RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 LRRC7Q96NW7 1537 aa16.38■□□□□ 0.21
CDRT1-207ENST00000583965 PLEKHH1Q9ULM0 1364 aa16.38■□□□□ 0.21
CDRT1-207ENST00000583965 WAPLQ7Z5K2 1190 aa16.37■□□□□ 0.21
CDRT1-207ENST00000583965 ADGRL3Q9HAR2 1447 aa16.36■□□□□ 0.21
CDRT1-207ENST00000583965 CDC42BPGQ6DT37 1551 aa16.35■□□□□ 0.21
CDRT1-207ENST00000583965 TMEM94Q12767 1356 aa16.35■□□□□ 0.21
CDRT1-207ENST00000583965 FMN2Q9NZ56 1722 aa16.34■□□□□ 0.21
CDRT1-207ENST00000583965 SAFB2Q14151 953 aaKnown RBP eCLIP16.34■□□□□ 0.21
CDRT1-207ENST00000583965 TESK2Q96S53 571 aa16.34■□□□□ 0.21
CDRT1-207ENST00000583965 DCCP43146 1447 aa16.33■□□□□ 0.2
CDRT1-207ENST00000583965 RGPD8O14715 1765 aaPredicted RBP16.32■□□□□ 0.2
CDRT1-207ENST00000583965 ITSN1Q15811 1721 aa16.32■□□□□ 0.2
CDRT1-207ENST00000583965 MINK1Q8N4C8 1332 aaPredicted RBP16.32■□□□□ 0.2
CDRT1-207ENST00000583965 TULP4Q9NRJ4 1543 aa16.32■□□□□ 0.2
CDRT1-207ENST00000583965 EVC2Q86UK5 1308 aa16.31■□□□□ 0.2
CDRT1-207ENST00000583965 TMF1P82094 1093 aa16.31■□□□□ 0.2
CDRT1-207ENST00000583965 IQSEC2Q5JU85 1478 aa16.3■□□□□ 0.2
CDRT1-207ENST00000583965 MSH6P52701 1360 aa16.3■□□□□ 0.2
CDRT1-207ENST00000583965 C14orf37Q86TY3 774 aa16.3■□□□□ 0.2
CDRT1-207ENST00000583965 C19orf44Q9H6X5 657 aa16.3■□□□□ 0.2
CDRT1-207ENST00000583965 CDCA8Q53HL2 280 aa16.29■□□□□ 0.2
CDRT1-207ENST00000583965 HIRIP3Q9BW71 556 aaPredicted RBP16.29■□□□□ 0.2
CDRT1-207ENST00000583965 WASLO00401 505 aaPredicted RBP16.28■□□□□ 0.2
CDRT1-207ENST00000583965 RBM33Q96EV2 1170 aaKnown RBP16.28■□□□□ 0.2
CDRT1-207ENST00000583965 PUS7Q96PZ0 661 aaKnown RBP16.28■□□□□ 0.2
CDRT1-207ENST00000583965 TOPAZ1Q8N9V7 1692 aa16.27■□□□□ 0.19
CDRT1-207ENST00000583965 USP32Q8NFA0 1604 aa16.27■□□□□ 0.19
CDRT1-207ENST00000583965 DISP3Q9P2K9 1392 aa16.26■□□□□ 0.19
CDRT1-207ENST00000583965 CADPS2Q86UW7 1296 aa16.25■□□□□ 0.19
CDRT1-207ENST00000583965 CDK19Q9BWU1 502 aa16.25■□□□□ 0.19
CDRT1-207ENST00000583965 ANKARQ7Z5J8 1434 aa16.25■□□□□ 0.19
CDRT1-207ENST00000583965 MYOM1P52179 1685 aa16.24■□□□□ 0.19
CDRT1-207ENST00000583965 ATF3P18847 181 aa16.24■□□□□ 0.19
CDRT1-207ENST00000583965 ATAD2Q6PL18 1390 aa16.24■□□□□ 0.19
CDRT1-207ENST00000583965 SRPK2P78362 688 aaKnown RBP16.23■□□□□ 0.19
CDRT1-207ENST00000583965 ATP7BP35670 1465 aa16.22■□□□□ 0.19
CDRT1-207ENST00000583965 ZNF316A6NFI3 1004 aaPredicted RBP16.22■□□□□ 0.19
CDRT1-207ENST00000583965 KIF1AQ12756 1690 aa16.21■□□□□ 0.19
CDRT1-207ENST00000583965 CABP2Q9NPB3 220 aa16.21■□□□□ 0.19
CDRT1-207ENST00000583965 CCDC7Q96M83 1385 aa16.21■□□□□ 0.19
CDRT1-207ENST00000583965 NINLQ9Y2I6 1382 aa16.21■□□□□ 0.19
CDRT1-207ENST00000583965 AKAP12Q02952 1782 aa16.21■□□□□ 0.18
CDRT1-207ENST00000583965 KIF7Q2M1P5 1343 aa16.2■□□□□ 0.18
CDRT1-207ENST00000583965 MST1RQ04912 1400 aa16.2■□□□□ 0.18
CDRT1-207ENST00000583965 C11orf95C9JLR9 678 aaPredicted RBP16.2■□□□□ 0.18
CDRT1-207ENST00000583965 CERKQ8TCT0 537 aa16.2■□□□□ 0.18
CDRT1-207ENST00000583965 C1orf167Q5SNV9 1468 aa16.19■□□□□ 0.18
CDRT1-207ENST00000583965 NUDT16Q96DE0 195 aaKnown RBP16.19■□□□□ 0.18
CDRT1-207ENST00000583965 WASHC2AQ641Q2 1341 aa16.19■□□□□ 0.18
CDRT1-207ENST00000583965 CCDC61Q9Y6R9 512 aa16.18■□□□□ 0.18
CDRT1-207ENST00000583965 PRR36Q9H6K5 1346 aa16.18■□□□□ 0.18
CDRT1-207ENST00000583965 PPIP5K1Q6PFW1 1433 aa16.17■□□□□ 0.18
CDRT1-207ENST00000583965 MON2Q7Z3U7 1717 aa16.16■□□□□ 0.18
CDRT1-207ENST00000583965 NUTM2FA1L443 756 aa16.15■□□□□ 0.18
CDRT1-207ENST00000583965 TOM1O60784 492 aa16.15■□□□□ 0.18
CDRT1-207ENST00000583965 POLR3GLQ9BT43 218 aa16.15■□□□□ 0.18
CDRT1-207ENST00000583965 SLAIN2Q9P270 581 aa16.15■□□□□ 0.18
CDRT1-207ENST00000583965 PLEKHG3A1L390 1219 aa16.14■□□□□ 0.17
CDRT1-207ENST00000583965 ROBO1Q9Y6N7 1651 aa16.14■□□□□ 0.17
CDRT1-207ENST00000583965 NHSL1Q5SYE7 1610 aa16.13■□□□□ 0.17
CDRT1-207ENST00000583965 ESCO1Q5FWF5 840 aa16.12■□□□□ 0.17
CDRT1-207ENST00000583965 TMC1Q8TDI8 760 aa16.12■□□□□ 0.17
CDRT1-207ENST00000583965 CABP1Q9NZU7 370 aa16.12■□□□□ 0.17
CDRT1-207ENST00000583965 PHF8Q9UPP1 1060 aa16.12■□□□□ 0.17
CDRT1-207ENST00000583965 POLR3AO14802 1390 aaPredicted RBP16.12■□□□□ 0.17
CDRT1-207ENST00000583965 TERF2IPQ9NYB0 399 aa16.11■□□□□ 0.17
CDRT1-207ENST00000583965 ANKRD36BQ8N2N9 1353 aa16.11■□□□□ 0.17
CDRT1-207ENST00000583965 CD163L1Q9NR16 1453 aa16.1■□□□□ 0.17
CDRT1-207ENST00000583965 ORAI2Q96SN7 254 aa16.1■□□□□ 0.17
CDRT1-207ENST00000583965 SLC12A5Q9H2X9 1139 aa16.1■□□□□ 0.17
CDRT1-207ENST00000583965 CPSF1Q10570 1443 aaKnown RBP16.1■□□□□ 0.17
CDRT1-207ENST00000583965 NRKQ7Z2Y5 1582 aa16.09■□□□□ 0.17
CDRT1-207ENST00000583965 UBAP1LF5GYI3 381 aa16.09■□□□□ 0.17
CDRT1-207ENST00000583965 HDGFL2Q7Z4V5 671 aaPredicted RBP16.09■□□□□ 0.17
CDRT1-207ENST00000583965 ZNF692Q9BU19 519 aaPredicted RBP16.09■□□□□ 0.17
CDRT1-207ENST00000583965 KIF20BQ96Q89 1820 aa16.08■□□□□ 0.17
CDRT1-207ENST00000583965 BRINP3Q76B58 766 aa16.08■□□□□ 0.16
CDRT1-207ENST00000583965 NGDNQ8NEJ9 315 aaKnown RBP16.08■□□□□ 0.16
CDRT1-207ENST00000583965 ACEP12821 1306 aa16.08■□□□□ 0.16
CDRT1-207ENST00000583965 BRD4O60885 1362 aaPredicted RBP16.08■□□□□ 0.16
CDRT1-207ENST00000583965 TRPM3Q9HCF6 1732 aaPredicted RBP16.08■□□□□ 0.16
CDRT1-207ENST00000583965 PMFBP1Q8TBY8 1022 aa16.07■□□□□ 0.16
CDRT1-207ENST00000583965 A0A1W2PP64 1363 aa16.07■□□□□ 0.16
CDRT1-207ENST00000583965 AHDC1Q5TGY3 1603 aaPredicted RBP16.07■□□□□ 0.16
CDRT1-207ENST00000583965 PHLPP1O60346 1717 aa16.06■□□□□ 0.16
CDRT1-207ENST00000583965 KTN1Q86UP2 1357 aaKnown RBP16.06■□□□□ 0.16
CDRT1-207ENST00000583965 NPHP3Q7Z494 1330 aa16.06■□□□□ 0.16
CDRT1-207ENST00000583965 USP6P35125 1406 aa16.05■□□□□ 0.16
CDRT1-207ENST00000583965 EDC4Q6P2E9 1401 aaKnown RBP16.05■□□□□ 0.16
CDRT1-207ENST00000583965 PANK3Q9H999 370 aa16.05■□□□□ 0.16
CDRT1-207ENST00000583965 ANKRD26Q9UPS8 1709 aa16.05■□□□□ 0.16
CDRT1-207ENST00000583965 DDX10Q13206 875 aaKnown RBP16.04■□□□□ 0.16
CDRT1-207ENST00000583965 ALS2Q96Q42 1657 aa16.03■□□□□ 0.16
CDRT1-207ENST00000583965 FOXO3O43524 673 aa16.03■□□□□ 0.16
CDRT1-207ENST00000583965 PSME1Q06323 249 aa16.03■□□□□ 0.16
CDRT1-207ENST00000583965 PXDNQ92626 1479 aa16.03■□□□□ 0.16
CDRT1-207ENST00000583965 USP54Q70EL1 1684 aa16.02■□□□□ 0.16
CDRT1-207ENST00000583965 SSH2Q76I76 1423 aa16.02■□□□□ 0.15
CDRT1-207ENST00000583965 NSD3Q9BZ95 1437 aa16.02■□□□□ 0.15
CDRT1-207ENST00000583965 PIP4K2BP78356 416 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms