RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	CCER1	Q8TC90	406 aa	Predicted RBP	14.15	□□□□□ -0.14
NARF-222	ENST00000583908	PRAM1	Q96QH2	718 aa		14.14	□□□□□ -0.15
NARF-222	ENST00000583908	TRAK1	Q9UPV9	953 aa		14.14	□□□□□ -0.15
NARF-222	ENST00000583908	MST1R	Q04912	1400 aa		14.14	□□□□□ -0.15
NARF-222	ENST00000583908	ROCK2	O75116	1388 aa	Known RBP	14.13	□□□□□ -0.15
NARF-222	ENST00000583908	HSPA1L	P34931	641 aa		14.12	□□□□□ -0.15
NARF-222	ENST00000583908	WAPL	Q7Z5K2	1190 aa		14.12	□□□□□ -0.15
NARF-222	ENST00000583908	TIMELESS	Q9UNS1	1208 aa		14.12	□□□□□ -0.15
NARF-222	ENST00000583908	ADGRB2	O60241	1585 aa		14.11	□□□□□ -0.15
NARF-222	ENST00000583908	TRPM1	Q7Z4N2	1603 aa		14.11	□□□□□ -0.15
NARF-222	ENST00000583908	C1orf167	Q5SNV9	1468 aa		14.1	□□□□□ -0.15
NARF-222	ENST00000583908	ARHGEF28	Q8N1W1	1705 aa	Known RBP	14.1	□□□□□ -0.15
NARF-222	ENST00000583908	PLEKHH1	Q9ULM0	1364 aa		14.09	□□□□□ -0.15
NARF-222	ENST00000583908	AHDC1	Q5TGY3	1603 aa	Predicted RBP	14.09	□□□□□ -0.15
NARF-222	ENST00000583908	SAFB2	Q14151	953 aa	Known RBP eCLIP	14.09	□□□□□ -0.15
NARF-222	ENST00000583908	RALGAPB	Q86X10	1494 aa		14.08	□□□□□ -0.16
NARF-222	ENST00000583908	PHLPP1	O60346	1717 aa		14.08	□□□□□ -0.16
NARF-222	ENST00000583908	BRINP3	Q76B58	766 aa		14.08	□□□□□ -0.16
NARF-222	ENST00000583908	ANKAR	Q7Z5J8	1434 aa		14.07	□□□□□ -0.16
NARF-222	ENST00000583908	FMN2	Q9NZ56	1722 aa		14.07	□□□□□ -0.16
NARF-222	ENST00000583908	KIF1A	Q12756	1690 aa		14.06	□□□□□ -0.16
NARF-222	ENST00000583908	MINK1	Q8N4C8	1332 aa	Predicted RBP	14.06	□□□□□ -0.16
NARF-222	ENST00000583908	CENPJ	Q9HC77	1338 aa	Predicted RBP	14.06	□□□□□ -0.16
NARF-222	ENST00000583908	NBPF1	Q3BBV0	1214 aa		14.05	□□□□□ -0.16
NARF-222	ENST00000583908	ESCO1	Q5FWF5	840 aa		14.05	□□□□□ -0.16
NARF-222	ENST00000583908	CARD11	Q9BXL7	1154 aa		14.05	□□□□□ -0.16
NARF-222	ENST00000583908	NPHP3	Q7Z494	1330 aa		14.05	□□□□□ -0.16
NARF-222	ENST00000583908	GPRASP1	Q5JY77	1395 aa		14.05	□□□□□ -0.16
NARF-222	ENST00000583908	JCAD	Q9P266	1359 aa		14.05	□□□□□ -0.16
NARF-222	ENST00000583908	TULP4	Q9NRJ4	1543 aa		14.05	□□□□□ -0.16
NARF-222	ENST00000583908	NHSL1	Q5SYE7	1610 aa		14.04	□□□□□ -0.16
NARF-222	ENST00000583908	COL16A1	Q07092	1604 aa	Predicted RBP	14.03	□□□□□ -0.16
NARF-222	ENST00000583908	WASL	O00401	505 aa	Predicted RBP	14.02	□□□□□ -0.17
NARF-222	ENST00000583908	SLC24A1	O60721	1099 aa		14.02	□□□□□ -0.17
NARF-222	ENST00000583908	HIRIP3	Q9BW71	556 aa	Predicted RBP	14.02	□□□□□ -0.17
NARF-222	ENST00000583908	QRICH2	Q9H0J4	1663 aa		14.01	□□□□□ -0.17
NARF-222	ENST00000583908	NUTM2F	A1L443	756 aa		14.01	□□□□□ -0.17
NARF-222	ENST00000583908	LRRC59	Q96AG4	307 aa	Known RBP	14.01	□□□□□ -0.17
NARF-222	ENST00000583908	SPATA31A6	Q5VVP1	1343 aa		14	□□□□□ -0.17
NARF-222	ENST00000583908	NBPF8	Q3BBV2	869 aa		14	□□□□□ -0.17
NARF-222	ENST00000583908	ORAI2	Q96SN7	254 aa		14	□□□□□ -0.17
NARF-222	ENST00000583908	ITSN1	Q15811	1721 aa		14	□□□□□ -0.17
NARF-222	ENST00000583908	EVC2	Q86UK5	1308 aa		13.99	□□□□□ -0.17
NARF-222	ENST00000583908	SRPK2	P78362	688 aa	Known RBP	13.99	□□□□□ -0.17
NARF-222	ENST00000583908	PHF8	Q9UPP1	1060 aa		13.99	□□□□□ -0.17
NARF-222	ENST00000583908	SHPRH	Q149N8	1683 aa		13.98	□□□□□ -0.17
NARF-222	ENST00000583908	PSME1	Q06323	249 aa		13.98	□□□□□ -0.17
NARF-222	ENST00000583908	SBNO2	Q9Y2G9	1366 aa		13.97	□□□□□ -0.17
NARF-222	ENST00000583908	MED1	Q15648	1581 aa	Predicted RBP	13.97	□□□□□ -0.17
NARF-222	ENST00000583908	SOS2	Q07890	1332 aa	Predicted RBP	13.96	□□□□□ -0.17
NARF-222	ENST00000583908	ATP7B	P35670	1465 aa		13.96	□□□□□ -0.17
NARF-222	ENST00000583908	FOXO3	O43524	673 aa		13.96	□□□□□ -0.17
NARF-222	ENST00000583908	CDK19	Q9BWU1	502 aa		13.96	□□□□□ -0.17
NARF-222	ENST00000583908	DISP3	Q9P2K9	1392 aa		13.96	□□□□□ -0.18
NARF-222	ENST00000583908	MEX3C	Q5U5Q3	659 aa	Known RBP	13.95	□□□□□ -0.18
NARF-222	ENST00000583908	NGDN	Q8NEJ9	315 aa	Known RBP	13.95	□□□□□ -0.18
NARF-222	ENST00000583908	NUDT16	Q96DE0	195 aa	Known RBP	13.95	□□□□□ -0.18
NARF-222	ENST00000583908	PXDN	Q92626	1479 aa		13.94	□□□□□ -0.18
NARF-222	ENST00000583908	USP32	Q8NFA0	1604 aa		13.94	□□□□□ -0.18
NARF-222	ENST00000583908	CCDC61	Q9Y6R9	512 aa		13.94	□□□□□ -0.18
NARF-222	ENST00000583908	ATAD2	Q6PL18	1390 aa		13.94	□□□□□ -0.18
NARF-222	ENST00000583908	ARHGEF10	O15013	1369 aa		13.93	□□□□□ -0.18
NARF-222	ENST00000583908	USP47	Q96K76	1375 aa		13.93	□□□□□ -0.18
NARF-222	ENST00000583908	TOPAZ1	Q8N9V7	1692 aa		13.92	□□□□□ -0.18
NARF-222	ENST00000583908	KRT28	Q7Z3Y7	464 aa		13.92	□□□□□ -0.18
NARF-222	ENST00000583908	PMFBP1	Q8TBY8	1022 aa		13.92	□□□□□ -0.18
NARF-222	ENST00000583908	DDX17	Q92841	729 aa	Known RBP	13.92	□□□□□ -0.18
NARF-222	ENST00000583908	SBNO1	A3KN83	1393 aa		13.92	□□□□□ -0.18
NARF-222	ENST00000583908	PNPLA6	Q8IY17	1366 aa		13.92	□□□□□ -0.18
NARF-222	ENST00000583908	TNS3	Q68CZ2	1445 aa		13.91	□□□□□ -0.18
NARF-222	ENST00000583908	PPIP5K1	Q6PFW1	1433 aa		13.91	□□□□□ -0.18
NARF-222	ENST00000583908	RGPD8	O14715	1765 aa	Predicted RBP	13.91	□□□□□ -0.18
NARF-222	ENST00000583908	PRR36	Q9H6K5	1346 aa		13.9	□□□□□ -0.18
NARF-222	ENST00000583908	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.9	□□□□□ -0.19
NARF-222	ENST00000583908	BRD4	O60885	1362 aa	Predicted RBP	13.89	□□□□□ -0.19
NARF-222	ENST00000583908	HAP1	P54257	671 aa	Predicted RBP	13.89	□□□□□ -0.19
NARF-222	ENST00000583908	XPC	Q01831	940 aa	Predicted RBP	13.89	□□□□□ -0.19
NARF-222	ENST00000583908	CDCA8	Q53HL2	280 aa		13.89	□□□□□ -0.19
NARF-222	ENST00000583908	CABP2	Q9NPB3	220 aa		13.89	□□□□□ -0.19
NARF-222	ENST00000583908	SPATA31A3	Q5VYP0	1347 aa		13.89	□□□□□ -0.19
NARF-222	ENST00000583908	POLR3A	O14802	1390 aa	Predicted RBP	13.88	□□□□□ -0.19
NARF-222	ENST00000583908	NINL	Q9Y2I6	1382 aa		13.88	□□□□□ -0.19
NARF-222	ENST00000583908	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.88	□□□□□ -0.19
NARF-222	ENST00000583908	NUTM2E	B1AL46	878 aa	Predicted RBP	13.88	□□□□□ -0.19
NARF-222	ENST00000583908	TMF1	P82094	1093 aa		13.88	□□□□□ -0.19
NARF-222	ENST00000583908	LMOD2	Q6P5Q4	547 aa		13.88	□□□□□ -0.19
NARF-222	ENST00000583908	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.88	□□□□□ -0.19
NARF-222	ENST00000583908	ST20-MTHFS	A0A0A6YYL1	179 aa		13.87	□□□□□ -0.19
NARF-222	ENST00000583908	PLEKHG3	A1L390	1219 aa		13.87	□□□□□ -0.19
NARF-222	ENST00000583908	PAK3	O75914	559 aa	Predicted RBP	13.87	□□□□□ -0.19
NARF-222	ENST00000583908	PUS7	Q96PZ0	661 aa	Known RBP	13.87	□□□□□ -0.19
NARF-222	ENST00000583908	ACE	P12821	1306 aa		13.86	□□□□□ -0.19
NARF-222	ENST00000583908	LRP6	O75581	1613 aa		13.85	□□□□□ -0.19
NARF-222	ENST00000583908	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
NARF-222	ENST00000583908	ZNF772	Q68DY9	489 aa	Predicted RBP	13.84	□□□□□ -0.19
NARF-222	ENST00000583908	ZNF692	Q9BU19	519 aa	Predicted RBP	13.84	□□□□□ -0.19
NARF-222	ENST00000583908	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.83	□□□□□ -0.2
NARF-222	ENST00000583908	CABP1	Q9NZU7	370 aa		13.83	□□□□□ -0.2
NARF-222	ENST00000583908	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.83	□□□□□ -0.2
NARF-222	ENST00000583908	TMC1	Q8TDI8	760 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms