RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 JCADQ9P266 1359 aa15.08■□□□□ 0
SMARCA4-209ENST00000586122 C1orf167Q5SNV9 1468 aa15.08■□□□□ 0
SMARCA4-209ENST00000586122 FMN2Q9NZ56 1722 aa15.04■□□□□ -0
SMARCA4-209ENST00000586122 SHPRHQ149N8 1683 aa15.04■□□□□ -0
SMARCA4-209ENST00000586122 WAPLQ7Z5K2 1190 aa15.04■□□□□ -0
SMARCA4-209ENST00000586122 ADGRB2O60241 1585 aa15.03■□□□□ -0
SMARCA4-209ENST00000586122 PLEKHH1Q9ULM0 1364 aa15.03■□□□□ -0
SMARCA4-209ENST00000586122 SPATA31A6Q5VVP1 1343 aa15.02■□□□□ -0
SMARCA4-209ENST00000586122 POGKQ9P215 609 aa15.02■□□□□ -0
SMARCA4-209ENST00000586122 KIF1AQ12756 1690 aa15.01□□□□□ -0.01
SMARCA4-209ENST00000586122 PRAM1Q96QH2 718 aa15.01□□□□□ -0.01
SMARCA4-209ENST00000586122 ARHGEF28Q8N1W1 1705 aaKnown RBP15□□□□□ -0.01
SMARCA4-209ENST00000586122 EIF3AQ14152 1382 aaKnown RBP15□□□□□ -0.01
SMARCA4-209ENST00000586122 LRRC59Q96AG4 307 aaKnown RBP15□□□□□ -0.01
SMARCA4-209ENST00000586122 PHF23Q9BUL5 403 aaPredicted RBP15□□□□□ -0.01
SMARCA4-209ENST00000586122 TRAK1Q9UPV9 953 aa14.99□□□□□ -0.01
SMARCA4-209ENST00000586122 NPHP3Q7Z494 1330 aa14.98□□□□□ -0.01
SMARCA4-209ENST00000586122 L3MBTL2Q969R5 705 aa14.98□□□□□ -0.01
SMARCA4-209ENST00000586122 ORAI2Q96SN7 254 aa14.98□□□□□ -0.01
SMARCA4-209ENST00000586122 ANKARQ7Z5J8 1434 aa14.98□□□□□ -0.01
SMARCA4-209ENST00000586122 SOS2Q07890 1332 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-209ENST00000586122 ESCO1Q5FWF5 840 aa14.97□□□□□ -0.01
SMARCA4-209ENST00000586122 SIN3AQ96ST3 1273 aa14.97□□□□□ -0.01
SMARCA4-209ENST00000586122 NEUROD1Q13562 356 aa14.95□□□□□ -0.02
SMARCA4-209ENST00000586122 RGPD8O14715 1765 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-209ENST00000586122 TRPM1Q7Z4N2 1603 aa14.95□□□□□ -0.02
SMARCA4-209ENST00000586122 SAFB2Q14151 953 aaKnown RBP eCLIP14.94□□□□□ -0.02
SMARCA4-209ENST00000586122 TULP4Q9NRJ4 1543 aa14.93□□□□□ -0.02
SMARCA4-209ENST00000586122 PNPLA6Q8IY17 1366 aa14.93□□□□□ -0.02
SMARCA4-209ENST00000586122 TONSLQ96HA7 1378 aa14.93□□□□□ -0.02
SMARCA4-209ENST00000586122 PXDNQ92626 1479 aa14.93□□□□□ -0.02
SMARCA4-209ENST00000586122 ITSN1Q15811 1721 aa14.92□□□□□ -0.02
SMARCA4-209ENST00000586122 USP32Q8NFA0 1604 aa14.92□□□□□ -0.02
SMARCA4-209ENST00000586122 COL22A1Q8NFW1 1626 aaPredicted RBP14.92□□□□□ -0.02
SMARCA4-209ENST00000586122 NUTM2FA1L443 756 aa14.91□□□□□ -0.02
SMARCA4-209ENST00000586122 WASLO00401 505 aaPredicted RBP14.91□□□□□ -0.02
SMARCA4-209ENST00000586122 NBPF1Q3BBV0 1214 aa14.91□□□□□ -0.02
SMARCA4-209ENST00000586122 DDX17Q92841 729 aaKnown RBP14.91□□□□□ -0.02
SMARCA4-209ENST00000586122 PHF8Q9UPP1 1060 aa14.91□□□□□ -0.02
SMARCA4-209ENST00000586122 LRP6O75581 1613 aa14.91□□□□□ -0.02
SMARCA4-209ENST00000586122 MINK1Q8N4C8 1332 aaPredicted RBP14.91□□□□□ -0.02
SMARCA4-209ENST00000586122 FOXO3O43524 673 aa14.9□□□□□ -0.02
SMARCA4-209ENST00000586122 MEX3CQ5U5Q3 659 aaKnown RBP14.89□□□□□ -0.03
SMARCA4-209ENST00000586122 ILDR2Q71H61 639 aa14.89□□□□□ -0.03
SMARCA4-209ENST00000586122 CLSPNQ9HAW4 1339 aa14.89□□□□□ -0.03
SMARCA4-209ENST00000586122 CENPJQ9HC77 1338 aaPredicted RBP14.89□□□□□ -0.03
SMARCA4-209ENST00000586122 ROCK2O75116 1388 aaKnown RBP14.88□□□□□ -0.03
SMARCA4-209ENST00000586122 PSME1Q06323 249 aa14.88□□□□□ -0.03
SMARCA4-209ENST00000586122 HIRIP3Q9BW71 556 aaPredicted RBP14.88□□□□□ -0.03
SMARCA4-209ENST00000586122 QRICH2Q9H0J4 1663 aa14.87□□□□□ -0.03
SMARCA4-209ENST00000586122 GPRASP1Q5JY77 1395 aa14.87□□□□□ -0.03
SMARCA4-209ENST00000586122 SBNO1A3KN83 1393 aa14.86□□□□□ -0.03
SMARCA4-209ENST00000586122 ZNF772Q68DY9 489 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-209ENST00000586122 RGS17Q9UGC6 210 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-209ENST00000586122 ATP7BP35670 1465 aa14.86□□□□□ -0.03
SMARCA4-209ENST00000586122 RALGAPBQ86X10 1494 aa14.85□□□□□ -0.03
SMARCA4-209ENST00000586122 NUTM2BA6NNL0 878 aaPredicted RBP14.85□□□□□ -0.03
SMARCA4-209ENST00000586122 NUTM2EB1AL46 878 aaPredicted RBP14.85□□□□□ -0.03
SMARCA4-209ENST00000586122 KRT28Q7Z3Y7 464 aa14.85□□□□□ -0.03
SMARCA4-209ENST00000586122 NUTM2AQ8IVF1 878 aaPredicted RBP14.85□□□□□ -0.03
SMARCA4-209ENST00000586122 SPATA31A3Q5VYP0 1347 aa14.85□□□□□ -0.03
SMARCA4-209ENST00000586122 TNS3Q68CZ2 1445 aa14.84□□□□□ -0.03
SMARCA4-209ENST00000586122 TOPAZ1Q8N9V7 1692 aa14.84□□□□□ -0.03
SMARCA4-209ENST00000586122 PRR36Q9H6K5 1346 aa14.84□□□□□ -0.03
SMARCA4-209ENST00000586122 ARHGEF10O15013 1369 aa14.84□□□□□ -0.03
SMARCA4-209ENST00000586122 MARF1Q9Y4F3 1742 aaKnown RBP14.83□□□□□ -0.03
SMARCA4-209ENST00000586122 SOCS7O14512 581 aa14.83□□□□□ -0.04
SMARCA4-209ENST00000586122 XPCQ01831 940 aaPredicted RBP14.83□□□□□ -0.04
SMARCA4-209ENST00000586122 NUDT16Q96DE0 195 aaKnown RBP14.83□□□□□ -0.04
SMARCA4-209ENST00000586122 CDK19Q9BWU1 502 aa14.83□□□□□ -0.04
SMARCA4-209ENST00000586122 PCGF6Q9BYE7 350 aa14.83□□□□□ -0.04
SMARCA4-209ENST00000586122 TIMELESSQ9UNS1 1208 aa14.83□□□□□ -0.04
SMARCA4-209ENST00000586122 NBPF8Q3BBV2 869 aa14.82□□□□□ -0.04
SMARCA4-209ENST00000586122 CCDC61Q9Y6R9 512 aa14.82□□□□□ -0.04
SMARCA4-209ENST00000586122 TRPM3Q9HCF6 1732 aaPredicted RBP14.82□□□□□ -0.04
SMARCA4-209ENST00000586122 PMFBP1Q8TBY8 1022 aa14.81□□□□□ -0.04
SMARCA4-209ENST00000586122 SBNO2Q9Y2G9 1366 aa14.81□□□□□ -0.04
SMARCA4-209ENST00000586122 NGDNQ8NEJ9 315 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-209ENST00000586122 EVC2Q86UK5 1308 aa14.8□□□□□ -0.04
SMARCA4-209ENST00000586122 POLR3AO14802 1390 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-209ENST00000586122 AFF2P51816 1311 aa14.79□□□□□ -0.04
SMARCA4-209ENST00000586122 POTEAQ6S8J7 498 aa14.79□□□□□ -0.04
SMARCA4-209ENST00000586122 ALS2Q96Q42 1657 aa14.79□□□□□ -0.04
SMARCA4-209ENST00000586122 CARD11Q9BXL7 1154 aa14.79□□□□□ -0.04
SMARCA4-209ENST00000586122 PLEKHG3A1L390 1219 aa14.78□□□□□ -0.04
SMARCA4-209ENST00000586122 ADAMTS2O95450 1211 aa14.78□□□□□ -0.04
SMARCA4-209ENST00000586122 SRPK2P78362 688 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-209ENST00000586122 C8orf37Q96NL8 207 aa14.78□□□□□ -0.04
SMARCA4-209ENST00000586122 BRD4O60885 1362 aaPredicted RBP14.77□□□□□ -0.04
SMARCA4-209ENST00000586122 NGLY1Q96IV0 654 aa14.77□□□□□ -0.05
SMARCA4-209ENST00000586122 ABCA3Q99758 1704 aa14.77□□□□□ -0.05
SMARCA4-209ENST00000586122 FNBP4Q8N3X1 1017 aaPredicted RBP14.76□□□□□ -0.05
SMARCA4-209ENST00000586122 CDK12Q9NYV4 1490 aaPredicted RBP14.76□□□□□ -0.05
SMARCA4-209ENST00000586122 PPIP5K1Q6PFW1 1433 aa14.75□□□□□ -0.05
SMARCA4-209ENST00000586122 SLC24A1O60721 1099 aa14.75□□□□□ -0.05
SMARCA4-209ENST00000586122 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.75□□□□□ -0.05
SMARCA4-209ENST00000586122 ATAD2Q6PL18 1390 aa14.74□□□□□ -0.05
SMARCA4-209ENST00000586122 ACEP12821 1306 aa14.74□□□□□ -0.05
SMARCA4-209ENST00000586122 HAP1P54257 671 aaPredicted RBP14.74□□□□□ -0.05
SMARCA4-209ENST00000586122 LMOD2Q6P5Q4 547 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms