RNA–Protein interactions for RNA: ENST00000586059.5

CNN1-204, Transcript of calponin 1, humanhuman

TSL 3

Gene CNN1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-204ENST00000586059 CADPS2Q86UW7 1296 aa17.28■□□□□ 0.36
CNN1-204ENST00000586059 NBPF1Q3BBV0 1214 aa17.27■□□□□ 0.36
CNN1-204ENST00000586059 NBPF8Q3BBV2 869 aa17.26■□□□□ 0.35
CNN1-204ENST00000586059 PRAM1Q96QH2 718 aa17.26■□□□□ 0.35
CNN1-204ENST00000586059 FMN2Q9NZ56 1722 aa17.25■□□□□ 0.35
CNN1-204ENST00000586059 SAFB2Q14151 953 aaKnown RBP eCLIP17.25■□□□□ 0.35
CNN1-204ENST00000586059 SIRT1Q96EB6 747 aa17.25■□□□□ 0.35
CNN1-204ENST00000586059 POGKQ9P215 609 aa17.25■□□□□ 0.35
CNN1-204ENST00000586059 ROCK2O75116 1388 aaKnown RBP17.25■□□□□ 0.35
CNN1-204ENST00000586059 RALGAPBQ86X10 1494 aa17.24■□□□□ 0.35
CNN1-204ENST00000586059 ADGRB2O60241 1585 aa17.24■□□□□ 0.35
CNN1-204ENST00000586059 MST1RQ04912 1400 aa17.24■□□□□ 0.35
CNN1-204ENST00000586059 SLAIN2Q9P270 581 aa17.24■□□□□ 0.35
CNN1-204ENST00000586059 QRICH2Q9H0J4 1663 aa17.23■□□□□ 0.35
CNN1-204ENST00000586059 RGPD8O14715 1765 aaPredicted RBP17.22■□□□□ 0.35
CNN1-204ENST00000586059 PHLPP1O60346 1717 aa17.21■□□□□ 0.35
CNN1-204ENST00000586059 C1orf167Q5SNV9 1468 aa17.2■□□□□ 0.34
CNN1-204ENST00000586059 GPRASP1Q5JY77 1395 aa17.2■□□□□ 0.34
CNN1-204ENST00000586059 MINK1Q8N4C8 1332 aaPredicted RBP17.2■□□□□ 0.34
CNN1-204ENST00000586059 NHSL1Q5SYE7 1610 aa17.18■□□□□ 0.34
CNN1-204ENST00000586059 HSPA1LP34931 641 aa17.18■□□□□ 0.34
CNN1-204ENST00000586059 TIMELESSQ9UNS1 1208 aa17.18■□□□□ 0.34
CNN1-204ENST00000586059 HIRIP3Q9BW71 556 aaPredicted RBP17.17■□□□□ 0.34
CNN1-204ENST00000586059 AHDC1Q5TGY3 1603 aaPredicted RBP17.17■□□□□ 0.34
CNN1-204ENST00000586059 NUTM2FA1L443 756 aa17.16■□□□□ 0.34
CNN1-204ENST00000586059 CARD11Q9BXL7 1154 aa17.16■□□□□ 0.34
CNN1-204ENST00000586059 CENPJQ9HC77 1338 aaPredicted RBP17.16■□□□□ 0.34
CNN1-204ENST00000586059 EIF3AQ14152 1382 aaKnown RBP17.15■□□□□ 0.34
CNN1-204ENST00000586059 USP32Q8NFA0 1604 aa17.15■□□□□ 0.34
CNN1-204ENST00000586059 BRINP3Q76B58 766 aa17.15■□□□□ 0.34
CNN1-204ENST00000586059 COL16A1Q07092 1604 aaPredicted RBP17.14■□□□□ 0.33
CNN1-204ENST00000586059 KIF1AQ12756 1690 aa17.14■□□□□ 0.33
CNN1-204ENST00000586059 ITSN1Q15811 1721 aa17.14■□□□□ 0.33
CNN1-204ENST00000586059 TULP4Q9NRJ4 1543 aa17.14■□□□□ 0.33
CNN1-204ENST00000586059 ORAI2Q96SN7 254 aa17.11■□□□□ 0.33
CNN1-204ENST00000586059 ANKARQ7Z5J8 1434 aa17.11■□□□□ 0.33
CNN1-204ENST00000586059 WASLO00401 505 aaPredicted RBP17.1■□□□□ 0.33
CNN1-204ENST00000586059 ESCO1Q5FWF5 840 aa17.1■□□□□ 0.33
CNN1-204ENST00000586059 TOPAZ1Q8N9V7 1692 aa17.1■□□□□ 0.33
CNN1-204ENST00000586059 ATP7BP35670 1465 aa17.08■□□□□ 0.32
CNN1-204ENST00000586059 DDX17Q92841 729 aaKnown RBP17.08■□□□□ 0.32
CNN1-204ENST00000586059 PRR36Q9H6K5 1346 aa17.06■□□□□ 0.32
CNN1-204ENST00000586059 CDK19Q9BWU1 502 aa17.06■□□□□ 0.32
CNN1-204ENST00000586059 SHPRHQ149N8 1683 aa17.06■□□□□ 0.32
CNN1-204ENST00000586059 USP47Q96K76 1375 aa17.05■□□□□ 0.32
CNN1-204ENST00000586059 SBNO2Q9Y2G9 1366 aa17.04■□□□□ 0.32
CNN1-204ENST00000586059 NPHP3Q7Z494 1330 aa17.04■□□□□ 0.32
CNN1-204ENST00000586059 PHF8Q9UPP1 1060 aa17.04■□□□□ 0.32
CNN1-204ENST00000586059 EVC2Q86UK5 1308 aa17.03■□□□□ 0.32
CNN1-204ENST00000586059 SRPK2P78362 688 aaKnown RBP17.03■□□□□ 0.32
CNN1-204ENST00000586059 PXDNQ92626 1479 aa17.03■□□□□ 0.32
CNN1-204ENST00000586059 FOXO3O43524 673 aa17.02■□□□□ 0.32
CNN1-204ENST00000586059 NUDT16Q96DE0 195 aaKnown RBP17.02■□□□□ 0.32
CNN1-204ENST00000586059 JCADQ9P266 1359 aa17.02■□□□□ 0.31
CNN1-204ENST00000586059 XPCQ01831 940 aaPredicted RBP17.01■□□□□ 0.31
CNN1-204ENST00000586059 PMFBP1Q8TBY8 1022 aa17.01■□□□□ 0.31
CNN1-204ENST00000586059 CABP2Q9NPB3 220 aa17.01■□□□□ 0.31
CNN1-204ENST00000586059 MED1Q15648 1581 aaPredicted RBP17.01■□□□□ 0.31
CNN1-204ENST00000586059 SOS2Q07890 1332 aaPredicted RBP17■□□□□ 0.31
CNN1-204ENST00000586059 ST20-MTHFSA0A0A6YYL1 179 aa17■□□□□ 0.31
CNN1-204ENST00000586059 TRPM3Q9HCF6 1732 aaPredicted RBP16.99■□□□□ 0.31
CNN1-204ENST00000586059 PPIP5K1Q6PFW1 1433 aa16.98■□□□□ 0.31
CNN1-204ENST00000586059 LRRC59Q96AG4 307 aaKnown RBP16.98■□□□□ 0.31
CNN1-204ENST00000586059 CCDC61Q9Y6R9 512 aa16.97■□□□□ 0.31
CNN1-204ENST00000586059 COL22A1Q8NFW1 1626 aaPredicted RBP16.96■□□□□ 0.31
CNN1-204ENST00000586059 KRT28Q7Z3Y7 464 aa16.96■□□□□ 0.31
CNN1-204ENST00000586059 NGDNQ8NEJ9 315 aaKnown RBP16.96■□□□□ 0.31
CNN1-204ENST00000586059 PNPLA6Q8IY17 1366 aa16.96■□□□□ 0.31
CNN1-204ENST00000586059 AKAP12Q02952 1782 aa16.95■□□□□ 0.3
CNN1-204ENST00000586059 ATAD2Q6PL18 1390 aa16.95■□□□□ 0.3
CNN1-204ENST00000586059 PSME1Q06323 249 aa16.95■□□□□ 0.3
CNN1-204ENST00000586059 TESK2Q96S53 571 aa16.95■□□□□ 0.3
CNN1-204ENST00000586059 ALS2Q96Q42 1657 aa16.94■□□□□ 0.3
CNN1-204ENST00000586059 TNS3Q68CZ2 1445 aa16.94■□□□□ 0.3
CNN1-204ENST00000586059 POLR3AO14802 1390 aaPredicted RBP16.93■□□□□ 0.3
CNN1-204ENST00000586059 ACEP12821 1306 aa16.93■□□□□ 0.3
CNN1-204ENST00000586059 SPATA31A6Q5VVP1 1343 aa16.93■□□□□ 0.3
CNN1-204ENST00000586059 LRP6O75581 1613 aa16.92■□□□□ 0.3
CNN1-204ENST00000586059 SBNO1A3KN83 1393 aa16.92■□□□□ 0.3
CNN1-204ENST00000586059 PLEKHG3A1L390 1219 aa16.92■□□□□ 0.3
CNN1-204ENST00000586059 ABCA3Q99758 1704 aa16.92■□□□□ 0.3
CNN1-204ENST00000586059 DISP3Q9P2K9 1392 aa16.91■□□□□ 0.3
CNN1-204ENST00000586059 SLC24A1O60721 1099 aa16.91■□□□□ 0.3
CNN1-204ENST00000586059 EIF4G2P78344 907 aaKnown RBP eCLIP16.91■□□□□ 0.3
CNN1-204ENST00000586059 SPATA31A3Q5VYP0 1347 aa16.91■□□□□ 0.3
CNN1-204ENST00000586059 MON2Q7Z3U7 1717 aa16.9■□□□□ 0.3
CNN1-204ENST00000586059 MARF1Q9Y4F3 1742 aaKnown RBP16.9■□□□□ 0.3
CNN1-204ENST00000586059 CABP1Q9NZU7 370 aa16.9■□□□□ 0.3
CNN1-204ENST00000586059 NUTM2BA6NNL0 878 aaPredicted RBP16.89■□□□□ 0.29
CNN1-204ENST00000586059 NUTM2EB1AL46 878 aaPredicted RBP16.89■□□□□ 0.29
CNN1-204ENST00000586059 HSPA5P11021 654 aaKnown RBP16.89■□□□□ 0.29
CNN1-204ENST00000586059 TMF1P82094 1093 aa16.89■□□□□ 0.29
CNN1-204ENST00000586059 LMOD2Q6P5Q4 547 aa16.89■□□□□ 0.29
CNN1-204ENST00000586059 NUTM2AQ8IVF1 878 aaPredicted RBP16.89■□□□□ 0.29
CNN1-204ENST00000586059 ARHGEF10O15013 1369 aa16.89■□□□□ 0.29
CNN1-204ENST00000586059 PAK3O75914 559 aaPredicted RBP16.88■□□□□ 0.29
CNN1-204ENST00000586059 NRKQ7Z2Y5 1582 aa16.88■□□□□ 0.29
CNN1-204ENST00000586059 CRYBG1Q9Y4K1 1723 aa16.87■□□□□ 0.29
CNN1-204ENST00000586059 TMC1Q8TDI8 760 aa16.87■□□□□ 0.29
CNN1-204ENST00000586059 MYOM1P52179 1685 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms