RNA–Protein interactions for RNA: ENST00000584746.5

CUEDC1-212, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 2,870 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-212ENST00000584746 MAP3K4Q9Y6R4 1608 aa23.26■■□□□ 1.31
CUEDC1-212ENST00000584746 NFKBIBQ15653 356 aa23.26■■□□□ 1.31
CUEDC1-212ENST00000584746 MROH1Q8NDA8 1641 aa23.26■■□□□ 1.31
CUEDC1-212ENST00000584746 IDI1Q13907 227 aa23.26■■□□□ 1.31
CUEDC1-212ENST00000584746 FBXO31Q5XUX0 539 aaPredicted RBP23.26■■□□□ 1.31
CUEDC1-212ENST00000584746 SLKQ9H2G2 1235 aaPredicted RBP23.26■■□□□ 1.31
CUEDC1-212ENST00000584746 RARSP54136 660 aaKnown RBP23.25■■□□□ 1.31
CUEDC1-212ENST00000584746 RUNDC1Q96C34 613 aa23.25■■□□□ 1.31
CUEDC1-212ENST00000584746 ARXQ96QS3 562 aa23.25■■□□□ 1.31
CUEDC1-212ENST00000584746 FRAT2O75474 233 aaPredicted RBP23.24■■□□□ 1.31
CUEDC1-212ENST00000584746 MLECQ14165 292 aa23.24■■□□□ 1.31
CUEDC1-212ENST00000584746 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.24■■□□□ 1.31
CUEDC1-212ENST00000584746 INO80Q9ULG1 1556 aaPredicted RBP23.23■■□□□ 1.31
CUEDC1-212ENST00000584746 CD109Q6YHK3 1445 aa23.22■■□□□ 1.31
CUEDC1-212ENST00000584746 KIF1BO60333 1816 aa23.22■■□□□ 1.31
CUEDC1-212ENST00000584746 CGNL1Q0VF96 1302 aa23.21■■□□□ 1.31
CUEDC1-212ENST00000584746 KIDINS220Q9ULH0 1771 aa23.21■■□□□ 1.31
CUEDC1-212ENST00000584746 DEPDC5O75140 1603 aa23.21■■□□□ 1.31
CUEDC1-212ENST00000584746 DDRGK1Q96HY6 314 aa23.2■■□□□ 1.3
CUEDC1-212ENST00000584746 INSRP06213 1382 aa23.2■■□□□ 1.3
CUEDC1-212ENST00000584746 PRAM1Q96QH2 718 aa23.19■■□□□ 1.3
CUEDC1-212ENST00000584746 EFCAB6Q5THR3 1501 aa23.19■■□□□ 1.3
CUEDC1-212ENST00000584746 POGKQ9P215 609 aa23.19■■□□□ 1.3
CUEDC1-212ENST00000584746 ABCA9Q8IUA7 1624 aa23.18■■□□□ 1.3
CUEDC1-212ENST00000584746 STAC3Q96MF2 364 aa23.18■■□□□ 1.3
CUEDC1-212ENST00000584746 CFAP53Q96M91 514 aa23.17■■□□□ 1.3
CUEDC1-212ENST00000584746 BRPF3Q9ULD4 1205 aa23.17■■□□□ 1.3
CUEDC1-212ENST00000584746 EXOSC9Q06265 439 aaKnown RBP23.16■■□□□ 1.3
CUEDC1-212ENST00000584746 STAG3Q9UJ98 1225 aa23.16■■□□□ 1.3
CUEDC1-212ENST00000584746 ELL2O00472 640 aaPredicted RBP23.16■■□□□ 1.3
CUEDC1-212ENST00000584746 THUMPD2Q9BTF0 503 aaKnown RBP23.15■■□□□ 1.3
CUEDC1-212ENST00000584746 EVC2Q86UK5 1308 aa23.15■■□□□ 1.3
CUEDC1-212ENST00000584746 ZNF518AQ6AHZ1 1483 aa23.15■■□□□ 1.3
CUEDC1-212ENST00000584746 FTSJ3Q8IY81 847 aaKnown RBP23.15■■□□□ 1.3
CUEDC1-212ENST00000584746 NPC1L1Q9UHC9 1359 aa23.15■■□□□ 1.3
CUEDC1-212ENST00000584746 VWDEQ8N2E2 1590 aa23.15■■□□□ 1.3
CUEDC1-212ENST00000584746 POLR3AO14802 1390 aaPredicted RBP23.14■■□□□ 1.29
CUEDC1-212ENST00000584746 WAPLQ7Z5K2 1190 aa23.14■■□□□ 1.29
CUEDC1-212ENST00000584746 SMC4Q9NTJ3 1288 aa23.14■■□□□ 1.29
CUEDC1-212ENST00000584746 PDZRN3Q9UPQ7 1066 aa23.14■■□□□ 1.29
CUEDC1-212ENST00000584746 OSCARQ8IYS5 282 aa23.13■■□□□ 1.29
CUEDC1-212ENST00000584746 CYB5RLQ6IPT4 315 aa23.13■■□□□ 1.29
CUEDC1-212ENST00000584746 MYOM2P54296 1465 aa23.12■■□□□ 1.29
CUEDC1-212ENST00000584746 HMOX1P09601 288 aa23.12■■□□□ 1.29
CUEDC1-212ENST00000584746 ITPRIPQ8IWB1 547 aa23.12■■□□□ 1.29
CUEDC1-212ENST00000584746 PLPPR3Q6T4P5 718 aa23.11■■□□□ 1.29
CUEDC1-212ENST00000584746 CABP1Q9NZU7 370 aa23.11■■□□□ 1.29
CUEDC1-212ENST00000584746 VGFO15240 615 aaPredicted RBP23.11■■□□□ 1.29
CUEDC1-212ENST00000584746 PDE3AQ14432 1141 aa23.1■■□□□ 1.29
CUEDC1-212ENST00000584746 USP19O94966 1318 aa23.1■■□□□ 1.29
CUEDC1-212ENST00000584746 NCKAP5LQ9HCH0 1330 aa23.1■■□□□ 1.29
CUEDC1-212ENST00000584746 A0A1W2PP64 1363 aa23.1■■□□□ 1.29
CUEDC1-212ENST00000584746 NUTM2FA1L443 756 aa23.09■■□□□ 1.29
CUEDC1-212ENST00000584746 QRICH2Q9H0J4 1663 aa23.09■■□□□ 1.29
CUEDC1-212ENST00000584746 RIPK4P57078 832 aa23.07■■□□□ 1.28
CUEDC1-212ENST00000584746 SSH1Q8WYL5 1049 aa23.07■■□□□ 1.28
CUEDC1-212ENST00000584746 ZRANB1Q9UGI0 708 aa23.07■■□□□ 1.28
CUEDC1-212ENST00000584746 FYB1O15117 783 aa23.07■■□□□ 1.28
CUEDC1-212ENST00000584746 MAPK8IP3Q9UPT6 1336 aa23.06■■□□□ 1.28
CUEDC1-212ENST00000584746 FRMPD1Q5SYB0 1578 aa23.06■■□□□ 1.28
CUEDC1-212ENST00000584746 YEATS2Q9ULM3 1422 aa23.05■■□□□ 1.28
CUEDC1-212ENST00000584746 C1orf115Q9H7X2 142 aa23.05■■□□□ 1.28
CUEDC1-212ENST00000584746 NOB1Q9ULX3 412 aaKnown RBP23.05■■□□□ 1.28
CUEDC1-212ENST00000584746 ADGRB3O60242 1522 aa23.05■■□□□ 1.28
CUEDC1-212ENST00000584746 POGZQ7Z3K3 1410 aa23.05■■□□□ 1.28
CUEDC1-212ENST00000584746 SOX12O15370 315 aa23.04■■□□□ 1.28
CUEDC1-212ENST00000584746 TRIM27P14373 513 aa23.04■■□□□ 1.28
CUEDC1-212ENST00000584746 TMPOP42166 694 aaKnown RBP23.04■■□□□ 1.28
CUEDC1-212ENST00000584746 ADGRB1O14514 1584 aa23.04■■□□□ 1.28
CUEDC1-212ENST00000584746 MFAP1P55081 439 aaKnown RBP23.03■■□□□ 1.28
CUEDC1-212ENST00000584746 GSE1Q14687 1217 aa23.03■■□□□ 1.28
CUEDC1-212ENST00000584746 TRIM35Q9UPQ4 493 aa23.03■■□□□ 1.28
CUEDC1-212ENST00000584746 ARAP3Q8WWN8 1544 aa23.03■■□□□ 1.28
CUEDC1-212ENST00000584746 SHPRHQ149N8 1683 aa23.03■■□□□ 1.28
CUEDC1-212ENST00000584746 CDK19Q9BWU1 502 aa23.03■■□□□ 1.28
CUEDC1-212ENST00000584746 DZIP1LQ8IYY4 767 aaKnown RBP23.02■■□□□ 1.28
CUEDC1-212ENST00000584746 MYH16Q9H6N6 1097 aa23.02■■□□□ 1.28
CUEDC1-212ENST00000584746 TULP4Q9NRJ4 1543 aa23.02■■□□□ 1.28
CUEDC1-212ENST00000584746 SLC24A1O60721 1099 aa23.02■■□□□ 1.28
CUEDC1-212ENST00000584746 ZKSCAN2Q63HK3 967 aa23.01■■□□□ 1.27
CUEDC1-212ENST00000584746 NRXN1Q9ULB1 1477 aa23■■□□□ 1.27
CUEDC1-212ENST00000584746 SIGLEC1Q9BZZ2 1709 aa23■■□□□ 1.27
CUEDC1-212ENST00000584746 WDR63Q8IWG1 891 aa23■■□□□ 1.27
CUEDC1-212ENST00000584746 IFT172Q9UG01 1749 aa23■■□□□ 1.27
CUEDC1-212ENST00000584746 MVPQ14764 893 aaKnown RBP22.99■■□□□ 1.27
CUEDC1-212ENST00000584746 KIAA1210Q9ULL0 1709 aa22.99■■□□□ 1.27
CUEDC1-212ENST00000584746 TMEM57Q8N5G2 664 aa22.99■■□□□ 1.27
CUEDC1-212ENST00000584746 ANKRD36BQ8N2N9 1353 aa22.99■■□□□ 1.27
CUEDC1-212ENST00000584746 PHACTR3Q96KR7 559 aa22.98■■□□□ 1.27
CUEDC1-212ENST00000584746 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.98■■□□□ 1.27
CUEDC1-212ENST00000584746 ABCC3O15438 1527 aa22.98■■□□□ 1.27
CUEDC1-212ENST00000584746 GLI2P10070 1586 aa22.98■■□□□ 1.27
CUEDC1-212ENST00000584746 SBNO2Q9Y2G9 1366 aa22.98■■□□□ 1.27
CUEDC1-212ENST00000584746 PRKAR2BP31323 418 aa22.97■■□□□ 1.27
CUEDC1-212ENST00000584746 EMILIN1Q9Y6C2 1016 aa22.97■■□□□ 1.27
CUEDC1-212ENST00000584746 PHF23Q9BUL5 403 aaPredicted RBP22.97■■□□□ 1.27
CUEDC1-212ENST00000584746 PLEKHF1Q96S99 279 aa22.96■■□□□ 1.27
CUEDC1-212ENST00000584746 USP35Q9P2H5 1018 aa22.96■■□□□ 1.27
CUEDC1-212ENST00000584746 PPLO60437 1756 aa22.96■■□□□ 1.27
CUEDC1-212ENST00000584746 DCTN1Q14203 1278 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms