RNA–Protein interactions for RNA: ENST00000586084.1

PLEKHM1-214, Transcript of pleckstrin homology and RUN domain containing M1, human

TSL 4

Gene PLEKHM1, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLEKHM1-214	ENST00000586084	IFT172	Q9UG01	1749 aa		32.82	■■■□□ 2.85
PLEKHM1-214	ENST00000586084	FOXD1	Q16676	465 aa		32.8	■■■□□ 2.84
PLEKHM1-214	ENST00000586084	NPHP3	Q7Z494	1330 aa		32.79	■■■□□ 2.84
PLEKHM1-214	ENST00000586084	ESCO1	Q5FWF5	840 aa		32.78	■■■□□ 2.84
PLEKHM1-214	ENST00000586084	ANKRD30B	Q9BXX2	1392 aa		32.78	■■■□□ 2.84
PLEKHM1-214	ENST00000586084	ADGRF5	Q8IZF2	1346 aa		32.77	■■■□□ 2.84
PLEKHM1-214	ENST00000586084	USP21	Q9UK80	565 aa		32.77	■■■□□ 2.84
PLEKHM1-214	ENST00000586084	KNDC1	Q76NI1	1749 aa		32.77	■■■□□ 2.84
PLEKHM1-214	ENST00000586084	TECPR2	O15040	1411 aa		32.76	■■■□□ 2.83
PLEKHM1-214	ENST00000586084	SPATA31E1	Q6ZUB1	1445 aa		32.76	■■■□□ 2.83
PLEKHM1-214	ENST00000586084	MARF1	Q9Y4F3	1742 aa	Known RBP	32.75	■■■□□ 2.83
PLEKHM1-214	ENST00000586084	RGL3	Q3MIN7	710 aa		32.75	■■■□□ 2.83
PLEKHM1-214	ENST00000586084	TRPC5	Q9UL62	973 aa	Predicted RBP	32.74	■■■□□ 2.83
PLEKHM1-214	ENST00000586084	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.73	■■■□□ 2.83
PLEKHM1-214	ENST00000586084	PXDN	Q92626	1479 aa		32.73	■■■□□ 2.83
PLEKHM1-214	ENST00000586084	LRPPRC	P42704	1394 aa	Known RBP	32.72	■■■□□ 2.83
PLEKHM1-214	ENST00000586084	STK26	Q9P289	416 aa		32.72	■■■□□ 2.83
PLEKHM1-214	ENST00000586084	MPHOSPH9	Q99550	1183 aa		32.71	■■■□□ 2.83
PLEKHM1-214	ENST00000586084	MYOM2	P54296	1465 aa		32.7	■■■□□ 2.83
PLEKHM1-214	ENST00000586084	ABCC11	Q96J66	1382 aa		32.7	■■■□□ 2.82
PLEKHM1-214	ENST00000586084	ATAD2	Q6PL18	1390 aa		32.69	■■■□□ 2.82
PLEKHM1-214	ENST00000586084	FOXO3	O43524	673 aa		32.68	■■■□□ 2.82
PLEKHM1-214	ENST00000586084	WAPL	Q7Z5K2	1190 aa		32.68	■■■□□ 2.82
PLEKHM1-214	ENST00000586084	PIK3C2G	O75747	1445 aa		32.68	■■■□□ 2.82
PLEKHM1-214	ENST00000586084	FMN2	Q9NZ56	1722 aa		32.67	■■■□□ 2.82
PLEKHM1-214	ENST00000586084	ATRN	O75882	1429 aa		32.67	■■■□□ 2.82
PLEKHM1-214	ENST00000586084	KIF1A	Q12756	1690 aa		32.66	■■■□□ 2.82
PLEKHM1-214	ENST00000586084	TMEM132E	Q6IEE7	984 aa		32.64	■■■□□ 2.82
PLEKHM1-214	ENST00000586084	ACIN1	Q9UKV3	1341 aa	Known RBP	32.63	■■■□□ 2.81
PLEKHM1-214	ENST00000586084	XPC	Q01831	940 aa	Predicted RBP	32.63	■■■□□ 2.81
PLEKHM1-214	ENST00000586084	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.62	■■■□□ 2.81
PLEKHM1-214	ENST00000586084	NUTM2F	A1L443	756 aa		32.62	■■■□□ 2.81
PLEKHM1-214	ENST00000586084	PLEKHH1	Q9ULM0	1364 aa		32.6	■■■□□ 2.81
PLEKHM1-214	ENST00000586084	BCL9L	Q86UU0	1499 aa		32.59	■■■□□ 2.81
PLEKHM1-214	ENST00000586084	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.58	■■■□□ 2.81
PLEKHM1-214	ENST00000586084	SIRT1	Q96EB6	747 aa		32.56	■■■□□ 2.8
PLEKHM1-214	ENST00000586084	RGPD8	O14715	1765 aa	Predicted RBP	32.55	■■■□□ 2.8
PLEKHM1-214	ENST00000586084	SPATA31A3	Q5VYP0	1347 aa		32.53	■■■□□ 2.8
PLEKHM1-214	ENST00000586084	C14orf93	Q9H972	538 aa	Known RBP	32.53	■■■□□ 2.8
PLEKHM1-214	ENST00000586084	NRXN1	Q9ULB1	1477 aa		32.51	■■■□□ 2.79
PLEKHM1-214	ENST00000586084	DHX57	Q6P158	1386 aa	Known RBP	32.51	■■■□□ 2.79
PLEKHM1-214	ENST00000586084	GJD4	Q96KN9	370 aa	Predicted RBP	32.5	■■■□□ 2.79
PLEKHM1-214	ENST00000586084	KRT28	Q7Z3Y7	464 aa		32.49	■■■□□ 2.79
PLEKHM1-214	ENST00000586084	USP32	Q8NFA0	1604 aa		32.48	■■■□□ 2.79
PLEKHM1-214	ENST00000586084	CCDC125	Q86Z20	511 aa		32.46	■■■□□ 2.79
PLEKHM1-214	ENST00000586084	SLIT2	O94813	1529 aa		32.46	■■■□□ 2.79
PLEKHM1-214	ENST00000586084	PSME1	Q06323	249 aa		32.45	■■■□□ 2.79
PLEKHM1-214	ENST00000586084	UNC5CL	Q8IV45	518 aa		32.45	■■■□□ 2.79
PLEKHM1-214	ENST00000586084	PHF8	Q9UPP1	1060 aa		32.45	■■■□□ 2.79
PLEKHM1-214	ENST00000586084	CFAP70	Q5T0N1	1121 aa		32.44	■■■□□ 2.78
PLEKHM1-214	ENST00000586084	TNS3	Q68CZ2	1445 aa		32.43	■■■□□ 2.78
PLEKHM1-214	ENST00000586084	HAP1	P54257	671 aa	Predicted RBP	32.42	■■■□□ 2.78
PLEKHM1-214	ENST00000586084	GLI3	P10071	1580 aa		32.41	■■■□□ 2.78
PLEKHM1-214	ENST00000586084	PRAM1	Q96QH2	718 aa		32.4	■■■□□ 2.78
PLEKHM1-214	ENST00000586084	RALGAPB	Q86X10	1494 aa		32.4	■■■□□ 2.78
PLEKHM1-214	ENST00000586084	DLC1	Q96QB1	1528 aa		32.4	■■■□□ 2.78
PLEKHM1-214	ENST00000586084	NWD2	Q9ULI1	1742 aa		32.38	■■■□□ 2.77
PLEKHM1-214	ENST00000586084	SBNO1	A3KN83	1393 aa		32.38	■■■□□ 2.77
PLEKHM1-214	ENST00000586084	ZRANB1	Q9UGI0	708 aa		32.38	■■■□□ 2.77
PLEKHM1-214	ENST00000586084	ABCA3	Q99758	1704 aa		32.37	■■■□□ 2.77
PLEKHM1-214	ENST00000586084	PLCH1	Q4KWH8	1693 aa		32.37	■■■□□ 2.77
PLEKHM1-214	ENST00000586084	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.36	■■■□□ 2.77
PLEKHM1-214	ENST00000586084	POGK	Q9P215	609 aa		32.36	■■■□□ 2.77
PLEKHM1-214	ENST00000586084	BRWD3	Q6RI45	1802 aa		32.35	■■■□□ 2.77
PLEKHM1-214	ENST00000586084	ARHGEF10	O15013	1369 aa		32.35	■■■□□ 2.77
PLEKHM1-214	ENST00000586084	ADGRB2	O60241	1585 aa		32.35	■■■□□ 2.77
PLEKHM1-214	ENST00000586084	ANKAR	Q7Z5J8	1434 aa		32.34	■■■□□ 2.77
PLEKHM1-214	ENST00000586084	EP400	Q96L91	3159 aa		32.34	■■■□□ 2.77
PLEKHM1-214	ENST00000586084	LMOD2	Q6P5Q4	547 aa		32.32	■■■□□ 2.76
PLEKHM1-214	ENST00000586084	RAB3GAP2	Q9H2M9	1393 aa		32.32	■■■□□ 2.76
PLEKHM1-214	ENST00000586084	CABLES1	Q8TDN4	633 aa		32.31	■■■□□ 2.76
PLEKHM1-214	ENST00000586084	ADGRB1	O14514	1584 aa		32.29	■■■□□ 2.76
PLEKHM1-214	ENST00000586084	BLM	P54132	1417 aa	Predicted RBP	32.29	■■■□□ 2.76
PLEKHM1-214	ENST00000586084	VPS72	Q15906	364 aa		32.29	■■■□□ 2.76
PLEKHM1-214	ENST00000586084	PLEKHG5	O94827	1062 aa		32.27	■■■□□ 2.76
PLEKHM1-214	ENST00000586084	EIF3A	Q14152	1382 aa	Known RBP	32.27	■■■□□ 2.76
PLEKHM1-214	ENST00000586084	PMFBP1	Q8TBY8	1022 aa		32.26	■■■□□ 2.75
PLEKHM1-214	ENST00000586084	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.26	■■■□□ 2.75
PLEKHM1-214	ENST00000586084	CCDC9	Q9Y3X0	531 aa	Known RBP	32.25	■■■□□ 2.75
PLEKHM1-214	ENST00000586084	SEPT12	Q8IYM1	358 aa		32.24	■■■□□ 2.75
PLEKHM1-214	ENST00000586084	TRAK1	Q9UPV9	953 aa		32.23	■■■□□ 2.75
PLEKHM1-214	ENST00000586084	ALS2	Q96Q42	1657 aa		32.21	■■■□□ 2.75
PLEKHM1-214	ENST00000586084	GPRASP1	Q5JY77	1395 aa		32.21	■■■□□ 2.75
PLEKHM1-214	ENST00000586084	ONECUT3	O60422	494 aa	Predicted RBP	32.2	■■■□□ 2.75
PLEKHM1-214	ENST00000586084	SF3B2	Q13435	895 aa	Known RBP	32.2	■■■□□ 2.75
PLEKHM1-214	ENST00000586084	STAC3	Q96MF2	364 aa		32.2	■■■□□ 2.75
PLEKHM1-214	ENST00000586084	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.2	■■■□□ 2.75
PLEKHM1-214	ENST00000586084	TULP4	Q9NRJ4	1543 aa		32.2	■■■□□ 2.74
PLEKHM1-214	ENST00000586084	NRAP	Q86VF7	1730 aa		32.19	■■■□□ 2.74
PLEKHM1-214	ENST00000586084	DCAF11	Q8TEB1	546 aa		32.18	■■■□□ 2.74
PLEKHM1-214	ENST00000586084	KDM2A	Q9Y2K7	1162 aa		32.18	■■■□□ 2.74
PLEKHM1-214	ENST00000586084	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.18	■■■□□ 2.74
PLEKHM1-214	ENST00000586084	COL14A1	Q05707	1796 aa	Known RBP	32.17	■■■□□ 2.74
PLEKHM1-214	ENST00000586084	FAM83G	A6ND36	823 aa		32.17	■■■□□ 2.74
PLEKHM1-214	ENST00000586084	ITSN1	Q15811	1721 aa		32.15	■■■□□ 2.74
PLEKHM1-214	ENST00000586084	KRT27	Q7Z3Y8	459 aa		32.15	■■■□□ 2.74
PLEKHM1-214	ENST00000586084	WASL	O00401	505 aa	Predicted RBP	32.14	■■■□□ 2.74
PLEKHM1-214	ENST00000586084	PRR36	Q9H6K5	1346 aa		32.13	■■■□□ 2.73
PLEKHM1-214	ENST00000586084	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.12	■■■□□ 2.73
PLEKHM1-214	ENST00000586084		A0A0G2JS52	829 aa		32.11	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 15 ms