RNA–Protein interactions for RNA: ENST00000585535.2

PTBP1-205, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-205ENST00000585535 KNDC1Q76NI1 1749 aa16.72■□□□□ 0.27
PTBP1-205ENST00000585535 LAMC1P11047 1609 aa16.71■□□□□ 0.27
PTBP1-205ENST00000585535 NHSL1Q5SYE7 1610 aa16.71■□□□□ 0.27
PTBP1-205ENST00000585535 ORAI2Q96SN7 254 aa16.71■□□□□ 0.27
PTBP1-205ENST00000585535 CDC42BPGQ6DT37 1551 aa16.7■□□□□ 0.26
PTBP1-205ENST00000585535 SOS2Q07890 1332 aaPredicted RBP16.7■□□□□ 0.26
PTBP1-205ENST00000585535 PLEKHH1Q9ULM0 1364 aa16.69■□□□□ 0.26
PTBP1-205ENST00000585535 SHPRHQ149N8 1683 aa16.69■□□□□ 0.26
PTBP1-205ENST00000585535 KDM2AQ9Y2K7 1162 aa16.68■□□□□ 0.26
PTBP1-205ENST00000585535 DLC1Q96QB1 1528 aa16.66■□□□□ 0.26
PTBP1-205ENST00000585535 ADGRB1O14514 1584 aa16.66■□□□□ 0.26
PTBP1-205ENST00000585535 DDX17Q92841 729 aaKnown RBP16.66■□□□□ 0.26
PTBP1-205ENST00000585535 ESCO1Q5FWF5 840 aa16.64■□□□□ 0.25
PTBP1-205ENST00000585535 POTEAQ6S8J7 498 aa16.64■□□□□ 0.25
PTBP1-205ENST00000585535 PRAM1Q96QH2 718 aa16.64■□□□□ 0.25
PTBP1-205ENST00000585535 NPHP3Q7Z494 1330 aa16.64■□□□□ 0.25
PTBP1-205ENST00000585535 PNPLA6Q8IY17 1366 aa16.64■□□□□ 0.25
PTBP1-205ENST00000585535 LRP6O75581 1613 aa16.63■□□□□ 0.25
PTBP1-205ENST00000585535 POGKQ9P215 609 aa16.62■□□□□ 0.25
PTBP1-205ENST00000585535 FMN2Q9NZ56 1722 aa16.6■□□□□ 0.25
PTBP1-205ENST00000585535 FOXO3O43524 673 aa16.6■□□□□ 0.25
PTBP1-205ENST00000585535 ZNF772Q68DY9 489 aaPredicted RBP16.6■□□□□ 0.25
PTBP1-205ENST00000585535 TRAK1Q9UPV9 953 aa16.6■□□□□ 0.25
PTBP1-205ENST00000585535 MEX3CQ5U5Q3 659 aaKnown RBP16.59■□□□□ 0.25
PTBP1-205ENST00000585535 NUTM2FA1L443 756 aa16.58■□□□□ 0.24
PTBP1-205ENST00000585535 NUTM2BA6NNL0 878 aaPredicted RBP16.58■□□□□ 0.24
PTBP1-205ENST00000585535 NUTM2EB1AL46 878 aaPredicted RBP16.58■□□□□ 0.24
PTBP1-205ENST00000585535 NUTM2AQ8IVF1 878 aaPredicted RBP16.58■□□□□ 0.24
PTBP1-205ENST00000585535 PXDNQ92626 1479 aa16.58■□□□□ 0.24
PTBP1-205ENST00000585535 KIAA1210Q9ULL0 1709 aa16.56■□□□□ 0.24
PTBP1-205ENST00000585535 SAFB2Q14151 953 aaKnown RBP eCLIP16.56■□□□□ 0.24
PTBP1-205ENST00000585535 PHF8Q9UPP1 1060 aa16.56■□□□□ 0.24
PTBP1-205ENST00000585535 ANKARQ7Z5J8 1434 aa16.55■□□□□ 0.24
PTBP1-205ENST00000585535 L3MBTL2Q969R5 705 aa16.55■□□□□ 0.24
PTBP1-205ENST00000585535 ADGRB2O60241 1585 aa16.55■□□□□ 0.24
PTBP1-205ENST00000585535 WASLO00401 505 aaPredicted RBP16.54■□□□□ 0.24
PTBP1-205ENST00000585535 TRIM26Q12899 539 aaPredicted RBP16.54■□□□□ 0.24
PTBP1-205ENST00000585535 KRT28Q7Z3Y7 464 aa16.54■□□□□ 0.24
PTBP1-205ENST00000585535 KIF1AQ12756 1690 aa16.53■□□□□ 0.24
PTBP1-205ENST00000585535 COL22A1Q8NFW1 1626 aaPredicted RBP16.53■□□□□ 0.24
PTBP1-205ENST00000585535 SPATA31A3Q5VYP0 1347 aa16.53■□□□□ 0.24
PTBP1-205ENST00000585535 SIN3AQ96ST3 1273 aa16.53■□□□□ 0.24
PTBP1-205ENST00000585535 EIF3AQ14152 1382 aaKnown RBP16.52■□□□□ 0.24
PTBP1-205ENST00000585535 AFF2P51816 1311 aa16.52■□□□□ 0.24
PTBP1-205ENST00000585535 PSME1Q06323 249 aa16.52■□□□□ 0.24
PTBP1-205ENST00000585535 NBPF1Q3BBV0 1214 aa16.52■□□□□ 0.24
PTBP1-205ENST00000585535 RGPD8O14715 1765 aaPredicted RBP16.51■□□□□ 0.23
PTBP1-205ENST00000585535 MINK1Q8N4C8 1332 aaPredicted RBP16.51■□□□□ 0.23
PTBP1-205ENST00000585535 XPCQ01831 940 aaPredicted RBP16.51■□□□□ 0.23
PTBP1-205ENST00000585535 FNBP4Q8N3X1 1017 aaPredicted RBP16.51■□□□□ 0.23
PTBP1-205ENST00000585535 HIRIP3Q9BW71 556 aaPredicted RBP16.51■□□□□ 0.23
PTBP1-205ENST00000585535 NGLY1Q96IV0 654 aa16.5■□□□□ 0.23
PTBP1-205ENST00000585535 C8orf37Q96NL8 207 aa16.5■□□□□ 0.23
PTBP1-205ENST00000585535 SBNO1A3KN83 1393 aa16.5■□□□□ 0.23
PTBP1-205ENST00000585535 ADAMTS2O95450 1211 aa16.49■□□□□ 0.23
PTBP1-205ENST00000585535 RXRBP28702 533 aa16.49■□□□□ 0.23
PTBP1-205ENST00000585535 USP32Q8NFA0 1604 aa16.48■□□□□ 0.23
PTBP1-205ENST00000585535 PRR36Q9H6K5 1346 aa16.48■□□□□ 0.23
PTBP1-205ENST00000585535 ARHGEF28Q8N1W1 1705 aaKnown RBP16.48■□□□□ 0.23
PTBP1-205ENST00000585535 TULP4Q9NRJ4 1543 aa16.47■□□□□ 0.23
PTBP1-205ENST00000585535 QTRT2Q9H974 415 aaKnown RBP16.47■□□□□ 0.23
PTBP1-205ENST00000585535 NEUROD1Q13562 356 aa16.46■□□□□ 0.23
PTBP1-205ENST00000585535 PMFBP1Q8TBY8 1022 aa16.46■□□□□ 0.23
PTBP1-205ENST00000585535 CDK12Q9NYV4 1490 aaPredicted RBP16.46■□□□□ 0.23
PTBP1-205ENST00000585535 RBM6P78332 1123 aaKnown RBP16.45■□□□□ 0.22
PTBP1-205ENST00000585535 NUDT16Q96DE0 195 aaKnown RBP16.45■□□□□ 0.22
PTBP1-205ENST00000585535 CDK19Q9BWU1 502 aa16.45■□□□□ 0.22
PTBP1-205ENST00000585535 TNS3Q68CZ2 1445 aa16.45■□□□□ 0.22
PTBP1-205ENST00000585535 ARHGEF10O15013 1369 aa16.44■□□□□ 0.22
PTBP1-205ENST00000585535 CCDC61Q9Y6R9 512 aa16.44■□□□□ 0.22
PTBP1-205ENST00000585535 GPRASP1Q5JY77 1395 aa16.43■□□□□ 0.22
PTBP1-205ENST00000585535 USP21Q9UK80 565 aa16.43■□□□□ 0.22
PTBP1-205ENST00000585535 CENPJQ9HC77 1338 aaPredicted RBP16.43■□□□□ 0.22
PTBP1-205ENST00000585535 PLEKHG3A1L390 1219 aa16.42■□□□□ 0.22
PTBP1-205ENST00000585535 TRPC5Q9UL62 973 aaPredicted RBP16.42■□□□□ 0.22
PTBP1-205ENST00000585535 ATP7BP35670 1465 aa16.42■□□□□ 0.22
PTBP1-205ENST00000585535 NGDNQ8NEJ9 315 aaKnown RBP16.41■□□□□ 0.22
PTBP1-205ENST00000585535 BCL9LQ86UU0 1499 aa16.41■□□□□ 0.22
PTBP1-205ENST00000585535 POLR3AO14802 1390 aaPredicted RBP16.39■□□□□ 0.21
PTBP1-205ENST00000585535 MARF1Q9Y4F3 1742 aaKnown RBP16.39■□□□□ 0.21
PTBP1-205ENST00000585535 NBPF8Q3BBV2 869 aa16.39■□□□□ 0.21
PTBP1-205ENST00000585535 TRPM1Q7Z4N2 1603 aa16.38■□□□□ 0.21
PTBP1-205ENST00000585535 ATRNO75882 1429 aa16.38■□□□□ 0.21
PTBP1-205ENST00000585535 TRPM3Q9HCF6 1732 aaPredicted RBP16.38■□□□□ 0.21
PTBP1-205ENST00000585535 ITSN1Q15811 1721 aa16.37■□□□□ 0.21
PTBP1-205ENST00000585535 SLIT2O94813 1529 aa16.37■□□□□ 0.21
PTBP1-205ENST00000585535 LMOD2Q6P5Q4 547 aa16.37■□□□□ 0.21
PTBP1-205ENST00000585535 UNC5CLQ8IV45 518 aa16.37■□□□□ 0.21
PTBP1-205ENST00000585535 CABLES1Q8TDN4 633 aa16.37■□□□□ 0.21
PTBP1-205ENST00000585535 ROCK2O75116 1388 aaKnown RBP16.36■□□□□ 0.21
PTBP1-205ENST00000585535 ALS2Q96Q42 1657 aa16.35■□□□□ 0.21
PTBP1-205ENST00000585535 ACEP12821 1306 aa16.35■□□□□ 0.21
PTBP1-205ENST00000585535 HAP1P54257 671 aaPredicted RBP16.34■□□□□ 0.21
PTBP1-205ENST00000585535 SRPK2P78362 688 aaKnown RBP16.34■□□□□ 0.21
PTBP1-205ENST00000585535 GJD4Q96KN9 370 aaPredicted RBP16.34■□□□□ 0.21
PTBP1-205ENST00000585535 FAM83GA6ND36 823 aa16.33■□□□□ 0.2
PTBP1-205ENST00000585535 UPF1Q92900 1129 aaKnown RBP eCLIP16.33■□□□□ 0.2
PTBP1-205ENST00000585535 EVC2Q86UK5 1308 aa16.33■□□□□ 0.2
PTBP1-205ENST00000585535 BRD4O60885 1362 aaPredicted RBP16.33■□□□□ 0.2
PTBP1-205ENST00000585535 TONSLQ96HA7 1378 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms