RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 MYT1Q01538 1121 aa7.87□□□□□ -1.15
VAPA-208ENST00000584796 HLA-CQ95604 372 aa7.87□□□□□ -1.15
VAPA-208ENST00000584796 CD2BP2O95400 341 aaKnown RBP7.86□□□□□ -1.15
VAPA-208ENST00000584796 USB1Q9BQ65 265 aaKnown RBP7.86□□□□□ -1.15
VAPA-208ENST00000584796 FAM187AA6NFU0 413 aa7.85□□□□□ -1.15
VAPA-208ENST00000584796 ZMYND10O75800 440 aa7.85□□□□□ -1.15
VAPA-208ENST00000584796 DXOO77932 396 aaKnown RBP7.85□□□□□ -1.15
VAPA-208ENST00000584796 BARGINQ6ZT62 677 aa7.85□□□□□ -1.15
VAPA-208ENST00000584796 FOXC1Q12948 553 aa7.84□□□□□ -1.15
VAPA-208ENST00000584796 REPIN1Q9BWE0 567 aaKnown RBP7.84□□□□□ -1.15
VAPA-208ENST00000584796 ZNF787Q6DD87 383 aa7.83□□□□□ -1.16
VAPA-208ENST00000584796 TOR4AQ9NXH8 423 aa7.83□□□□□ -1.16
VAPA-208ENST00000584796 GUCA2AQ02747 115 aa7.82□□□□□ -1.16
VAPA-208ENST00000584796 ZC3H15Q8WU90 426 aaKnown RBP7.82□□□□□ -1.16
VAPA-208ENST00000584796 ZBTB24O43167 697 aaPredicted RBP7.81□□□□□ -1.16
VAPA-208ENST00000584796 AMHR2Q16671 573 aa7.81□□□□□ -1.16
VAPA-208ENST00000584796 KRI1Q8N9T8 703 aaKnown RBP7.81□□□□□ -1.16
VAPA-208ENST00000584796 TRIM32Q13049 653 aa7.8□□□□□ -1.16
VAPA-208ENST00000584796 NUTM1Q86Y26 1132 aa7.8□□□□□ -1.16
VAPA-208ENST00000584796 AVPP01185 164 aa7.79□□□□□ -1.16
VAPA-208ENST00000584796 SSTR3P32745 418 aaPredicted RBP7.79□□□□□ -1.16
VAPA-208ENST00000584796 CRIPAKQ8N1N5 446 aa7.79□□□□□ -1.16
VAPA-208ENST00000584796 AAASQ9NRG9 546 aa7.79□□□□□ -1.16
VAPA-208ENST00000584796 WNT7AO00755 349 aa7.78□□□□□ -1.16
VAPA-208ENST00000584796 RETREG3Q86VR2 466 aa7.78□□□□□ -1.16
VAPA-208ENST00000584796 CYP4X1Q8N118 509 aa7.78□□□□□ -1.16
VAPA-208ENST00000584796 SYMPKQ92797 1274 aaKnown RBP7.78□□□□□ -1.16
VAPA-208ENST00000584796 ST8SIA5O15466 376 aa7.77□□□□□ -1.17
VAPA-208ENST00000584796 FDX1P10109 184 aa7.77□□□□□ -1.17
VAPA-208ENST00000584796 JUNDP17535 347 aa7.77□□□□□ -1.17
VAPA-208ENST00000584796 TTLL12Q14166 644 aaPredicted RBP7.77□□□□□ -1.17
VAPA-208ENST00000584796 SPIRE2Q8WWL2 714 aa7.77□□□□□ -1.17
VAPA-208ENST00000584796 PCDHGC3Q9UN70 934 aa7.77□□□□□ -1.17
VAPA-208ENST00000584796 POTECB2RU33 542 aa7.76□□□□□ -1.17
VAPA-208ENST00000584796 GIGYF2Q6Y7W6 1299 aaKnown RBP7.76□□□□□ -1.17
VAPA-208ENST00000584796 TTC24A2A3L6 582 aaPredicted RBP7.74□□□□□ -1.17
VAPA-208ENST00000584796 SMCPP49901 116 aaPredicted RBP7.74□□□□□ -1.17
VAPA-208ENST00000584796 CTC1Q2NKJ3 1217 aa7.74□□□□□ -1.17
VAPA-208ENST00000584796 CCDC24Q8N4L8 307 aa7.74□□□□□ -1.17
VAPA-208ENST00000584796 SNIP1Q8TAD8 396 aaKnown RBP7.74□□□□□ -1.17
VAPA-208ENST00000584796 ZNF775Q96BV0 537 aaPredicted RBP7.74□□□□□ -1.17
VAPA-208ENST00000584796 MRGPRX2Q96LB1 330 aa7.74□□□□□ -1.17
VAPA-208ENST00000584796 MOXD2PA6NHM9 499 aa7.73□□□□□ -1.17
VAPA-208ENST00000584796 WNT7BP56706 349 aa7.73□□□□□ -1.17
VAPA-208ENST00000584796 SKOR1P84550 965 aa7.73□□□□□ -1.17
VAPA-208ENST00000584796 C6orf229H3BNL8 230 aa7.72□□□□□ -1.17
VAPA-208ENST00000584796 TRIM66O15016 1216 aa7.72□□□□□ -1.17
VAPA-208ENST00000584796 SMPD1P17405 629 aa7.72□□□□□ -1.17
VAPA-208ENST00000584796 NDUFV2P19404 249 aa7.72□□□□□ -1.17
VAPA-208ENST00000584796 PARP9Q8IXQ6 854 aa7.72□□□□□ -1.17
VAPA-208ENST00000584796 NUDT12Q9BQG2 462 aa7.72□□□□□ -1.17
VAPA-208ENST00000584796 AXIN1O15169 862 aa7.71□□□□□ -1.18
VAPA-208ENST00000584796 GJA5P36382 358 aa7.71□□□□□ -1.18
VAPA-208ENST00000584796 BEGAINQ9BUH8 593 aa7.71□□□□□ -1.18
VAPA-208ENST00000584796 RC3H1Q5TC82 1133 aaKnown RBP7.7□□□□□ -1.18
VAPA-208ENST00000584796 PTCRAQ6ISU1 281 aaPredicted RBP7.7□□□□□ -1.18
VAPA-208ENST00000584796 DACH1Q9UI36 760 aa7.7□□□□□ -1.18
VAPA-208ENST00000584796 J3QL48 77 aa7.69□□□□□ -1.18
VAPA-208ENST00000584796 CCNYL3P0C7X3 344 aa7.69□□□□□ -1.18
VAPA-208ENST00000584796 MS4A1P11836 297 aa7.69□□□□□ -1.18
VAPA-208ENST00000584796 PTPRNQ16849 979 aa7.69□□□□□ -1.18
VAPA-208ENST00000584796 AK7Q96M32 723 aa7.69□□□□□ -1.18
VAPA-208ENST00000584796 TBC1D2Q9BYX2 928 aa7.69□□□□□ -1.18
VAPA-208ENST00000584796 SPDYE5A6NIY4 337 aa7.68□□□□□ -1.18
VAPA-208ENST00000584796 MTMR2Q13614 643 aa7.68□□□□□ -1.18
VAPA-208ENST00000584796 DIXDC1Q155Q3 683 aa7.68□□□□□ -1.18
VAPA-208ENST00000584796 DESI1Q6ICB0 168 aa7.68□□□□□ -1.18
VAPA-208ENST00000584796 RSBN1LQ6PCB5 846 aaPredicted RBP7.67□□□□□ -1.18
VAPA-208ENST00000584796 PRR7Q8TB68 274 aa7.67□□□□□ -1.18
VAPA-208ENST00000584796 EVA1BQ9NVM1 165 aa7.66□□□□□ -1.18
VAPA-208ENST00000584796 GMPR2Q9P2T1 348 aaKnown RBP7.66□□□□□ -1.18
VAPA-208ENST00000584796 SPTLC1O15269 473 aa7.65□□□□□ -1.18
VAPA-208ENST00000584796 SIAH2O43255 324 aa7.65□□□□□ -1.18
VAPA-208ENST00000584796 SH3BP2P78314 561 aa7.65□□□□□ -1.18
VAPA-208ENST00000584796 HPS1Q92902 700 aa7.65□□□□□ -1.18
VAPA-208ENST00000584796 UNC93B1Q9H1C4 597 aa7.65□□□□□ -1.18
VAPA-208ENST00000584796 KCNH2Q12809 1159 aa7.64□□□□□ -1.19
VAPA-208ENST00000584796 PCDHB15Q9Y5E8 787 aa7.64□□□□□ -1.19
VAPA-208ENST00000584796 EHBP1Q8NDI1 1231 aa7.63□□□□□ -1.19
VAPA-208ENST00000584796 ATP13A2Q9NQ11 1180 aa7.63□□□□□ -1.19
VAPA-208ENST00000584796 C11orf95C9JLR9 678 aaPredicted RBP7.62□□□□□ -1.19
VAPA-208ENST00000584796 CFAP99D6REC4 459 aa7.62□□□□□ -1.19
VAPA-208ENST00000584796 ALDH1A1P00352 501 aa7.62□□□□□ -1.19
VAPA-208ENST00000584796 PDE4DQ08499 809 aa7.62□□□□□ -1.19
VAPA-208ENST00000584796 LCE2AQ5TA79 106 aaPredicted RBP7.62□□□□□ -1.19
VAPA-208ENST00000584796 PRPF38BQ5VTL8 546 aaKnown RBP7.62□□□□□ -1.19
VAPA-208ENST00000584796 ZBTB3Q9H5J0 574 aa7.62□□□□□ -1.19
VAPA-208ENST00000584796 HRCP23327 699 aa7.61□□□□□ -1.19
VAPA-208ENST00000584796 LYPD8Q6UX82 237 aa7.61□□□□□ -1.19
VAPA-208ENST00000584796 RIC3Q7Z5B4 369 aa7.61□□□□□ -1.19
VAPA-208ENST00000584796 TREML4Q6UXN2 200 aa7.6□□□□□ -1.19
VAPA-208ENST00000584796 ZNF511Q8NB15 262 aa7.6□□□□□ -1.19
VAPA-208ENST00000584796 BAP1Q92560 729 aa7.6□□□□□ -1.19
VAPA-208ENST00000584796 TUSC1Q2TAM9 212 aa7.59□□□□□ -1.19
VAPA-208ENST00000584796 LINC01559Q495D7 138 aa7.59□□□□□ -1.19
VAPA-208ENST00000584796 MYSM1Q5VVJ2 828 aa7.59□□□□□ -1.19
VAPA-208ENST00000584796 TRIM47Q96LD4 638 aa7.59□□□□□ -1.19
VAPA-208ENST00000584796 SLC24A3Q9HC58 644 aa7.59□□□□□ -1.19
VAPA-208ENST00000584796 F12P00748 615 aaPredicted RBP7.58□□□□□ -1.2
VAPA-208ENST00000584796 MPNDQ8N594 471 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms