RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, human

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP1-208	ENST00000585956	CDC42BPG	Q6DT37	1551 aa		29.46	■■■□□ 2.31
PTBP1-208	ENST00000585956	COL22A1	Q8NFW1	1626 aa	Predicted RBP	29.45	■■■□□ 2.3
PTBP1-208	ENST00000585956	PLEKHH1	Q9ULM0	1364 aa		29.44	■■■□□ 2.3
PTBP1-208	ENST00000585956	PXDN	Q92626	1479 aa		29.43	■■■□□ 2.3
PTBP1-208	ENST00000585956	EP400	Q96L91	3159 aa		29.43	■■■□□ 2.3
PTBP1-208	ENST00000585956	WAPL	Q7Z5K2	1190 aa		29.43	■■■□□ 2.3
PTBP1-208	ENST00000585956	RBM6	P78332	1123 aa	Known RBP	29.42	■■■□□ 2.3
PTBP1-208	ENST00000585956	RGL3	Q3MIN7	710 aa		29.42	■■■□□ 2.3
PTBP1-208	ENST00000585956	NGLY1	Q96IV0	654 aa		29.42	■■■□□ 2.3
PTBP1-208	ENST00000585956	XPC	Q01831	940 aa	Predicted RBP	29.41	■■■□□ 2.3
PTBP1-208	ENST00000585956	STK26	Q9P289	416 aa		29.41	■■■□□ 2.3
PTBP1-208	ENST00000585956	MYOM2	P54296	1465 aa		29.4	■■■□□ 2.3
PTBP1-208	ENST00000585956	TMEM132E	Q6IEE7	984 aa		29.39	■■■□□ 2.3
PTBP1-208	ENST00000585956	CCDC144A	A2RUR9	1427 aa		29.38	■■■□□ 2.29
PTBP1-208	ENST00000585956	TECPR2	O15040	1411 aa		29.38	■■■□□ 2.29
PTBP1-208	ENST00000585956	NUTM2F	A1L443	756 aa		29.38	■■■□□ 2.29
PTBP1-208	ENST00000585956	ESCO1	Q5FWF5	840 aa		29.37	■■■□□ 2.29
PTBP1-208	ENST00000585956	MPHOSPH9	Q99550	1183 aa		29.36	■■■□□ 2.29
PTBP1-208	ENST00000585956	KNDC1	Q76NI1	1749 aa		29.35	■■■□□ 2.29
PTBP1-208	ENST00000585956	USP21	Q9UK80	565 aa		29.35	■■■□□ 2.29
PTBP1-208	ENST00000585956	LRPPRC	P42704	1394 aa	Known RBP	29.35	■■■□□ 2.29
PTBP1-208	ENST00000585956	PIK3C2G	O75747	1445 aa		29.35	■■■□□ 2.29
PTBP1-208	ENST00000585956	FNBP4	Q8N3X1	1017 aa	Predicted RBP	29.34	■■■□□ 2.29
PTBP1-208	ENST00000585956	FOXO3	O43524	673 aa		29.33	■■■□□ 2.29
PTBP1-208	ENST00000585956	ATRN	O75882	1429 aa		29.33	■■■□□ 2.29
PTBP1-208	ENST00000585956	FMN2	Q9NZ56	1722 aa		29.31	■■■□□ 2.28
PTBP1-208	ENST00000585956	MARF1	Q9Y4F3	1742 aa	Known RBP	29.31	■■■□□ 2.28
PTBP1-208	ENST00000585956	BCL9L	Q86UU0	1499 aa		29.3	■■■□□ 2.28
PTBP1-208	ENST00000585956	ABCC11	Q96J66	1382 aa		29.3	■■■□□ 2.28
PTBP1-208	ENST00000585956	NPHP3	Q7Z494	1330 aa		29.3	■■■□□ 2.28
PTBP1-208	ENST00000585956	ANKRD30B	Q9BXX2	1392 aa		29.28	■■■□□ 2.28
PTBP1-208	ENST00000585956	YTHDC2	Q9H6S0	1430 aa	Known RBP	29.27	■■■□□ 2.28
PTBP1-208	ENST00000585956	RGPD8	O14715	1765 aa	Predicted RBP	29.26	■■■□□ 2.28
PTBP1-208	ENST00000585956	TRPC5	Q9UL62	973 aa	Predicted RBP	29.26	■■■□□ 2.27
PTBP1-208	ENST00000585956	NRXN1	Q9ULB1	1477 aa		29.23	■■■□□ 2.27
PTBP1-208	ENST00000585956	ATAD2	Q6PL18	1390 aa		29.19	■■■□□ 2.26
PTBP1-208	ENST00000585956	CFAP70	Q5T0N1	1121 aa		29.19	■■■□□ 2.26
PTBP1-208	ENST00000585956	C14orf93	Q9H972	538 aa	Known RBP	29.18	■■■□□ 2.26
PTBP1-208	ENST00000585956	KIF1A	Q12756	1690 aa		29.18	■■■□□ 2.26
PTBP1-208	ENST00000585956	SPATA31A3	Q5VYP0	1347 aa		29.18	■■■□□ 2.26
PTBP1-208	ENST00000585956	GLI3	P10071	1580 aa		29.17	■■■□□ 2.26
PTBP1-208	ENST00000585956	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	29.15	■■■□□ 2.26
PTBP1-208	ENST00000585956	SLIT2	O94813	1529 aa		29.15	■■■□□ 2.26
PTBP1-208	ENST00000585956	USP32	Q8NFA0	1604 aa		29.13	■■■□□ 2.25
PTBP1-208	ENST00000585956	SAFB2	Q14151	953 aa	Known RBP eCLIP	29.13	■■■□□ 2.25
PTBP1-208	ENST00000585956	KRT28	Q7Z3Y7	464 aa		29.12	■■■□□ 2.25
PTBP1-208	ENST00000585956	GJD4	Q96KN9	370 aa	Predicted RBP	29.12	■■■□□ 2.25
PTBP1-208	ENST00000585956	RALGAPB	Q86X10	1494 aa		29.11	■■■□□ 2.25
PTBP1-208	ENST00000585956	CABLES1	Q8TDN4	633 aa		29.11	■■■□□ 2.25
PTBP1-208	ENST00000585956	ABCA3	Q99758	1704 aa		29.1	■■■□□ 2.25
PTBP1-208	ENST00000585956	PLEKHG5	O94827	1062 aa		29.09	■■■□□ 2.25
PTBP1-208	ENST00000585956	SIRT1	Q96EB6	747 aa		29.09	■■■□□ 2.25
PTBP1-208	ENST00000585956	PRAM1	Q96QH2	718 aa		29.09	■■■□□ 2.25
PTBP1-208	ENST00000585956	BRWD3	Q6RI45	1802 aa		29.08	■■■□□ 2.25
PTBP1-208	ENST00000585956	ADGRB1	O14514	1584 aa		29.08	■■■□□ 2.25
PTBP1-208	ENST00000585956	TNS3	Q68CZ2	1445 aa		29.07	■■■□□ 2.24
PTBP1-208	ENST00000585956	PHF8	Q9UPP1	1060 aa		29.07	■■■□□ 2.24
PTBP1-208	ENST00000585956	RAB3GAP2	Q9H2M9	1393 aa		29.06	■■■□□ 2.24
PTBP1-208	ENST00000585956	UNC5CL	Q8IV45	518 aa		29.06	■■■□□ 2.24
PTBP1-208	ENST00000585956	PLCH1	Q4KWH8	1693 aa		29.05	■■■□□ 2.24
PTBP1-208	ENST00000585956	DHX57	Q6P158	1386 aa	Known RBP	29.04	■■■□□ 2.24
PTBP1-208	ENST00000585956	DLC1	Q96QB1	1528 aa		29.02	■■■□□ 2.24
PTBP1-208	ENST00000585956	ADGRB2	O60241	1585 aa		29.01	■■■□□ 2.23
PTBP1-208	ENST00000585956	PMFBP1	Q8TBY8	1022 aa		29	■■■□□ 2.23
PTBP1-208	ENST00000585956	TRPM3	Q9HCF6	1732 aa	Predicted RBP	29	■■■□□ 2.23
PTBP1-208	ENST00000585956	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.99	■■■□□ 2.23
PTBP1-208	ENST00000585956	SBNO1	A3KN83	1393 aa		28.98	■■■□□ 2.23
PTBP1-208	ENST00000585956	PRR36	Q9H6K5	1346 aa		28.97	■■■□□ 2.23
PTBP1-208	ENST00000585956	NWD2	Q9ULI1	1742 aa		28.95	■■■□□ 2.23
PTBP1-208	ENST00000585956	TRAK1	Q9UPV9	953 aa		28.95	■■■□□ 2.22
PTBP1-208	ENST00000585956	LMOD2	Q6P5Q4	547 aa		28.94	■■■□□ 2.22
PTBP1-208	ENST00000585956	ANKAR	Q7Z5J8	1434 aa		28.94	■■■□□ 2.22
PTBP1-208	ENST00000585956	ALS2	Q96Q42	1657 aa		28.93	■■■□□ 2.22
PTBP1-208	ENST00000585956	FAM83G	A6ND36	823 aa		28.93	■■■□□ 2.22
PTBP1-208	ENST00000585956	POGK	Q9P215	609 aa		28.93	■■■□□ 2.22
PTBP1-208	ENST00000585956	NRAP	Q86VF7	1730 aa		28.93	■■■□□ 2.22
PTBP1-208	ENST00000585956	PSME1	Q06323	249 aa		28.92	■■■□□ 2.22
PTBP1-208	ENST00000585956	VPS72	Q15906	364 aa		28.92	■■■□□ 2.22
PTBP1-208	ENST00000585956	SEPT12	Q8IYM1	358 aa		28.92	■■■□□ 2.22
PTBP1-208	ENST00000585956	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.92	■■■□□ 2.22
PTBP1-208	ENST00000585956	DEFB132	Q7Z7B7	95 aa		28.91	■■■□□ 2.22
PTBP1-208	ENST00000585956	KDM2A	Q9Y2K7	1162 aa		28.91	■■■□□ 2.22
PTBP1-208	ENST00000585956	HAP1	P54257	671 aa	Predicted RBP	28.9	■■■□□ 2.22
PTBP1-208	ENST00000585956	CRYBG1	Q9Y4K1	1723 aa		28.89	■■■□□ 2.21
PTBP1-208	ENST00000585956	ARHGEF10	O15013	1369 aa		28.88	■■■□□ 2.21
PTBP1-208	ENST00000585956	BLM	P54132	1417 aa	Predicted RBP	28.88	■■■□□ 2.21
PTBP1-208	ENST00000585956	ZRANB1	Q9UGI0	708 aa		28.88	■■■□□ 2.21
PTBP1-208	ENST00000585956	CCDC125	Q86Z20	511 aa		28.87	■■■□□ 2.21
PTBP1-208	ENST00000585956	TULP4	Q9NRJ4	1543 aa		28.87	■■■□□ 2.21
PTBP1-208	ENST00000585956	ONECUT3	O60422	494 aa	Predicted RBP	28.86	■■■□□ 2.21
PTBP1-208	ENST00000585956	DCAF11	Q8TEB1	546 aa		28.86	■■■□□ 2.21
PTBP1-208	ENST00000585956	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.84	■■■□□ 2.21
PTBP1-208	ENST00000585956	ACIN1	Q9UKV3	1341 aa	Known RBP	28.84	■■■□□ 2.21
PTBP1-208	ENST00000585956	CCDC9	Q9Y3X0	531 aa	Known RBP	28.83	■■■□□ 2.21
PTBP1-208	ENST00000585956	WASL	O00401	505 aa	Predicted RBP	28.81	■■■□□ 2.2
PTBP1-208	ENST00000585956	BTG4	Q9NY30	223 aa		28.8	■■■□□ 2.2
PTBP1-208	ENST00000585956	ATP7B	P35670	1465 aa		28.78	■■■□□ 2.2
PTBP1-208	ENST00000585956	COL14A1	Q05707	1796 aa	Known RBP	28.78	■■■□□ 2.2
PTBP1-208	ENST00000585956	FAM98C	Q17RN3	349 aa	Known RBP	28.78	■■■□□ 2.2
PTBP1-208	ENST00000585956	KRT27	Q7Z3Y8	459 aa		28.78	■■■□□ 2.2

Retrieved 100 of 20,778 RNA–protein pairs in 245.5 ms