RNA–Protein interactions for RNA: ENST00000585339.5

RANBP3-204, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-204ENST00000585339 BCL9LQ86UU0 1499 aa11.76□□□□□ -0.53
RANBP3-204ENST00000585339 ROBO2Q9HCK4 1378 aa11.75□□□□□ -0.53
RANBP3-204ENST00000585339 KNDC1Q76NI1 1749 aa11.74□□□□□ -0.53
RANBP3-204ENST00000585339 FMN2Q9NZ56 1722 aa11.74□□□□□ -0.53
RANBP3-204ENST00000585339 NUP155O75694 1391 aa11.74□□□□□ -0.53
RANBP3-204ENST00000585339 USP32Q8NFA0 1604 aa11.74□□□□□ -0.53
RANBP3-204ENST00000585339 FNBP4Q8N3X1 1017 aaPredicted RBP11.73□□□□□ -0.53
RANBP3-204ENST00000585339 NGLY1Q96IV0 654 aa11.73□□□□□ -0.53
RANBP3-204ENST00000585339 ORAI2Q96SN7 254 aa11.73□□□□□ -0.53
RANBP3-204ENST00000585339 USP21Q9UK80 565 aa11.73□□□□□ -0.53
RANBP3-204ENST00000585339 NWD2Q9ULI1 1742 aa11.72□□□□□ -0.53
RANBP3-204ENST00000585339 NRAPQ86VF7 1730 aa11.72□□□□□ -0.53
RANBP3-204ENST00000585339 APLP2Q06481 763 aa11.71□□□□□ -0.53
RANBP3-204ENST00000585339 TRPC5Q9UL62 973 aaPredicted RBP11.71□□□□□ -0.53
RANBP3-204ENST00000585339 KIF1AQ12756 1690 aa11.71□□□□□ -0.54
RANBP3-204ENST00000585339 SLIT2O94813 1529 aa11.7□□□□□ -0.54
RANBP3-204ENST00000585339 RALGAPBQ86X10 1494 aa11.7□□□□□ -0.54
RANBP3-204ENST00000585339 TNS1Q9HBL0 1735 aaKnown RBP11.69□□□□□ -0.54
RANBP3-204ENST00000585339 ZRANB1Q9UGI0 708 aa11.68□□□□□ -0.54
RANBP3-204ENST00000585339 RGPD1P0DJD0 1748 aa11.67□□□□□ -0.54
RANBP3-204ENST00000585339 CRYBG1Q9Y4K1 1723 aa11.67□□□□□ -0.54
RANBP3-204ENST00000585339 ZNF326Q5BKZ1 582 aaKnown RBP11.67□□□□□ -0.54
RANBP3-204ENST00000585339 HFM1A2PYH4 1435 aa11.67□□□□□ -0.54
RANBP3-204ENST00000585339 BLMP54132 1417 aaPredicted RBP11.66□□□□□ -0.54
RANBP3-204ENST00000585339 TRPM3Q9HCF6 1732 aaPredicted RBP11.64□□□□□ -0.55
RANBP3-204ENST00000585339 TECPR2O15040 1411 aa11.63□□□□□ -0.55
RANBP3-204ENST00000585339 NAIPQ13075 1403 aa11.63□□□□□ -0.55
RANBP3-204ENST00000585339 XPCQ01831 940 aaPredicted RBP11.63□□□□□ -0.55
RANBP3-204ENST00000585339 DEFB132Q7Z7B7 95 aa11.63□□□□□ -0.55
RANBP3-204ENST00000585339 GJD4Q96KN9 370 aaPredicted RBP11.63□□□□□ -0.55
RANBP3-204ENST00000585339 ALS2Q96Q42 1657 aa11.62□□□□□ -0.55
RANBP3-204ENST00000585339 CCDC125Q86Z20 511 aa11.61□□□□□ -0.55
RANBP3-204ENST00000585339 NPHP3Q7Z494 1330 aa11.6□□□□□ -0.55
RANBP3-204ENST00000585339 THSD7AQ9UPZ6 1657 aa11.6□□□□□ -0.55
RANBP3-204ENST00000585339 PLEKHH1Q9ULM0 1364 aa11.6□□□□□ -0.55
RANBP3-204ENST00000585339 ITGAEP38570 1179 aa11.6□□□□□ -0.55
RANBP3-204ENST00000585339 RREB1Q92766 1687 aa11.59□□□□□ -0.55
RANBP3-204ENST00000585339 NUP188Q5SRE5 1749 aa11.58□□□□□ -0.56
RANBP3-204ENST00000585339 FOXO3O43524 673 aa11.58□□□□□ -0.56
RANBP3-204ENST00000585339 ESCO1Q5FWF5 840 aa11.58□□□□□ -0.56
RANBP3-204ENST00000585339 UNC5CLQ8IV45 518 aa11.58□□□□□ -0.56
RANBP3-204ENST00000585339 COL14A1Q05707 1796 aaKnown RBP11.57□□□□□ -0.56
RANBP3-204ENST00000585339 TNS3Q68CZ2 1445 aa11.57□□□□□ -0.56
RANBP3-204ENST00000585339 RRBP1Q9P2E9 1410 aaKnown RBP11.57□□□□□ -0.56
RANBP3-204ENST00000585339 SPATA31A3Q5VYP0 1347 aa11.57□□□□□ -0.56
RANBP3-204ENST00000585339 NUTM2FA1L443 756 aa11.56□□□□□ -0.56
RANBP3-204ENST00000585339 CCDC144AA2RUR9 1427 aa11.56□□□□□ -0.56
RANBP3-204ENST00000585339 FOXD1Q16676 465 aa11.56□□□□□ -0.56
RANBP3-204ENST00000585339 UTRNP46939 3433 aa11.56□□□□□ -0.56
RANBP3-204ENST00000585339 ADGRB2O60241 1585 aa11.55□□□□□ -0.56
RANBP3-204ENST00000585339 SPATA31E1Q6ZUB1 1445 aa11.55□□□□□ -0.56
RANBP3-204ENST00000585339 WAPLQ7Z5K2 1190 aa11.55□□□□□ -0.56
RANBP3-204ENST00000585339 LRPPRCP42704 1394 aaKnown RBP11.54□□□□□ -0.56
RANBP3-204ENST00000585339 PIK3C2GO75747 1445 aa11.54□□□□□ -0.56
RANBP3-204ENST00000585339 PHRF1Q9P1Y6 1649 aaKnown RBP11.54□□□□□ -0.56
RANBP3-204ENST00000585339 PSDA5PKW4 1024 aaPredicted RBP11.54□□□□□ -0.56
RANBP3-204ENST00000585339 VGFO15240 615 aaPredicted RBP11.54□□□□□ -0.56
RANBP3-204ENST00000585339 SEPT12Q8IYM1 358 aa11.54□□□□□ -0.56
RANBP3-204ENST00000585339 NRXN1Q9ULB1 1477 aa11.54□□□□□ -0.56
RANBP3-204ENST00000585339 ADGRF5Q8IZF2 1346 aa11.54□□□□□ -0.56
RANBP3-204ENST00000585339 VPS72Q15906 364 aa11.53□□□□□ -0.56
RANBP3-204ENST00000585339 RPGRIP1LQ68CZ1 1315 aa11.53□□□□□ -0.56
RANBP3-204ENST00000585339 ONECUT3O60422 494 aaPredicted RBP11.52□□□□□ -0.57
RANBP3-204ENST00000585339 HRCP23327 699 aa11.52□□□□□ -0.57
RANBP3-204ENST00000585339 CABLES1Q8TDN4 633 aa11.52□□□□□ -0.57
RANBP3-204ENST00000585339 ABCC11Q96J66 1382 aa11.52□□□□□ -0.57
RANBP3-204ENST00000585339 YTHDC2Q9H6S0 1430 aaKnown RBP11.52□□□□□ -0.57
RANBP3-204ENST00000585339 CAMTA1Q9Y6Y1 1673 aa11.5□□□□□ -0.57
RANBP3-204ENST00000585339 DISP2A7MBM2 1401 aa11.5□□□□□ -0.57
RANBP3-204ENST00000585339 ITSN1Q15811 1721 aa11.49□□□□□ -0.57
RANBP3-204ENST00000585339 SBF2Q86WG5 1849 aa11.49□□□□□ -0.57
RANBP3-204ENST00000585339 TMEM132EQ6IEE7 984 aa11.49□□□□□ -0.57
RANBP3-204ENST00000585339 KRT28Q7Z3Y7 464 aa11.49□□□□□ -0.57
RANBP3-204ENST00000585339 KRT27Q7Z3Y8 459 aa11.49□□□□□ -0.57
RANBP3-204ENST00000585339 PPARGC1BQ86YN6 1023 aaKnown RBP11.49□□□□□ -0.57
RANBP3-204ENST00000585339 STK26Q9P289 416 aa11.49□□□□□ -0.57
RANBP3-204ENST00000585339 SBNO1A3KN83 1393 aa11.48□□□□□ -0.57
RANBP3-204ENST00000585339 WNK3Q9BYP7 1800 aa11.46□□□□□ -0.57
RANBP3-204ENST00000585339 ARHGEF28Q8N1W1 1705 aaKnown RBP11.46□□□□□ -0.57
RANBP3-204ENST00000585339 ADGRB1O14514 1584 aa11.46□□□□□ -0.57
RANBP3-204ENST00000585339 DLC1Q96QB1 1528 aa11.46□□□□□ -0.57
RANBP3-204ENST00000585339 PLEKHG5O94827 1062 aa11.46□□□□□ -0.57
RANBP3-204ENST00000585339 EN1Q05925 392 aaPredicted RBP11.46□□□□□ -0.57
RANBP3-204ENST00000585339 SF3B2Q13435 895 aaKnown RBP11.46□□□□□ -0.57
RANBP3-204ENST00000585339 FAM182BQ5T319 152 aa11.46□□□□□ -0.57
RANBP3-204ENST00000585339 TOPAZ1Q8N9V7 1692 aa11.46□□□□□ -0.58
RANBP3-204ENST00000585339 ARHGEF10O15013 1369 aa11.45□□□□□ -0.58
RANBP3-204ENST00000585339 FAM83GA6ND36 823 aa11.45□□□□□ -0.58
RANBP3-204ENST00000585339 FAM98CQ17RN3 349 aaKnown RBP11.45□□□□□ -0.58
RANBP3-204ENST00000585339 PHF8Q9UPP1 1060 aa11.45□□□□□ -0.58
RANBP3-204ENST00000585339 RGPD3A6NKT7 1758 aaPredicted RBP11.45□□□□□ -0.58
RANBP3-204ENST00000585339 RGPD4Q7Z3J3 1758 aa11.45□□□□□ -0.58
RANBP3-204ENST00000585339 CASZ1Q86V15 1759 aa11.45□□□□□ -0.58
RANBP3-204ENST00000585339 ANKRD30BQ9BXX2 1392 aa11.44□□□□□ -0.58
RANBP3-204ENST00000585339 PARP4Q9UKK3 1724 aaKnown RBP11.44□□□□□ -0.58
RANBP3-204ENST00000585339 LMO7Q8WWI1 1683 aa11.44□□□□□ -0.58
RANBP3-204ENST00000585339 BAG6P46379 1132 aa11.44□□□□□ -0.58
RANBP3-204ENST00000585339 R3HDM1Q15032 1099 aaKnown RBP11.44□□□□□ -0.58
RANBP3-204ENST00000585339 CCDC9Q9Y3X0 531 aaKnown RBP11.44□□□□□ -0.58
RANBP3-204ENST00000585339 NRKQ7Z2Y5 1582 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms