RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 NRXN1Q9ULB1 1477 aa19.63■□□□□ 0.73
SREBF1-223ENST00000584760 RBM6P78332 1123 aaKnown RBP19.62■□□□□ 0.73
SREBF1-223ENST00000584760 ADGRL3Q9HAR2 1447 aa19.61■□□□□ 0.73
SREBF1-223ENST00000584760 PNPLA6Q8IY17 1366 aa19.6■□□□□ 0.73
SREBF1-223ENST00000584760 ADAMTS2O95450 1211 aa19.6■□□□□ 0.73
SREBF1-223ENST00000584760 NGLY1Q96IV0 654 aa19.6■□□□□ 0.73
SREBF1-223ENST00000584760 RGS12O14924 1447 aa19.59■□□□□ 0.73
SREBF1-223ENST00000584760 ROBO2Q9HCK4 1378 aa19.58■□□□□ 0.73
SREBF1-223ENST00000584760 NHSL1Q5SYE7 1610 aa19.58■□□□□ 0.72
SREBF1-223ENST00000584760 TECPR2O15040 1411 aa19.57■□□□□ 0.72
SREBF1-223ENST00000584760 ORAI2Q96SN7 254 aa19.53■□□□□ 0.72
SREBF1-223ENST00000584760 LRPPRCP42704 1394 aaKnown RBP19.53■□□□□ 0.72
SREBF1-223ENST00000584760 C1orf167Q5SNV9 1468 aa19.53■□□□□ 0.72
SREBF1-223ENST00000584760 USP21Q9UK80 565 aa19.52■□□□□ 0.72
SREBF1-223ENST00000584760 CDC42BPGQ6DT37 1551 aa19.52■□□□□ 0.71
SREBF1-223ENST00000584760 YTHDC2Q9H6S0 1430 aaKnown RBP19.5■□□□□ 0.71
SREBF1-223ENST00000584760 SOS2Q07890 1332 aaPredicted RBP19.5■□□□□ 0.71
SREBF1-223ENST00000584760 ADGRB1O14514 1584 aa19.49■□□□□ 0.71
SREBF1-223ENST00000584760 ABCC11Q96J66 1382 aa19.49■□□□□ 0.71
SREBF1-223ENST00000584760 DHX57Q6P158 1386 aaKnown RBP19.48■□□□□ 0.71
SREBF1-223ENST00000584760 C14orf93Q9H972 538 aaKnown RBP19.48■□□□□ 0.71
SREBF1-223ENST00000584760 TRPC5Q9UL62 973 aaPredicted RBP19.48■□□□□ 0.71
SREBF1-223ENST00000584760 ATAD2Q6PL18 1390 aa19.47■□□□□ 0.71
SREBF1-223ENST00000584760 TMEM132EQ6IEE7 984 aa19.47■□□□□ 0.71
SREBF1-223ENST00000584760 CFAP70Q5T0N1 1121 aa19.45■□□□□ 0.7
SREBF1-223ENST00000584760 FNBP4Q8N3X1 1017 aaPredicted RBP19.45■□□□□ 0.7
SREBF1-223ENST00000584760 DLC1Q96QB1 1528 aa19.45■□□□□ 0.7
SREBF1-223ENST00000584760 STK26Q9P289 416 aa19.44■□□□□ 0.7
SREBF1-223ENST00000584760 FMN2Q9NZ56 1722 aa19.44■□□□□ 0.7
SREBF1-223ENST00000584760 PLEKHH1Q9ULM0 1364 aa19.44■□□□□ 0.7
SREBF1-223ENST00000584760 KIAA1210Q9ULL0 1709 aa19.43■□□□□ 0.7
SREBF1-223ENST00000584760 DCAF11Q8TEB1 546 aa19.42■□□□□ 0.7
SREBF1-223ENST00000584760 ESCO1Q5FWF5 840 aa19.41■□□□□ 0.7
SREBF1-223ENST00000584760 STAC3Q96MF2 364 aa19.41■□□□□ 0.7
SREBF1-223ENST00000584760 ZRANB1Q9UGI0 708 aa19.41■□□□□ 0.7
SREBF1-223ENST00000584760 ARHGEF28Q8N1W1 1705 aaKnown RBP19.4■□□□□ 0.7
SREBF1-223ENST00000584760 WAPLQ7Z5K2 1190 aa19.4■□□□□ 0.7
SREBF1-223ENST00000584760 ATRNO75882 1429 aa19.4■□□□□ 0.7
SREBF1-223ENST00000584760 XPCQ01831 940 aaPredicted RBP19.39■□□□□ 0.69
SREBF1-223ENST00000584760 KDM2AQ9Y2K7 1162 aa19.39■□□□□ 0.69
SREBF1-223ENST00000584760 ADGRB2O60241 1585 aa19.39■□□□□ 0.69
SREBF1-223ENST00000584760 NPHP3Q7Z494 1330 aa19.38■□□□□ 0.69
SREBF1-223ENST00000584760 SIRT1Q96EB6 747 aa19.38■□□□□ 0.69
SREBF1-223ENST00000584760 RGPD8O14715 1765 aaPredicted RBP19.37■□□□□ 0.69
SREBF1-223ENST00000584760 FOXO3O43524 673 aa19.37■□□□□ 0.69
SREBF1-223ENST00000584760 NUTM2FA1L443 756 aa19.36■□□□□ 0.69
SREBF1-223ENST00000584760 TRIM26Q12899 539 aaPredicted RBP19.36■□□□□ 0.69
SREBF1-223ENST00000584760 BCL9LQ86UU0 1499 aa19.35■□□□□ 0.69
SREBF1-223ENST00000584760 KIF1AQ12756 1690 aa19.34■□□□□ 0.69
SREBF1-223ENST00000584760 CCDC125Q86Z20 511 aa19.34■□□□□ 0.69
SREBF1-223ENST00000584760 GJD4Q96KN9 370 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-223ENST00000584760 USP32Q8NFA0 1604 aa19.33■□□□□ 0.68
SREBF1-223ENST00000584760 COL22A1Q8NFW1 1626 aaPredicted RBP19.33■□□□□ 0.68
SREBF1-223ENST00000584760 PRAM1Q96QH2 718 aa19.32■□□□□ 0.68
SREBF1-223ENST00000584760 PXDNQ92626 1479 aa19.31■□□□□ 0.68
SREBF1-223ENST00000584760 TRPM1Q7Z4N2 1603 aa19.29■□□□□ 0.68
SREBF1-223ENST00000584760 TRAK1Q9UPV9 953 aa19.29■□□□□ 0.68
SREBF1-223ENST00000584760 SRCAPQ6ZRS2 3230 aa19.28■□□□□ 0.68
SREBF1-223ENST00000584760 SIN3AQ96ST3 1273 aa19.28■□□□□ 0.68
SREBF1-223ENST00000584760 SAFB2Q14151 953 aaKnown RBP eCLIP19.27■□□□□ 0.68
SREBF1-223ENST00000584760 UNC5CLQ8IV45 518 aa19.27■□□□□ 0.68
SREBF1-223ENST00000584760 POGKQ9P215 609 aa19.26■□□□□ 0.67
SREBF1-223ENST00000584760 L3MBTL2Q969R5 705 aa19.25■□□□□ 0.67
SREBF1-223ENST00000584760 TULP4Q9NRJ4 1543 aa19.25■□□□□ 0.67
SREBF1-223ENST00000584760 ANKARQ7Z5J8 1434 aa19.25■□□□□ 0.67
SREBF1-223ENST00000584760 SPATA31A3Q5VYP0 1347 aa19.25■□□□□ 0.67
SREBF1-223ENST00000584760 PLEKHG5O94827 1062 aa19.24■□□□□ 0.67
SREBF1-223ENST00000584760 KRT28Q7Z3Y7 464 aa19.24■□□□□ 0.67
SREBF1-223ENST00000584760 RALGAPBQ86X10 1494 aa19.23■□□□□ 0.67
SREBF1-223ENST00000584760 ITSN1Q15811 1721 aa19.23■□□□□ 0.67
SREBF1-223ENST00000584760 QRICH2Q9H0J4 1663 aa19.22■□□□□ 0.67
SREBF1-223ENST00000584760 HAP1P54257 671 aaPredicted RBP19.22■□□□□ 0.67
SREBF1-223ENST00000584760 DEFB132Q7Z7B7 95 aa19.22■□□□□ 0.67
SREBF1-223ENST00000584760 BLMP54132 1417 aaPredicted RBP19.22■□□□□ 0.67
SREBF1-223ENST00000584760 NEUROD1Q13562 356 aa19.21■□□□□ 0.67
SREBF1-223ENST00000584760 NBPF1Q3BBV0 1214 aa19.21■□□□□ 0.67
SREBF1-223ENST00000584760 SEPT12Q8IYM1 358 aa19.21■□□□□ 0.67
SREBF1-223ENST00000584760 MARF1Q9Y4F3 1742 aaKnown RBP19.21■□□□□ 0.67
SREBF1-223ENST00000584760 MINK1Q8N4C8 1332 aaPredicted RBP19.21■□□□□ 0.67
SREBF1-223ENST00000584760 SLIT2O94813 1529 aa19.2■□□□□ 0.66
SREBF1-223ENST00000584760 SF3B2Q13435 895 aaKnown RBP19.2■□□□□ 0.66
SREBF1-223ENST00000584760 CABLES1Q8TDN4 633 aa19.2■□□□□ 0.66
SREBF1-223ENST00000584760 HIRIP3Q9BW71 556 aaPredicted RBP19.2■□□□□ 0.66
SREBF1-223ENST00000584760 CCDC9Q9Y3X0 531 aaKnown RBP19.2■□□□□ 0.66
SREBF1-223ENST00000584760 TOPAZ1Q8N9V7 1692 aa19.2■□□□□ 0.66
SREBF1-223ENST00000584760 EIF3AQ14152 1382 aaKnown RBP19.19■□□□□ 0.66
SREBF1-223ENST00000584760 GLI3P10071 1580 aa19.19■□□□□ 0.66
SREBF1-223ENST00000584760 TRPM3Q9HCF6 1732 aaPredicted RBP19.19■□□□□ 0.66
SREBF1-223ENST00000584760 ATP7BP35670 1465 aa19.18■□□□□ 0.66
SREBF1-223ENST00000584760 EP400Q96L91 3159 aa19.18■□□□□ 0.66
SREBF1-223ENST00000584760 PSME1Q06323 249 aa19.17■□□□□ 0.66
SREBF1-223ENST00000584760 LMOD2Q6P5Q4 547 aa19.17■□□□□ 0.66
SREBF1-223ENST00000584760 PHF8Q9UPP1 1060 aa19.17■□□□□ 0.66
SREBF1-223ENST00000584760 PRR36Q9H6K5 1346 aa19.17■□□□□ 0.66
SREBF1-223ENST00000584760 ABCA3Q99758 1704 aa19.17■□□□□ 0.66
SREBF1-223ENST00000584760 WASLO00401 505 aaPredicted RBP19.16■□□□□ 0.66
SREBF1-223ENST00000584760 VPS72Q15906 364 aa19.16■□□□□ 0.66
SREBF1-223ENST00000584760 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.15■□□□□ 0.66
SREBF1-223ENST00000584760 KRT27Q7Z3Y8 459 aa19.14■□□□□ 0.65
SREBF1-223ENST00000584760 ALS2Q96Q42 1657 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms