RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 YTHDC2Q9H6S0 1430 aaKnown RBP19.95■□□□□ 0.78
CDK5RAP3-233ENST00000584186 LRRC59Q96AG4 307 aaKnown RBP19.95■□□□□ 0.78
CDK5RAP3-233ENST00000584186 PLEKHH1Q9ULM0 1364 aa19.95■□□□□ 0.78
CDK5RAP3-233ENST00000584186 NHSL1Q5SYE7 1610 aa19.94■□□□□ 0.78
CDK5RAP3-233ENST00000584186 NRXN1Q9ULB1 1477 aa19.94■□□□□ 0.78
CDK5RAP3-233ENST00000584186 NUTM2FA1L443 756 aa19.94■□□□□ 0.78
CDK5RAP3-233ENST00000584186 POTEAQ6S8J7 498 aa19.94■□□□□ 0.78
CDK5RAP3-233ENST00000584186 DCAF11Q8TEB1 546 aa19.94■□□□□ 0.78
CDK5RAP3-233ENST00000584186 LRP6O75581 1613 aa19.94■□□□□ 0.78
CDK5RAP3-233ENST00000584186 SHPRHQ149N8 1683 aa19.94■□□□□ 0.78
CDK5RAP3-233ENST00000584186 ESCO1Q5FWF5 840 aa19.92■□□□□ 0.78
CDK5RAP3-233ENST00000584186 DHX57Q6P158 1386 aaKnown RBP19.92■□□□□ 0.78
CDK5RAP3-233ENST00000584186 CDC42BPGQ6DT37 1551 aa19.91■□□□□ 0.78
CDK5RAP3-233ENST00000584186 KNDC1Q76NI1 1749 aa19.9■□□□□ 0.78
CDK5RAP3-233ENST00000584186 LAMC1P11047 1609 aa19.9■□□□□ 0.78
CDK5RAP3-233ENST00000584186 SAFB2Q14151 953 aaKnown RBP eCLIP19.89■□□□□ 0.77
CDK5RAP3-233ENST00000584186 PRAM1Q96QH2 718 aa19.88■□□□□ 0.77
CDK5RAP3-233ENST00000584186 PNPLA6Q8IY17 1366 aa19.87■□□□□ 0.77
CDK5RAP3-233ENST00000584186 SIRT1Q96EB6 747 aa19.87■□□□□ 0.77
CDK5RAP3-233ENST00000584186 SOS2Q07890 1332 aaPredicted RBP19.86■□□□□ 0.77
CDK5RAP3-233ENST00000584186 POGKQ9P215 609 aa19.86■□□□□ 0.77
CDK5RAP3-233ENST00000584186 FOXO3O43524 673 aa19.85■□□□□ 0.77
CDK5RAP3-233ENST00000584186 XPCQ01831 940 aaPredicted RBP19.85■□□□□ 0.77
CDK5RAP3-233ENST00000584186 NPHP3Q7Z494 1330 aa19.84■□□□□ 0.77
CDK5RAP3-233ENST00000584186 ZNF772Q68DY9 489 aaPredicted RBP19.84■□□□□ 0.77
CDK5RAP3-233ENST00000584186 TRAK1Q9UPV9 953 aa19.84■□□□□ 0.77
CDK5RAP3-233ENST00000584186 ADAMTS2O95450 1211 aa19.82■□□□□ 0.76
CDK5RAP3-233ENST00000584186 STAC3Q96MF2 364 aa19.82■□□□□ 0.76
CDK5RAP3-233ENST00000584186 C8orf37Q96NL8 207 aa19.82■□□□□ 0.76
CDK5RAP3-233ENST00000584186 ADGRB1O14514 1584 aa19.81■□□□□ 0.76
CDK5RAP3-233ENST00000584186 AFF2P51816 1311 aa19.8■□□□□ 0.76
CDK5RAP3-233ENST00000584186 FMN2Q9NZ56 1722 aa19.8■□□□□ 0.76
CDK5RAP3-233ENST00000584186 DLC1Q96QB1 1528 aa19.78■□□□□ 0.76
CDK5RAP3-233ENST00000584186 HIRIP3Q9BW71 556 aaPredicted RBP19.78■□□□□ 0.76
CDK5RAP3-233ENST00000584186 NGLY1Q96IV0 654 aa19.77■□□□□ 0.76
CDK5RAP3-233ENST00000584186 PXDNQ92626 1479 aa19.77■□□□□ 0.76
CDK5RAP3-233ENST00000584186 MINK1Q8N4C8 1332 aaPredicted RBP19.76■□□□□ 0.75
CDK5RAP3-233ENST00000584186 PHF8Q9UPP1 1060 aa19.75■□□□□ 0.75
CDK5RAP3-233ENST00000584186 RXRBP28702 533 aa19.74■□□□□ 0.75
CDK5RAP3-233ENST00000584186 KRT28Q7Z3Y7 464 aa19.74■□□□□ 0.75
CDK5RAP3-233ENST00000584186 KIF1AQ12756 1690 aa19.73■□□□□ 0.75
CDK5RAP3-233ENST00000584186 RGPD8O14715 1765 aaPredicted RBP19.72■□□□□ 0.75
CDK5RAP3-233ENST00000584186 PMFBP1Q8TBY8 1022 aa19.72■□□□□ 0.75
CDK5RAP3-233ENST00000584186 PLEKHG5O94827 1062 aa19.71■□□□□ 0.75
CDK5RAP3-233ENST00000584186 QTRT2Q9H974 415 aaKnown RBP19.71■□□□□ 0.75
CDK5RAP3-233ENST00000584186 COL22A1Q8NFW1 1626 aaPredicted RBP19.7■□□□□ 0.74
CDK5RAP3-233ENST00000584186 PSME1Q06323 249 aa19.7■□□□□ 0.74
CDK5RAP3-233ENST00000584186 SPATA31A3Q5VYP0 1347 aa19.7■□□□□ 0.74
CDK5RAP3-233ENST00000584186 NEUROD1Q13562 356 aa19.69■□□□□ 0.74
CDK5RAP3-233ENST00000584186 SIN3AQ96ST3 1273 aa19.69■□□□□ 0.74
CDK5RAP3-233ENST00000584186 ADGRB2O60241 1585 aa19.69■□□□□ 0.74
CDK5RAP3-233ENST00000584186 ANKARQ7Z5J8 1434 aa19.68■□□□□ 0.74
CDK5RAP3-233ENST00000584186 WASLO00401 505 aaPredicted RBP19.68■□□□□ 0.74
CDK5RAP3-233ENST00000584186 LMOD2Q6P5Q4 547 aa19.68■□□□□ 0.74
CDK5RAP3-233ENST00000584186 USP21Q9UK80 565 aa19.68■□□□□ 0.74
CDK5RAP3-233ENST00000584186 NBPF1Q3BBV0 1214 aa19.67■□□□□ 0.74
CDK5RAP3-233ENST00000584186 EIF3AQ14152 1382 aaKnown RBP19.67■□□□□ 0.74
CDK5RAP3-233ENST00000584186 USP32Q8NFA0 1604 aa19.66■□□□□ 0.74
CDK5RAP3-233ENST00000584186 HAP1P54257 671 aaPredicted RBP19.66■□□□□ 0.74
CDK5RAP3-233ENST00000584186 L3MBTL2Q969R5 705 aa19.66■□□□□ 0.74
CDK5RAP3-233ENST00000584186 ARHGEF28Q8N1W1 1705 aaKnown RBP19.65■□□□□ 0.74
CDK5RAP3-233ENST00000584186 RBM6P78332 1123 aaKnown RBP19.65■□□□□ 0.74
CDK5RAP3-233ENST00000584186 PRR36Q9H6K5 1346 aa19.65■□□□□ 0.74
CDK5RAP3-233ENST00000584186 TNS3Q68CZ2 1445 aa19.64■□□□□ 0.73
CDK5RAP3-233ENST00000584186 KIAA1210Q9ULL0 1709 aa19.63■□□□□ 0.73
CDK5RAP3-233ENST00000584186 TULP4Q9NRJ4 1543 aa19.63■□□□□ 0.73
CDK5RAP3-233ENST00000584186 FNBP4Q8N3X1 1017 aaPredicted RBP19.63■□□□□ 0.73
CDK5RAP3-233ENST00000584186 CABLES1Q8TDN4 633 aa19.63■□□□□ 0.73
CDK5RAP3-233ENST00000584186 TRPC5Q9UL62 973 aaPredicted RBP19.62■□□□□ 0.73
CDK5RAP3-233ENST00000584186 SBNO1A3KN83 1393 aa19.61■□□□□ 0.73
CDK5RAP3-233ENST00000584186 GPRASP1Q5JY77 1395 aa19.61■□□□□ 0.73
CDK5RAP3-233ENST00000584186 NGDNQ8NEJ9 315 aaKnown RBP19.61■□□□□ 0.73
CDK5RAP3-233ENST00000584186 CDK19Q9BWU1 502 aa19.61■□□□□ 0.73
CDK5RAP3-233ENST00000584186 CDK12Q9NYV4 1490 aaPredicted RBP19.6■□□□□ 0.73
CDK5RAP3-233ENST00000584186 NUDT16Q96DE0 195 aaKnown RBP19.6■□□□□ 0.73
CDK5RAP3-233ENST00000584186 ARHGEF10O15013 1369 aa19.59■□□□□ 0.73
CDK5RAP3-233ENST00000584186 RGS12O14924 1447 aa19.59■□□□□ 0.73
CDK5RAP3-233ENST00000584186 PAK3O75914 559 aaPredicted RBP19.58■□□□□ 0.72
CDK5RAP3-233ENST00000584186 MARF1Q9Y4F3 1742 aaKnown RBP19.58■□□□□ 0.72
CDK5RAP3-233ENST00000584186 TRIM26Q12899 539 aaPredicted RBP19.57■□□□□ 0.72
CDK5RAP3-233ENST00000584186 CENPJQ9HC77 1338 aaPredicted RBP19.56■□□□□ 0.72
CDK5RAP3-233ENST00000584186 ATP7BP35670 1465 aa19.56■□□□□ 0.72
CDK5RAP3-233ENST00000584186 BCL9LQ86UU0 1499 aa19.56■□□□□ 0.72
CDK5RAP3-233ENST00000584186 ATRNO75882 1429 aa19.56■□□□□ 0.72
CDK5RAP3-233ENST00000584186 UPF1Q92900 1129 aaKnown RBP eCLIP19.55■□□□□ 0.72
CDK5RAP3-233ENST00000584186 SRPK2P78362 688 aaKnown RBP19.54■□□□□ 0.72
CDK5RAP3-233ENST00000584186 UNC5CLQ8IV45 518 aa19.53■□□□□ 0.72
CDK5RAP3-233ENST00000584186 ITSN1Q15811 1721 aa19.53■□□□□ 0.72
CDK5RAP3-233ENST00000584186 TRPM3Q9HCF6 1732 aaPredicted RBP19.53■□□□□ 0.72
CDK5RAP3-233ENST00000584186 CCDC61Q9Y6R9 512 aa19.52■□□□□ 0.72
CDK5RAP3-233ENST00000584186 ROCK2O75116 1388 aaKnown RBP19.52■□□□□ 0.72
CDK5RAP3-233ENST00000584186 GJD4Q96KN9 370 aaPredicted RBP19.51■□□□□ 0.71
CDK5RAP3-233ENST00000584186 CABP2Q9NPB3 220 aa19.51■□□□□ 0.71
CDK5RAP3-233ENST00000584186 SLIT2O94813 1529 aa19.51■□□□□ 0.71
CDK5RAP3-233ENST00000584186 ACEP12821 1306 aa19.5■□□□□ 0.71
CDK5RAP3-233ENST00000584186 ABCA3Q99758 1704 aa19.49■□□□□ 0.71
CDK5RAP3-233ENST00000584186 FAM83GA6ND36 823 aa19.49■□□□□ 0.71
CDK5RAP3-233ENST00000584186 TRPM1Q7Z4N2 1603 aa19.49■□□□□ 0.71
CDK5RAP3-233ENST00000584186 ALS2Q96Q42 1657 aa19.49■□□□□ 0.71
CDK5RAP3-233ENST00000584186 NBPF8Q3BBV2 869 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms