385 NRAPQ86VF7 1730 aa17.61■□□□□ 0.41
BRCA1-225ENST00000586385 MINK1Q8N4C8 1332 aaPredicted RBP17.61■□□□□ 0.41
BRCA1-225ENST00000586385 ALS2Q96Q42 1657 aa17.61■□□□□ 0.41
BRCA1-225ENST00000586385 BTG4Q9NY30 223 aa17.6■□□□□ 0.41
BRCA1-225ENST00000586385 TULP4Q9NRJ4 1543 aa17.59■□□□□ 0.41
BRCA1-225ENST00000586385 FAM98CQ17RN3 349 aaKnown RBP17.59■□□□□ 0.41
BRCA1-225ENST00000586385 WASLO00401 505 aaPredicted RBP17.58■□□□□ 0.4
BRCA1-225ENST00000586385 KDM2AQ9Y2K7 1162 aa17.57■□□□□ 0.4
BRCA1-225ENST00000586385 GPRASP1Q5JY77 1395 aa17.56■□□□□ 0.4
BRCA1-225ENST00000586385 SPATA31A5Q5VU36 1347 aa17.56■□□□□ 0.4
BRCA1-225ENST00000586385 SPATA31A7Q8IWB4 1347 aa17.56■□□□□ 0.4
BRCA1-225ENST00000586385 SF3B2Q13435 895 aaKnown RBP17.56■□□□□ 0.4
BRCA1-225ENST00000586385 FAM182BQ5T319 152 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms