RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 CDC42BPBQ9Y5S2 1711 aa14.42□□□□□ -0.1
TOP3A-217ENST00000584582 ATP10AO60312 1499 aa14.41□□□□□ -0.1
TOP3A-217ENST00000584582 NECTIN2Q92692 538 aa14.41□□□□□ -0.1
TOP3A-217ENST00000584582 COG3Q96JB2 828 aa14.41□□□□□ -0.1
TOP3A-217ENST00000584582 PREX2Q70Z35 1606 aa14.41□□□□□ -0.1
TOP3A-217ENST00000584582 DDRGK1Q96HY6 314 aa14.41□□□□□ -0.1
TOP3A-217ENST00000584582 HDGFP51858 240 aaKnown RBP14.4□□□□□ -0.1
TOP3A-217ENST00000584582 GPRASP1Q5JY77 1395 aa14.4□□□□□ -0.1
TOP3A-217ENST00000584582 ATP7AQ04656 1500 aa14.4□□□□□ -0.1
TOP3A-217ENST00000584582 MFAP1P55081 439 aaKnown RBP14.4□□□□□ -0.1
TOP3A-217ENST00000584582 NME9Q86XW9 330 aa14.4□□□□□ -0.1
TOP3A-217ENST00000584582 EMILIN1Q9Y6C2 1016 aa14.4□□□□□ -0.1
TOP3A-217ENST00000584582 DCTN1Q14203 1278 aa14.39□□□□□ -0.11
TOP3A-217ENST00000584582 MYO5CQ9NQX4 1742 aa14.39□□□□□ -0.11
TOP3A-217ENST00000584582 ZKSCAN2Q63HK3 967 aa14.39□□□□□ -0.11
TOP3A-217ENST00000584582 BACH2Q9BYV9 841 aa14.39□□□□□ -0.11
TOP3A-217ENST00000584582 C1orf115Q9H7X2 142 aa14.39□□□□□ -0.11
TOP3A-217ENST00000584582 ZCCHC11Q5TAX3 1644 aaKnown RBP14.39□□□□□ -0.11
TOP3A-217ENST00000584582 MAST1Q9Y2H9 1570 aa14.38□□□□□ -0.11
TOP3A-217ENST00000584582 ZNF518AQ6AHZ1 1483 aa14.38□□□□□ -0.11
TOP3A-217ENST00000584582 FAM161AQ3B820 660 aa14.38□□□□□ -0.11
TOP3A-217ENST00000584582 SLC4A10Q6U841 1118 aa14.38□□□□□ -0.11
TOP3A-217ENST00000584582 RWDD1Q9H446 243 aaPredicted RBP14.38□□□□□ -0.11
TOP3A-217ENST00000584582 KDM5DQ9BY66 1539 aa14.38□□□□□ -0.11
TOP3A-217ENST00000584582 DZIP1LQ8IYY4 767 aaKnown RBP14.37□□□□□ -0.11
TOP3A-217ENST00000584582 ADCY10Q96PN6 1610 aa14.37□□□□□ -0.11
TOP3A-217ENST00000584582 EID1Q9Y6B2 187 aa14.36□□□□□ -0.11
TOP3A-217ENST00000584582 RTEL1-TNFRSF6BF6WH68 1400 aa14.36□□□□□ -0.11
TOP3A-217ENST00000584582 IGHDP01880 384 aa14.36□□□□□ -0.11
TOP3A-217ENST00000584582 FYB1O15117 783 aa14.36□□□□□ -0.11
TOP3A-217ENST00000584582 AMPHP49418 695 aa14.36□□□□□ -0.11
TOP3A-217ENST00000584582 RPGRIP1LQ68CZ1 1315 aa14.36□□□□□ -0.11
TOP3A-217ENST00000584582 NPATQ14207 1427 aa14.35□□□□□ -0.11
TOP3A-217ENST00000584582 PNNQ9H307 717 aaKnown RBP14.35□□□□□ -0.11
TOP3A-217ENST00000584582 TMPOP42166 694 aaKnown RBP14.35□□□□□ -0.11
TOP3A-217ENST00000584582 YEATS2Q9ULM3 1422 aa14.35□□□□□ -0.11
TOP3A-217ENST00000584582 ABCC1P33527 1531 aa14.35□□□□□ -0.11
TOP3A-217ENST00000584582 LNPKQ9C0E8 428 aa14.35□□□□□ -0.11
TOP3A-217ENST00000584582 RARSP54136 660 aaKnown RBP14.34□□□□□ -0.11
TOP3A-217ENST00000584582 ZNF428Q96B54 188 aa14.34□□□□□ -0.11
TOP3A-217ENST00000584582 NOB1Q9ULX3 412 aaKnown RBP14.34□□□□□ -0.11
TOP3A-217ENST00000584582 IPO8O15397 1037 aaKnown RBP14.33□□□□□ -0.12
TOP3A-217ENST00000584582 ASXL1Q8IXJ9 1541 aa14.33□□□□□ -0.12
TOP3A-217ENST00000584582 FOXD4L1Q9NU39 408 aa14.33□□□□□ -0.12
TOP3A-217ENST00000584582 RTF1Q92541 710 aaKnown RBP14.33□□□□□ -0.12
TOP3A-217ENST00000584582 RLBP1P12271 317 aa14.33□□□□□ -0.12
TOP3A-217ENST00000584582 NUDT16Q96DE0 195 aaKnown RBP14.33□□□□□ -0.12
TOP3A-217ENST00000584582 MIS18AQ9NYP9 233 aa14.32□□□□□ -0.12
TOP3A-217ENST00000584582 MS4A1P11836 297 aa14.32□□□□□ -0.12
TOP3A-217ENST00000584582 FAM83GA6ND36 823 aa14.31□□□□□ -0.12
TOP3A-217ENST00000584582 BECN1Q14457 450 aa14.31□□□□□ -0.12
TOP3A-217ENST00000584582 TPRNQ4KMQ1 711 aa14.31□□□□□ -0.12
TOP3A-217ENST00000584582 ANKRD45Q5TZF3 282 aa14.31□□□□□ -0.12
TOP3A-217ENST00000584582 SULT6B1Q6IMI4 303 aa14.31□□□□□ -0.12
TOP3A-217ENST00000584582 SSH1Q8WYL5 1049 aa14.31□□□□□ -0.12
TOP3A-217ENST00000584582 CROCC2H7BZ55 1655 aa14.31□□□□□ -0.12
TOP3A-217ENST00000584582 PDZRN3Q9UPQ7 1066 aa14.31□□□□□ -0.12
TOP3A-217ENST00000584582 RNF123Q5XPI4 1314 aa14.3□□□□□ -0.12
TOP3A-217ENST00000584582 XPCQ01831 940 aaPredicted RBP14.28□□□□□ -0.12
TOP3A-217ENST00000584582 GZF1Q9H116 711 aaPredicted RBP14.28□□□□□ -0.12
TOP3A-217ENST00000584582 PRDM15P57071 1507 aaPredicted RBP14.28□□□□□ -0.12
TOP3A-217ENST00000584582 A0A0G2JS52 829 aa14.28□□□□□ -0.12
TOP3A-217ENST00000584582 NLRP6P59044 892 aa14.28□□□□□ -0.12
TOP3A-217ENST00000584582 PCDHB15Q9Y5E8 787 aa14.28□□□□□ -0.12
TOP3A-217ENST00000584582 A0A1W2PP64 1363 aa14.27□□□□□ -0.12
TOP3A-217ENST00000584582 PDE3AQ14432 1141 aa14.27□□□□□ -0.13
TOP3A-217ENST00000584582 CCDC61Q9Y6R9 512 aa14.27□□□□□ -0.13
TOP3A-217ENST00000584582 ZFYVE16Q7Z3T8 1539 aa14.27□□□□□ -0.13
TOP3A-217ENST00000584582 UHRF1BP1LA0JNW5 1464 aa14.27□□□□□ -0.13
TOP3A-217ENST00000584582 NKTRP30414 1462 aaKnown RBP14.27□□□□□ -0.13
TOP3A-217ENST00000584582 MCM10Q7L590 875 aa14.26□□□□□ -0.13
TOP3A-217ENST00000584582 TMEM57Q8N5G2 664 aa14.26□□□□□ -0.13
TOP3A-217ENST00000584582 WDR63Q8IWG1 891 aa14.26□□□□□ -0.13
TOP3A-217ENST00000584582 PHACTR3Q96KR7 559 aa14.26□□□□□ -0.13
TOP3A-217ENST00000584582 POGZQ7Z3K3 1410 aa14.25□□□□□ -0.13
TOP3A-217ENST00000584582 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.25□□□□□ -0.13
TOP3A-217ENST00000584582 EIF2AK4Q9P2K8 1649 aaKnown RBP14.25□□□□□ -0.13
TOP3A-217ENST00000584582 WASLO00401 505 aaPredicted RBP14.25□□□□□ -0.13
TOP3A-217ENST00000584582 ATAD2Q6PL18 1390 aa14.25□□□□□ -0.13
TOP3A-217ENST00000584582 ERVK-7P63135 1459 aa14.24□□□□□ -0.13
TOP3A-217ENST00000584582 PTPRTO14522 1441 aa14.24□□□□□ -0.13
TOP3A-217ENST00000584582 TRIM27P14373 513 aa14.24□□□□□ -0.13
TOP3A-217ENST00000584582 AEBP1Q8IUX7 1158 aa14.24□□□□□ -0.13
TOP3A-217ENST00000584582 DDX19BQ9UMR2 479 aa14.24□□□□□ -0.13
TOP3A-217ENST00000584582 ATF7IPQ6VMQ6 1270 aa14.23□□□□□ -0.13
TOP3A-217ENST00000584582 MVPQ14764 893 aaKnown RBP14.23□□□□□ -0.13
TOP3A-217ENST00000584582 KRT24Q2M2I5 525 aa14.23□□□□□ -0.13
TOP3A-217ENST00000584582 TWISTNBQ3B726 338 aaPredicted RBP14.23□□□□□ -0.13
TOP3A-217ENST00000584582 NGEFQ8N5V2 710 aa14.23□□□□□ -0.13
TOP3A-217ENST00000584582 POLKQ9UBT6 870 aa14.23□□□□□ -0.13
TOP3A-217ENST00000584582 EIF2S2P20042 333 aaKnown RBP14.22□□□□□ -0.13
TOP3A-217ENST00000584582 CLTCL1P53675 1640 aa14.22□□□□□ -0.13
TOP3A-217ENST00000584582 TRPM1Q7Z4N2 1603 aa14.22□□□□□ -0.13
TOP3A-217ENST00000584582 ANKRD36BQ8N2N9 1353 aa14.22□□□□□ -0.13
TOP3A-217ENST00000584582 CALD1Q05682 793 aaKnown RBP14.22□□□□□ -0.13
TOP3A-217ENST00000584582 HSP90AB2PQ58FF8 381 aa14.21□□□□□ -0.13
TOP3A-217ENST00000584582 TSPYL6Q8N831 410 aa14.21□□□□□ -0.14
TOP3A-217ENST00000584582 ABTB2Q8N961 1025 aa14.21□□□□□ -0.14
TOP3A-217ENST00000584582 SEC24BO95487 1268 aa14.2□□□□□ -0.14
TOP3A-217ENST00000584582 USHBP1Q8N6Y0 703 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms