RNA–Protein interactions for RNA: ENST00000585161.1

CDK12-210, Transcript of cyclin dependent kinase 12, humanhuman

Gene CDK12, Length 2,036 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-210ENST00000585161 HFM1A2PYH4 1435 aa16.75■□□□□ 0.27
CDK12-210ENST00000585161 GCC2Q8IWJ2 1684 aa16.75■□□□□ 0.27
CDK12-210ENST00000585161 DNTTIP2Q5QJE6 756 aaKnown RBP16.74■□□□□ 0.27
CDK12-210ENST00000585161 ABCC3O15438 1527 aa16.74■□□□□ 0.27
CDK12-210ENST00000585161 C3P01024 1663 aa16.74■□□□□ 0.27
CDK12-210ENST00000585161 SIN3AQ96ST3 1273 aa16.74■□□□□ 0.27
CDK12-210ENST00000585161 VWDEQ8N2E2 1590 aa16.73■□□□□ 0.27
CDK12-210ENST00000585161 ZC3H13Q5T200 1668 aaKnown RBP16.73■□□□□ 0.27
CDK12-210ENST00000585161 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.73■□□□□ 0.27
CDK12-210ENST00000585161 ZNF622Q969S3 477 aaKnown RBP eCLIP16.73■□□□□ 0.27
CDK12-210ENST00000585161 UNC13BO14795 1591 aa16.72■□□□□ 0.27
CDK12-210ENST00000585161 ERBB4Q15303 1308 aa16.72■□□□□ 0.27
CDK12-210ENST00000585161 ESF1Q9H501 851 aaKnown RBP16.72■□□□□ 0.27
CDK12-210ENST00000585161 DYNC1I1O14576 645 aa16.71■□□□□ 0.27
CDK12-210ENST00000585161 PTMAP06454 111 aaKnown RBP16.71■□□□□ 0.27
CDK12-210ENST00000585161 PTMSP20962 102 aa16.71■□□□□ 0.27
CDK12-210ENST00000585161 ZMYM3Q14202 1370 aa16.71■□□□□ 0.27
CDK12-210ENST00000585161 MYH16Q9H6N6 1097 aa16.7■□□□□ 0.26
CDK12-210ENST00000585161 KCNG1Q9UIX4 513 aa16.7■□□□□ 0.26
CDK12-210ENST00000585161 FAM13BQ9NYF5 915 aa16.7■□□□□ 0.26
CDK12-210ENST00000585161 CEP152O94986 1710 aa16.69■□□□□ 0.26
CDK12-210ENST00000585161 CEBPAP49715 358 aaPredicted RBP16.69■□□□□ 0.26
CDK12-210ENST00000585161 DNAJC2Q99543 621 aaKnown RBP16.69■□□□□ 0.26
CDK12-210ENST00000585161 LMTK2Q8IWU2 1503 aa16.69■□□□□ 0.26
CDK12-210ENST00000585161 GRIPAP1Q4V328 841 aa16.69■□□□□ 0.26
CDK12-210ENST00000585161 WWC1Q8IX03 1113 aa16.68■□□□□ 0.26
CDK12-210ENST00000585161 ARID3AQ99856 593 aa16.68■□□□□ 0.26
CDK12-210ENST00000585161 PRDM10Q9NQV6 1147 aa16.68■□□□□ 0.26
CDK12-210ENST00000585161 CAMSAP1Q5T5Y3 1602 aa16.67■□□□□ 0.26
CDK12-210ENST00000585161 YY1AP1Q9H869 796 aa16.67■□□□□ 0.26
CDK12-210ENST00000585161 HDAC5Q9UQL6 1122 aa16.67■□□□□ 0.26
CDK12-210ENST00000585161 PZPP20742 1482 aa16.67■□□□□ 0.26
CDK12-210ENST00000585161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.67■□□□□ 0.26
CDK12-210ENST00000585161 KANK1Q14678 1352 aa16.66■□□□□ 0.26
CDK12-210ENST00000585161 PSEN1P49768 467 aa16.66■□□□□ 0.26
CDK12-210ENST00000585161 NUDCQ9Y266 331 aa16.66■□□□□ 0.26
CDK12-210ENST00000585161 NPATQ14207 1427 aa16.65■□□□□ 0.26
CDK12-210ENST00000585161 IQGAP3Q86VI3 1631 aa16.65■□□□□ 0.26
CDK12-210ENST00000585161 PANK2Q9BZ23 570 aa16.65■□□□□ 0.26
CDK12-210ENST00000585161 ARHGAP31Q2M1Z3 1444 aa16.64■□□□□ 0.25
CDK12-210ENST00000585161 EFCAB6Q5THR3 1501 aa16.63■□□□□ 0.25
CDK12-210ENST00000585161 FAM193AP78312 1265 aa16.63■□□□□ 0.25
CDK12-210ENST00000585161 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
CDK12-210ENST00000585161 TET3O43151 1660 aa16.62■□□□□ 0.25
CDK12-210ENST00000585161 NUP155O75694 1391 aa16.61■□□□□ 0.25
CDK12-210ENST00000585161 GEMIN8Q9NWZ8 242 aaKnown RBP16.6■□□□□ 0.25
CDK12-210ENST00000585161 SETD5Q9C0A6 1442 aa16.6■□□□□ 0.25
CDK12-210ENST00000585161 SPATA31D1Q6ZQQ2 1576 aa16.6■□□□□ 0.25
CDK12-210ENST00000585161 LMTK3Q96Q04 1460 aa16.6■□□□□ 0.25
CDK12-210ENST00000585161 PREX1Q8TCU6 1659 aa16.6■□□□□ 0.25
CDK12-210ENST00000585161 SLC4A3P48751 1232 aa16.6■□□□□ 0.25
CDK12-210ENST00000585161 FBXO31Q5XUX0 539 aaPredicted RBP16.6■□□□□ 0.25
CDK12-210ENST00000585161 ERVK-7P63135 1459 aa16.59■□□□□ 0.25
CDK12-210ENST00000585161 SETD1BQ9UPS6 1966 aaKnown RBP16.59■□□□□ 0.25
CDK12-210ENST00000585161 ZSCAN30Q86W11 494 aa16.58■□□□□ 0.25
CDK12-210ENST00000585161 TICAM2Q86XR7 235 aa16.58■□□□□ 0.24
CDK12-210ENST00000585161 MYO3AQ8NEV4 1616 aa16.57■□□□□ 0.24
CDK12-210ENST00000585161 RPRD2Q5VT52 1461 aaKnown RBP16.57■□□□□ 0.24
CDK12-210ENST00000585161 GRPEL1Q9HAV7 217 aa16.57■□□□□ 0.24
CDK12-210ENST00000585161 SLC52A1Q9NWF4 448 aa16.57■□□□□ 0.24
CDK12-210ENST00000585161 RAB3GAP2Q9H2M9 1393 aa16.56■□□□□ 0.24
CDK12-210ENST00000585161 IRX5P78411 483 aaPredicted RBP16.56■□□□□ 0.24
CDK12-210ENST00000585161 E9PCH4 1651 aa16.56■□□□□ 0.24
CDK12-210ENST00000585161 TNRQ92752 1358 aa16.56■□□□□ 0.24
CDK12-210ENST00000585161 VIRMAQ69YN4 1812 aaKnown RBP16.56■□□□□ 0.24
CDK12-210ENST00000585161 UHRF1BP1Q6BDS2 1440 aa16.56■□□□□ 0.24
CDK12-210ENST00000585161 UQCRHLA0A096LP55 91 aa16.55■□□□□ 0.24
CDK12-210ENST00000585161 APPP05067 770 aa16.55■□□□□ 0.24
CDK12-210ENST00000585161 UQCRHP07919 91 aa16.55■□□□□ 0.24
CDK12-210ENST00000585161 MCCP23508 829 aa16.55■□□□□ 0.24
CDK12-210ENST00000585161 HSPA2P54652 639 aa16.55■□□□□ 0.24
CDK12-210ENST00000585161 PHF14O94880 888 aa16.55■□□□□ 0.24
CDK12-210ENST00000585161 NOS1P29475 1434 aa16.55■□□□□ 0.24
CDK12-210ENST00000585161 TSPYL1Q9H0U9 437 aa16.54■□□□□ 0.24
CDK12-210ENST00000585161 ZNF142P52746 1687 aaPredicted RBP16.54■□□□□ 0.24
CDK12-210ENST00000585161 RALBP1Q15311 655 aa16.53■□□□□ 0.24
CDK12-210ENST00000585161 SYNMO15061 1565 aa16.52■□□□□ 0.24
CDK12-210ENST00000585161 CEP170BQ9Y4F5 1589 aaPredicted RBP16.52■□□□□ 0.24
CDK12-210ENST00000585161 TAOK2Q9UL54 1235 aa16.52■□□□□ 0.24
CDK12-210ENST00000585161 CFAP65Q6ZU64 1925 aaKnown RBP16.52■□□□□ 0.23
CDK12-210ENST00000585161 NLRP1Q9C000 1473 aa16.52■□□□□ 0.23
CDK12-210ENST00000585161 SOX12O15370 315 aa16.52■□□□□ 0.23
CDK12-210ENST00000585161 KCNA4P22459 653 aa16.52■□□□□ 0.23
CDK12-210ENST00000585161 HS1BP3Q53T59 392 aa16.51■□□□□ 0.23
CDK12-210ENST00000585161 CEP120Q8N960 986 aa16.51■□□□□ 0.23
CDK12-210ENST00000585161 CGNQ9P2M7 1197 aaKnown RBP16.51■□□□□ 0.23
CDK12-210ENST00000585161 CCDC173Q0VFZ6 552 aa16.5■□□□□ 0.23
CDK12-210ENST00000585161 CCDC9Q9Y3X0 531 aaKnown RBP16.5■□□□□ 0.23
CDK12-210ENST00000585161 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.5■□□□□ 0.23
CDK12-210ENST00000585161 A2ML1A8K2U0 1454 aa16.5■□□□□ 0.23
CDK12-210ENST00000585161 MSNP26038 577 aaKnown RBP16.5■□□□□ 0.23
CDK12-210ENST00000585161 BECN1Q14457 450 aa16.5■□□□□ 0.23
CDK12-210ENST00000585161 CSPP1Q1MSJ5 1256 aa16.5■□□□□ 0.23
CDK12-210ENST00000585161 PPP1R9BQ96SB3 815 aa16.49■□□□□ 0.23
CDK12-210ENST00000585161 ZNF500O60304 480 aaPredicted RBP16.48■□□□□ 0.23
CDK12-210ENST00000585161 MYCNP04198 464 aaPredicted RBP16.48■□□□□ 0.23
CDK12-210ENST00000585161 E9PSI1 815 aa16.48■□□□□ 0.23
CDK12-210ENST00000585161 FAM161AQ3B820 660 aa16.48■□□□□ 0.23
CDK12-210ENST00000585161 CC2D1BQ5T0F9 858 aaKnown RBP16.48■□□□□ 0.23
CDK12-210ENST00000585161 R3HCC1Q9Y3T6 440 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms