RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 RBM6P78332 1123 aaKnown RBP30.02■■■□□ 2.4
CLPTM1-204ENST00000585961 XPCQ01831 940 aaPredicted RBP30.02■■■□□ 2.4
CLPTM1-204ENST00000585961 FOXO3O43524 673 aa29.99■■■□□ 2.39
CLPTM1-204ENST00000585961 USP21Q9UK80 565 aa29.97■■■□□ 2.39
CLPTM1-204ENST00000585961 CCDC144AA2RUR9 1427 aa29.96■■■□□ 2.39
CLPTM1-204ENST00000585961 PPLO60437 1756 aa29.92■■■□□ 2.38
CLPTM1-204ENST00000585961 NPHP3Q7Z494 1330 aa29.91■■■□□ 2.38
CLPTM1-204ENST00000585961 PLEKHH1Q9ULM0 1364 aa29.9■■■□□ 2.38
CLPTM1-204ENST00000585961 CDK12Q9NYV4 1490 aaPredicted RBP29.9■■■□□ 2.38
CLPTM1-204ENST00000585961 ANKRD30BQ9BXX2 1392 aa29.89■■■□□ 2.37
CLPTM1-204ENST00000585961 RGS12O14924 1447 aa29.88■■■□□ 2.37
CLPTM1-204ENST00000585961 SPATA31E1Q6ZUB1 1445 aa29.88■■■□□ 2.37
CLPTM1-204ENST00000585961 FNBP4Q8N3X1 1017 aaPredicted RBP29.88■■■□□ 2.37
CLPTM1-204ENST00000585961 TRPC5Q9UL62 973 aaPredicted RBP29.88■■■□□ 2.37
CLPTM1-204ENST00000585961 LRPPRCP42704 1394 aaKnown RBP29.88■■■□□ 2.37
CLPTM1-204ENST00000585961 PRAG1Q86YV5 1406 aa29.88■■■□□ 2.37
CLPTM1-204ENST00000585961 ABCC11Q96J66 1382 aa29.85■■■□□ 2.37
CLPTM1-204ENST00000585961 CFAP70Q5T0N1 1121 aa29.84■■■□□ 2.37
CLPTM1-204ENST00000585961 PLEKHG5O94827 1062 aa29.83■■■□□ 2.37
CLPTM1-204ENST00000585961 SAFB2Q14151 953 aaKnown RBP eCLIP29.82■■■□□ 2.36
CLPTM1-204ENST00000585961 C14orf93Q9H972 538 aaKnown RBP29.81■■■□□ 2.36
CLPTM1-204ENST00000585961 LAMC1P11047 1609 aa29.81■■■□□ 2.36
CLPTM1-204ENST00000585961 KRT28Q7Z3Y7 464 aa29.8■■■□□ 2.36
CLPTM1-204ENST00000585961 YTHDC2Q9H6S0 1430 aaKnown RBP29.78■■■□□ 2.36
CLPTM1-204ENST00000585961 PXDNQ92626 1479 aa29.76■■■□□ 2.35
CLPTM1-204ENST00000585961 TECPR2O15040 1411 aa29.76■■■□□ 2.35
CLPTM1-204ENST00000585961 PIK3C2GO75747 1445 aa29.75■■■□□ 2.35
CLPTM1-204ENST00000585961 CDC42BPGQ6DT37 1551 aa29.74■■■□□ 2.35
CLPTM1-204ENST00000585961 SIRT1Q96EB6 747 aa29.74■■■□□ 2.35
CLPTM1-204ENST00000585961 PRAM1Q96QH2 718 aa29.73■■■□□ 2.35
CLPTM1-204ENST00000585961 MYOM2P54296 1465 aa29.73■■■□□ 2.35
CLPTM1-204ENST00000585961 SPATA31A3Q5VYP0 1347 aa29.72■■■□□ 2.35
CLPTM1-204ENST00000585961 ATRNO75882 1429 aa29.72■■■□□ 2.35
CLPTM1-204ENST00000585961 GJD4Q96KN9 370 aaPredicted RBP29.72■■■□□ 2.35
CLPTM1-204ENST00000585961 PHF8Q9UPP1 1060 aa29.72■■■□□ 2.35
CLPTM1-204ENST00000585961 DHX57Q6P158 1386 aaKnown RBP29.72■■■□□ 2.35
CLPTM1-204ENST00000585961 LMOD2Q6P5Q4 547 aa29.71■■■□□ 2.35
CLPTM1-204ENST00000585961 CABLES1Q8TDN4 633 aa29.71■■■□□ 2.35
CLPTM1-204ENST00000585961 KDM2AQ9Y2K7 1162 aa29.71■■■□□ 2.35
CLPTM1-204ENST00000585961 BCL9LQ86UU0 1499 aa29.71■■■□□ 2.35
CLPTM1-204ENST00000585961 ATAD2Q6PL18 1390 aa29.7■■■□□ 2.35
CLPTM1-204ENST00000585961 POGKQ9P215 609 aa29.7■■■□□ 2.35
CLPTM1-204ENST00000585961 HAP1P54257 671 aaPredicted RBP29.68■■■□□ 2.34
CLPTM1-204ENST00000585961 PSME1Q06323 249 aa29.68■■■□□ 2.34
CLPTM1-204ENST00000585961 UNC5CLQ8IV45 518 aa29.67■■■□□ 2.34
CLPTM1-204ENST00000585961 PMFBP1Q8TBY8 1022 aa29.67■■■□□ 2.34
CLPTM1-204ENST00000585961 COL22A1Q8NFW1 1626 aaPredicted RBP29.67■■■□□ 2.34
CLPTM1-204ENST00000585961 IFT172Q9UG01 1749 aa29.65■■■□□ 2.34
CLPTM1-204ENST00000585961 TRAK1Q9UPV9 953 aa29.65■■■□□ 2.34
CLPTM1-204ENST00000585961 ACIN1Q9UKV3 1341 aaKnown RBP29.65■■■□□ 2.34
CLPTM1-204ENST00000585961 RAB3GAP2Q9H2M9 1393 aa29.64■■■□□ 2.34
CLPTM1-204ENST00000585961 HIRIP3Q9BW71 556 aaPredicted RBP29.63■■■□□ 2.33
CLPTM1-204ENST00000585961 DCAF11Q8TEB1 546 aa29.6■■■□□ 2.33
CLPTM1-204ENST00000585961 FMN2Q9NZ56 1722 aa29.57■■■□□ 2.32
CLPTM1-204ENST00000585961 MINK1Q8N4C8 1332 aaPredicted RBP29.57■■■□□ 2.32
CLPTM1-204ENST00000585961 CCDC9Q9Y3X0 531 aaKnown RBP29.57■■■□□ 2.32
CLPTM1-204ENST00000585961 KNDC1Q76NI1 1749 aa29.57■■■□□ 2.32
CLPTM1-204ENST00000585961 NRXN1Q9ULB1 1477 aa29.56■■■□□ 2.32
CLPTM1-204ENST00000585961 FAM83GA6ND36 823 aa29.54■■■□□ 2.32
CLPTM1-204ENST00000585961 ZRANB1Q9UGI0 708 aa29.53■■■□□ 2.32
CLPTM1-204ENST00000585961 RGPD8O14715 1765 aaPredicted RBP29.53■■■□□ 2.32
CLPTM1-204ENST00000585961 CCDC125Q86Z20 511 aa29.52■■■□□ 2.32
CLPTM1-204ENST00000585961 SEPT12Q8IYM1 358 aa29.52■■■□□ 2.32
CLPTM1-204ENST00000585961 RALGAPBQ86X10 1494 aa29.52■■■□□ 2.32
CLPTM1-204ENST00000585961 TNS3Q68CZ2 1445 aa29.52■■■□□ 2.32
CLPTM1-204ENST00000585961 SLIT2O94813 1529 aa29.51■■■□□ 2.32
CLPTM1-204ENST00000585961 SBNO1A3KN83 1393 aa29.5■■■□□ 2.31
CLPTM1-204ENST00000585961 VPS72Q15906 364 aa29.49■■■□□ 2.31
CLPTM1-204ENST00000585961 SRCAPQ6ZRS2 3230 aa29.49■■■□□ 2.31
CLPTM1-204ENST00000585961 MARF1Q9Y4F3 1742 aaKnown RBP29.48■■■□□ 2.31
CLPTM1-204ENST00000585961 KIF1AQ12756 1690 aa29.48■■■□□ 2.31
CLPTM1-204ENST00000585961 EP400Q96L91 3159 aa29.48■■■□□ 2.31
CLPTM1-204ENST00000585961 PRR36Q9H6K5 1346 aa29.45■■■□□ 2.31
CLPTM1-204ENST00000585961 WASLO00401 505 aaPredicted RBP29.45■■■□□ 2.31
CLPTM1-204ENST00000585961 PAK3O75914 559 aaPredicted RBP29.45■■■□□ 2.31
CLPTM1-204ENST00000585961 ARHGEF10O15013 1369 aa29.44■■■□□ 2.3
CLPTM1-204ENST00000585961 DEFB132Q7Z7B7 95 aa29.44■■■□□ 2.3
CLPTM1-204ENST00000585961 NGDNQ8NEJ9 315 aaKnown RBP29.44■■■□□ 2.3
CLPTM1-204ENST00000585961 A0A0G2JS52 829 aa29.43■■■□□ 2.3
CLPTM1-204ENST00000585961 MYT1Q01538 1121 aa29.43■■■□□ 2.3
CLPTM1-204ENST00000585961 GLI3P10071 1580 aa29.43■■■□□ 2.3
CLPTM1-204ENST00000585961 GPRASP1Q5JY77 1395 aa29.41■■■□□ 2.3
CLPTM1-204ENST00000585961 BTG4Q9NY30 223 aa29.41■■■□□ 2.3
CLPTM1-204ENST00000585961 USP32Q8NFA0 1604 aa29.41■■■□□ 2.3
CLPTM1-204ENST00000585961 DLC1Q96QB1 1528 aa29.4■■■□□ 2.3
CLPTM1-204ENST00000585961 ANKARQ7Z5J8 1434 aa29.4■■■□□ 2.3
CLPTM1-204ENST00000585961 ONECUT3O60422 494 aaPredicted RBP29.4■■■□□ 2.3
CLPTM1-204ENST00000585961 KRT27Q7Z3Y8 459 aa29.39■■■□□ 2.3
CLPTM1-204ENST00000585961 ADGRB1O14514 1584 aa29.39■■■□□ 2.29
CLPTM1-204ENST00000585961 SF3B2Q13435 895 aaKnown RBP29.38■■■□□ 2.29
CLPTM1-204ENST00000585961 FAM98CQ17RN3 349 aaKnown RBP29.38■■■□□ 2.29
CLPTM1-204ENST00000585961 STAC3Q96MF2 364 aa29.36■■■□□ 2.29
CLPTM1-204ENST00000585961 NUDT16Q96DE0 195 aaKnown RBP29.35■■■□□ 2.29
CLPTM1-204ENST00000585961 HRCP23327 699 aa29.34■■■□□ 2.29
CLPTM1-204ENST00000585961 BLMP54132 1417 aaPredicted RBP29.34■■■□□ 2.29
CLPTM1-204ENST00000585961 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.34■■■□□ 2.29
CLPTM1-204ENST00000585961 CDK19Q9BWU1 502 aa29.33■■■□□ 2.29
CLPTM1-204ENST00000585961 NUTM2GQ5VZR2 741 aa29.32■■■□□ 2.28
CLPTM1-204ENST00000585961 FAM182BQ5T319 152 aa29.31■■■□□ 2.28
CLPTM1-204ENST00000585961 EIF3AQ14152 1382 aaKnown RBP29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms