RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 YTHDC2Q9H6S0 1430 aaKnown RBP25.15■■□□□ 1.62
ITGB4-213ENST00000584939 NUTM2BA6NNL0 878 aaPredicted RBP25.14■■□□□ 1.62
ITGB4-213ENST00000584939 NUTM2EB1AL46 878 aaPredicted RBP25.14■■□□□ 1.62
ITGB4-213ENST00000584939 NUTM2AQ8IVF1 878 aaPredicted RBP25.14■■□□□ 1.62
ITGB4-213ENST00000584939 NHSL1Q5SYE7 1610 aa25.14■■□□□ 1.61
ITGB4-213ENST00000584939 SHPRHQ149N8 1683 aa25.13■■□□□ 1.61
ITGB4-213ENST00000584939 PLEKHH1Q9ULM0 1364 aa25.13■■□□□ 1.61
ITGB4-213ENST00000584939 DHX57Q6P158 1386 aaKnown RBP25.11■■□□□ 1.61
ITGB4-213ENST00000584939 SIRT1Q96EB6 747 aa25.11■■□□□ 1.61
ITGB4-213ENST00000584939 ESCO1Q5FWF5 840 aa25.1■■□□□ 1.61
ITGB4-213ENST00000584939 KDM2AQ9Y2K7 1162 aa25.1■■□□□ 1.61
ITGB4-213ENST00000584939 DCAF11Q8TEB1 546 aa25.09■■□□□ 1.61
ITGB4-213ENST00000584939 CDC42BPGQ6DT37 1551 aa25.09■■□□□ 1.61
ITGB4-213ENST00000584939 NUTM2FA1L443 756 aa25.08■■□□□ 1.61
ITGB4-213ENST00000584939 SOS2Q07890 1332 aaPredicted RBP25.08■■□□□ 1.6
ITGB4-213ENST00000584939 PNPLA6Q8IY17 1366 aa25.07■■□□□ 1.6
ITGB4-213ENST00000584939 KNDC1Q76NI1 1749 aa25.07■■□□□ 1.6
ITGB4-213ENST00000584939 ZNF772Q68DY9 489 aaPredicted RBP25.05■■□□□ 1.6
ITGB4-213ENST00000584939 LAMC1P11047 1609 aa25.04■■□□□ 1.6
ITGB4-213ENST00000584939 STAC3Q96MF2 364 aa25.04■■□□□ 1.6
ITGB4-213ENST00000584939 PRAM1Q96QH2 718 aa25.03■■□□□ 1.6
ITGB4-213ENST00000584939 SAFB2Q14151 953 aaKnown RBP eCLIP25.02■■□□□ 1.6
ITGB4-213ENST00000584939 NPHP3Q7Z494 1330 aa25.02■■□□□ 1.6
ITGB4-213ENST00000584939 FOXO3O43524 673 aa25.01■■□□□ 1.59
ITGB4-213ENST00000584939 POGKQ9P215 609 aa25■■□□□ 1.59
ITGB4-213ENST00000584939 XPCQ01831 940 aaPredicted RBP24.98■■□□□ 1.59
ITGB4-213ENST00000584939 C8orf37Q96NL8 207 aa24.98■■□□□ 1.59
ITGB4-213ENST00000584939 TRAK1Q9UPV9 953 aa24.98■■□□□ 1.59
ITGB4-213ENST00000584939 AFF2P51816 1311 aa24.97■■□□□ 1.59
ITGB4-213ENST00000584939 ADGRB1O14514 1584 aa24.97■■□□□ 1.59
ITGB4-213ENST00000584939 ADAMTS2O95450 1211 aa24.96■■□□□ 1.59
ITGB4-213ENST00000584939 DLC1Q96QB1 1528 aa24.96■■□□□ 1.59
ITGB4-213ENST00000584939 FMN2Q9NZ56 1722 aa24.94■■□□□ 1.58
ITGB4-213ENST00000584939 PXDNQ92626 1479 aa24.94■■□□□ 1.58
ITGB4-213ENST00000584939 RXRBP28702 533 aa24.92■■□□□ 1.58
ITGB4-213ENST00000584939 NGLY1Q96IV0 654 aa24.92■■□□□ 1.58
ITGB4-213ENST00000584939 PHF8Q9UPP1 1060 aa24.91■■□□□ 1.58
ITGB4-213ENST00000584939 KRT28Q7Z3Y7 464 aa24.89■■□□□ 1.58
ITGB4-213ENST00000584939 HIRIP3Q9BW71 556 aaPredicted RBP24.89■■□□□ 1.58
ITGB4-213ENST00000584939 MINK1Q8N4C8 1332 aaPredicted RBP24.87■■□□□ 1.57
ITGB4-213ENST00000584939 QTRT2Q9H974 415 aaKnown RBP24.87■■□□□ 1.57
ITGB4-213ENST00000584939 SPATA31A3Q5VYP0 1347 aa24.86■■□□□ 1.57
ITGB4-213ENST00000584939 COL22A1Q8NFW1 1626 aaPredicted RBP24.85■■□□□ 1.57
ITGB4-213ENST00000584939 KIF1AQ12756 1690 aa24.85■■□□□ 1.57
ITGB4-213ENST00000584939 PSME1Q06323 249 aa24.84■■□□□ 1.57
ITGB4-213ENST00000584939 TRIM26Q12899 539 aaPredicted RBP24.84■■□□□ 1.57
ITGB4-213ENST00000584939 ANKARQ7Z5J8 1434 aa24.84■■□□□ 1.57
ITGB4-213ENST00000584939 ADGRB2O60241 1585 aa24.82■■□□□ 1.56
ITGB4-213ENST00000584939 PMFBP1Q8TBY8 1022 aa24.82■■□□□ 1.56
ITGB4-213ENST00000584939 USP21Q9UK80 565 aa24.82■■□□□ 1.56
ITGB4-213ENST00000584939 WASLO00401 505 aaPredicted RBP24.81■■□□□ 1.56
ITGB4-213ENST00000584939 RBM6P78332 1123 aaKnown RBP24.81■■□□□ 1.56
ITGB4-213ENST00000584939 FNBP4Q8N3X1 1017 aaPredicted RBP24.81■■□□□ 1.56
ITGB4-213ENST00000584939 RGPD8O14715 1765 aaPredicted RBP24.8■■□□□ 1.56
ITGB4-213ENST00000584939 EIF3AQ14152 1382 aaKnown RBP24.8■■□□□ 1.56
ITGB4-213ENST00000584939 CDK12Q9NYV4 1490 aaPredicted RBP24.78■■□□□ 1.56
ITGB4-213ENST00000584939 NBPF1Q3BBV0 1214 aa24.78■■□□□ 1.56
ITGB4-213ENST00000584939 PRR36Q9H6K5 1346 aa24.78■■□□□ 1.56
ITGB4-213ENST00000584939 USP32Q8NFA0 1604 aa24.77■■□□□ 1.56
ITGB4-213ENST00000584939 SIN3AQ96ST3 1273 aa24.77■■□□□ 1.56
ITGB4-213ENST00000584939 LMOD2Q6P5Q4 547 aa24.76■■□□□ 1.55
ITGB4-213ENST00000584939 L3MBTL2Q969R5 705 aa24.76■■□□□ 1.55
ITGB4-213ENST00000584939 TRPC5Q9UL62 973 aaPredicted RBP24.76■■□□□ 1.55
ITGB4-213ENST00000584939 SBNO1A3KN83 1393 aa24.76■■□□□ 1.55
ITGB4-213ENST00000584939 TNS3Q68CZ2 1445 aa24.76■■□□□ 1.55
ITGB4-213ENST00000584939 TULP4Q9NRJ4 1543 aa24.75■■□□□ 1.55
ITGB4-213ENST00000584939 ARHGEF28Q8N1W1 1705 aaKnown RBP24.73■■□□□ 1.55
ITGB4-213ENST00000584939 PLEKHG5O94827 1062 aa24.73■■□□□ 1.55
ITGB4-213ENST00000584939 HAP1P54257 671 aaPredicted RBP24.73■■□□□ 1.55
ITGB4-213ENST00000584939 NEUROD1Q13562 356 aa24.73■■□□□ 1.55
ITGB4-213ENST00000584939 KIAA1210Q9ULL0 1709 aa24.72■■□□□ 1.55
ITGB4-213ENST00000584939 CABLES1Q8TDN4 633 aa24.72■■□□□ 1.55
ITGB4-213ENST00000584939 RGS12O14924 1447 aa24.71■■□□□ 1.55
ITGB4-213ENST00000584939 ARHGEF10O15013 1369 aa24.71■■□□□ 1.55
ITGB4-213ENST00000584939 GPRASP1Q5JY77 1395 aa24.71■■□□□ 1.55
ITGB4-213ENST00000584939 NGDNQ8NEJ9 315 aaKnown RBP24.71■■□□□ 1.55
ITGB4-213ENST00000584939 NUDT16Q96DE0 195 aaKnown RBP24.71■■□□□ 1.55
ITGB4-213ENST00000584939 CDK19Q9BWU1 502 aa24.71■■□□□ 1.55
ITGB4-213ENST00000584939 BCL9LQ86UU0 1499 aa24.7■■□□□ 1.55
ITGB4-213ENST00000584939 UPF1Q92900 1129 aaKnown RBP eCLIP24.7■■□□□ 1.54
ITGB4-213ENST00000584939 ATRNO75882 1429 aa24.69■■□□□ 1.54
ITGB4-213ENST00000584939 UNC5CLQ8IV45 518 aa24.65■■□□□ 1.54
ITGB4-213ENST00000584939 MARF1Q9Y4F3 1742 aaKnown RBP24.65■■□□□ 1.54
ITGB4-213ENST00000584939 ATP7BP35670 1465 aa24.64■■□□□ 1.54
ITGB4-213ENST00000584939 CENPJQ9HC77 1338 aaPredicted RBP24.63■■□□□ 1.53
ITGB4-213ENST00000584939 SLIT2O94813 1529 aa24.63■■□□□ 1.53
ITGB4-213ENST00000584939 PAK3O75914 559 aaPredicted RBP24.63■■□□□ 1.53
ITGB4-213ENST00000584939 GJD4Q96KN9 370 aaPredicted RBP24.63■■□□□ 1.53
ITGB4-213ENST00000584939 CCDC61Q9Y6R9 512 aa24.62■■□□□ 1.53
ITGB4-213ENST00000584939 TRPM3Q9HCF6 1732 aaPredicted RBP24.61■■□□□ 1.53
ITGB4-213ENST00000584939 FAM83GA6ND36 823 aa24.59■■□□□ 1.53
ITGB4-213ENST00000584939 SRPK2P78362 688 aaKnown RBP24.59■■□□□ 1.53
ITGB4-213ENST00000584939 PLEKHG3A1L390 1219 aa24.58■■□□□ 1.53
ITGB4-213ENST00000584939 ACEP12821 1306 aa24.58■■□□□ 1.52
ITGB4-213ENST00000584939 NBPF8Q3BBV2 869 aa24.57■■□□□ 1.52
ITGB4-213ENST00000584939 CABP2Q9NPB3 220 aa24.56■■□□□ 1.52
ITGB4-213ENST00000584939 ALS2Q96Q42 1657 aa24.56■■□□□ 1.52
ITGB4-213ENST00000584939 POLR3AO14802 1390 aaPredicted RBP24.55■■□□□ 1.52
ITGB4-213ENST00000584939 ROCK2O75116 1388 aaKnown RBP24.55■■□□□ 1.52
ITGB4-213ENST00000584939 ITSN1Q15811 1721 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms