RNA–Protein interactions for RNA: ENST00000585486.1

SPC24-202, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-202ENST00000585486 SAFB2Q14151 953 aaKnown RBP eCLIP18.68■□□□□ 0.58
SPC24-202ENST00000585486 PUS7Q96PZ0 661 aaKnown RBP18.68■□□□□ 0.58
SPC24-202ENST00000585486 POGKQ9P215 609 aa18.68■□□□□ 0.58
SPC24-202ENST00000585486 DDX10Q13206 875 aaKnown RBP18.67■□□□□ 0.58
SPC24-202ENST00000585486 STRCP1A6NGW2 1772 aa18.66■□□□□ 0.58
SPC24-202ENST00000585486 ADGRB2O60241 1585 aa18.66■□□□□ 0.58
SPC24-202ENST00000585486 MINK1Q8N4C8 1332 aaPredicted RBP18.66■□□□□ 0.58
SPC24-202ENST00000585486 EVC2Q86UK5 1308 aa18.63■□□□□ 0.57
SPC24-202ENST00000585486 NKTRP30414 1462 aaKnown RBP18.63■□□□□ 0.57
SPC24-202ENST00000585486 CDCA8Q53HL2 280 aa18.62■□□□□ 0.57
SPC24-202ENST00000585486 DIEXFQ68CQ4 756 aaKnown RBP18.62■□□□□ 0.57
SPC24-202ENST00000585486 MYOM1P52179 1685 aa18.62■□□□□ 0.57
SPC24-202ENST00000585486 WASLO00401 505 aaPredicted RBP18.61■□□□□ 0.57
SPC24-202ENST00000585486 CDK19Q9BWU1 502 aa18.61■□□□□ 0.57
SPC24-202ENST00000585486 CABP2Q9NPB3 220 aa18.6■□□□□ 0.57
SPC24-202ENST00000585486 PER1O15534 1290 aaPredicted RBP18.58■□□□□ 0.56
SPC24-202ENST00000585486 DMRT2Q9Y5R5 561 aa18.58■□□□□ 0.56
SPC24-202ENST00000585486 PRR36Q9H6K5 1346 aa18.57■□□□□ 0.56
SPC24-202ENST00000585486 ADGRL3Q9HAR2 1447 aa18.57■□□□□ 0.56
SPC24-202ENST00000585486 ZNF335Q9H4Z2 1342 aaPredicted RBP18.56■□□□□ 0.56
SPC24-202ENST00000585486 RBM33Q96EV2 1170 aaKnown RBP18.56■□□□□ 0.56
SPC24-202ENST00000585486 NALCNQ8IZF0 1738 aa18.56■□□□□ 0.56
SPC24-202ENST00000585486 NCOA3Q9Y6Q9 1424 aa18.56■□□□□ 0.56
SPC24-202ENST00000585486 ATP7BP35670 1465 aa18.55■□□□□ 0.56
SPC24-202ENST00000585486 POLR3GLQ9BT43 218 aa18.55■□□□□ 0.56
SPC24-202ENST00000585486 CD163L1Q9NR16 1453 aa18.54■□□□□ 0.56
SPC24-202ENST00000585486 USP32Q8NFA0 1604 aa18.54■□□□□ 0.56
SPC24-202ENST00000585486 SLC12A5Q9H2X9 1139 aa18.54■□□□□ 0.56
SPC24-202ENST00000585486 CDC42BPGQ6DT37 1551 aa18.54■□□□□ 0.56
SPC24-202ENST00000585486 ATAD2Q6PL18 1390 aa18.54■□□□□ 0.56
SPC24-202ENST00000585486 SRPK2P78362 688 aaKnown RBP18.53■□□□□ 0.56
SPC24-202ENST00000585486 PROSER2Q86WR7 435 aaPredicted RBP18.53■□□□□ 0.56
SPC24-202ENST00000585486 PANK3Q9H999 370 aa18.53■□□□□ 0.56
SPC24-202ENST00000585486 LRRC7Q96NW7 1537 aa18.53■□□□□ 0.56
SPC24-202ENST00000585486 TMEM94Q12767 1356 aa18.53■□□□□ 0.56
SPC24-202ENST00000585486 NUDT16Q96DE0 195 aaKnown RBP18.52■□□□□ 0.56
SPC24-202ENST00000585486 CARD14Q9BXL6 1004 aa18.52■□□□□ 0.56
SPC24-202ENST00000585486 NINLQ9Y2I6 1382 aa18.51■□□□□ 0.55
SPC24-202ENST00000585486 FMN2Q9NZ56 1722 aa18.51■□□□□ 0.55
SPC24-202ENST00000585486 XIRP1Q702N8 1843 aaKnown RBP18.51■□□□□ 0.55
SPC24-202ENST00000585486 TOPAZ1Q8N9V7 1692 aa18.5■□□□□ 0.55
SPC24-202ENST00000585486 LTBP4Q8N2S1 1624 aa18.49■□□□□ 0.55
SPC24-202ENST00000585486 ANKARQ7Z5J8 1434 aa18.49■□□□□ 0.55
SPC24-202ENST00000585486 CABP1Q9NZU7 370 aa18.48■□□□□ 0.55
SPC24-202ENST00000585486 CCDC61Q9Y6R9 512 aa18.48■□□□□ 0.55
SPC24-202ENST00000585486 CPSF1Q10570 1443 aaKnown RBP18.48■□□□□ 0.55
SPC24-202ENST00000585486 ANKRD36BQ8N2N9 1353 aa18.47■□□□□ 0.55
SPC24-202ENST00000585486 PLEKHG3A1L390 1219 aa18.47■□□□□ 0.55
SPC24-202ENST00000585486 C19orf44Q9H6X5 657 aa18.47■□□□□ 0.55
SPC24-202ENST00000585486 PPIP5K1Q6PFW1 1433 aa18.46■□□□□ 0.55
SPC24-202ENST00000585486 A0A1W2PP64 1363 aa18.45■□□□□ 0.54
SPC24-202ENST00000585486 AMER1Q5JTC6 1135 aaPredicted RBP18.45■□□□□ 0.54
SPC24-202ENST00000585486 AEBP2Q6ZN18 517 aaPredicted RBP18.45■□□□□ 0.54
SPC24-202ENST00000585486 MIER1Q8N108 512 aa18.45■□□□□ 0.54
SPC24-202ENST00000585486 TMC1Q8TDI8 760 aa18.45■□□□□ 0.54
SPC24-202ENST00000585486 DCCP43146 1447 aa18.45■□□□□ 0.54
SPC24-202ENST00000585486 NPC1L1Q9UHC9 1359 aa18.42■□□□□ 0.54
SPC24-202ENST00000585486 NUTM2FA1L443 756 aa18.42■□□□□ 0.54
SPC24-202ENST00000585486 POLR3AO14802 1390 aaPredicted RBP18.42■□□□□ 0.54
SPC24-202ENST00000585486 MST1RQ04912 1400 aa18.41■□□□□ 0.54
SPC24-202ENST00000585486 RGPD8O14715 1765 aaPredicted RBP18.41■□□□□ 0.54
SPC24-202ENST00000585486 SSH2Q76I76 1423 aa18.4■□□□□ 0.54
SPC24-202ENST00000585486 PRKRIP1Q9H875 184 aaPredicted RBP18.4■□□□□ 0.54
SPC24-202ENST00000585486 NSD3Q9BZ95 1437 aa18.4■□□□□ 0.54
SPC24-202ENST00000585486 C1orf167Q5SNV9 1468 aa18.39■□□□□ 0.54
SPC24-202ENST00000585486 TERF2IPQ9NYB0 399 aa18.39■□□□□ 0.53
SPC24-202ENST00000585486 AKAP12Q02952 1782 aa18.38■□□□□ 0.53
SPC24-202ENST00000585486 ACEP12821 1306 aa18.38■□□□□ 0.53
SPC24-202ENST00000585486 C14orf37Q86TY3 774 aa18.37■□□□□ 0.53
SPC24-202ENST00000585486 PARD3Q8TEW0 1356 aa18.37■□□□□ 0.53
SPC24-202ENST00000585486 ITSN1Q15811 1721 aa18.37■□□□□ 0.53
SPC24-202ENST00000585486 MSH6P52701 1360 aa18.36■□□□□ 0.53
SPC24-202ENST00000585486 MON2Q7Z3U7 1717 aa18.36■□□□□ 0.53
SPC24-202ENST00000585486 KNSTRNQ9Y448 316 aa18.36■□□□□ 0.53
SPC24-202ENST00000585486 HDGFL2Q7Z4V5 671 aaPredicted RBP18.35■□□□□ 0.53
SPC24-202ENST00000585486 ORAI2Q96SN7 254 aa18.35■□□□□ 0.53
SPC24-202ENST00000585486 ZNF692Q9BU19 519 aaPredicted RBP18.35■□□□□ 0.53
SPC24-202ENST00000585486 NRKQ7Z2Y5 1582 aa18.34■□□□□ 0.53
SPC24-202ENST00000585486 USP6P35125 1406 aa18.34■□□□□ 0.53
SPC24-202ENST00000585486 EDC4Q6P2E9 1401 aaKnown RBP18.34■□□□□ 0.53
SPC24-202ENST00000585486 KTN1Q86UP2 1357 aaKnown RBP18.34■□□□□ 0.53
SPC24-202ENST00000585486 ANP32CO43423 234 aa18.34■□□□□ 0.53
SPC24-202ENST00000585486 CADPS2Q86UW7 1296 aa18.34■□□□□ 0.53
SPC24-202ENST00000585486 PMFBP1Q8TBY8 1022 aa18.34■□□□□ 0.53
SPC24-202ENST00000585486 PHF8Q9UPP1 1060 aa18.34■□□□□ 0.53
SPC24-202ENST00000585486 FYB1O15117 783 aa18.33■□□□□ 0.52
SPC24-202ENST00000585486 ATF3P18847 181 aa18.33■□□□□ 0.52
SPC24-202ENST00000585486 CC2D1BQ5T0F9 858 aaKnown RBP18.31■□□□□ 0.52
SPC24-202ENST00000585486 CGNL1Q0VF96 1302 aa18.3■□□□□ 0.52
SPC24-202ENST00000585486 RALBP1Q15311 655 aa18.3■□□□□ 0.52
SPC24-202ENST00000585486 ESCO1Q5FWF5 840 aa18.3■□□□□ 0.52
SPC24-202ENST00000585486 NSD2O96028 1365 aa18.3■□□□□ 0.52
SPC24-202ENST00000585486 TTC21BQ7Z4L5 1316 aa18.29■□□□□ 0.52
SPC24-202ENST00000585486 CCER2I3L3R5 266 aa18.28■□□□□ 0.52
SPC24-202ENST00000585486 SLAIN2Q9P270 581 aa18.28■□□□□ 0.52
SPC24-202ENST00000585486 CCDC184Q52MB2 194 aa18.27■□□□□ 0.52
SPC24-202ENST00000585486 NGDNQ8NEJ9 315 aaKnown RBP18.27■□□□□ 0.52
SPC24-202ENST00000585486 KIF1AQ12756 1690 aa18.27■□□□□ 0.52
SPC24-202ENST00000585486 BRD4O60885 1362 aaPredicted RBP18.27■□□□□ 0.51
SPC24-202ENST00000585486 BRINP3Q76B58 766 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms