RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 SRCAPQ6ZRS2 3230 aa30.73■■■□□ 2.51
SRSF1-206ENST00000583741 IFT172Q9UG01 1749 aa30.71■■■□□ 2.51
SRSF1-206ENST00000583741 ADGRF5Q8IZF2 1346 aa30.7■■■□□ 2.51
SRSF1-206ENST00000583741 EP400Q96L91 3159 aa30.7■■■□□ 2.51
SRSF1-206ENST00000583741 USP21Q9UK80 565 aa30.7■■■□□ 2.5
SRSF1-206ENST00000583741 PXDNQ92626 1479 aa30.69■■■□□ 2.5
SRSF1-206ENST00000583741 MYOM2P54296 1465 aa30.69■■■□□ 2.5
SRSF1-206ENST00000583741 ESCO1Q5FWF5 840 aa30.67■■■□□ 2.5
SRSF1-206ENST00000583741 MARF1Q9Y4F3 1742 aaKnown RBP30.66■■■□□ 2.5
SRSF1-206ENST00000583741 FNBP4Q8N3X1 1017 aaPredicted RBP30.66■■■□□ 2.5
SRSF1-206ENST00000583741 CCDC144AA2RUR9 1427 aa30.66■■■□□ 2.5
SRSF1-206ENST00000583741 TECPR2O15040 1411 aa30.66■■■□□ 2.5
SRSF1-206ENST00000583741 SPATA31E1Q6ZUB1 1445 aa30.66■■■□□ 2.5
SRSF1-206ENST00000583741 NPHP3Q7Z494 1330 aa30.65■■■□□ 2.5
SRSF1-206ENST00000583741 TRPC5Q9UL62 973 aaPredicted RBP30.64■■■□□ 2.5
SRSF1-206ENST00000583741 ATRNO75882 1429 aa30.64■■■□□ 2.5
SRSF1-206ENST00000583741 KNDC1Q76NI1 1749 aa30.64■■■□□ 2.49
SRSF1-206ENST00000583741 XPCQ01831 940 aaPredicted RBP30.62■■■□□ 2.49
SRSF1-206ENST00000583741 RGL3Q3MIN7 710 aa30.62■■■□□ 2.49
SRSF1-206ENST00000583741 STK26Q9P289 416 aa30.62■■■□□ 2.49
SRSF1-206ENST00000583741 ATAD2Q6PL18 1390 aa30.61■■■□□ 2.49
SRSF1-206ENST00000583741 WAPLQ7Z5K2 1190 aa30.61■■■□□ 2.49
SRSF1-206ENST00000583741 LRPPRCP42704 1394 aaKnown RBP30.6■■■□□ 2.49
SRSF1-206ENST00000583741 FOXO3O43524 673 aa30.6■■■□□ 2.49
SRSF1-206ENST00000583741 PLEKHH1Q9ULM0 1364 aa30.59■■■□□ 2.49
SRSF1-206ENST00000583741 BCL9LQ86UU0 1499 aa30.59■■■□□ 2.49
SRSF1-206ENST00000583741 FMN2Q9NZ56 1722 aa30.58■■■□□ 2.49
SRSF1-206ENST00000583741 NUTM2FA1L443 756 aa30.58■■■□□ 2.49
SRSF1-206ENST00000583741 PIK3C2GO75747 1445 aa30.58■■■□□ 2.49
SRSF1-206ENST00000583741 ANKRD30BQ9BXX2 1392 aa30.58■■■□□ 2.49
SRSF1-206ENST00000583741 TMEM132EQ6IEE7 984 aa30.57■■■□□ 2.48
SRSF1-206ENST00000583741 ABCC11Q96J66 1382 aa30.56■■■□□ 2.48
SRSF1-206ENST00000583741 MPHOSPH9Q99550 1183 aa30.54■■■□□ 2.48
SRSF1-206ENST00000583741 KIF1AQ12756 1690 aa30.52■■■□□ 2.48
SRSF1-206ENST00000583741 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.51■■■□□ 2.48
SRSF1-206ENST00000583741 YTHDC2Q9H6S0 1430 aaKnown RBP30.51■■■□□ 2.47
SRSF1-206ENST00000583741 RGPD8O14715 1765 aaPredicted RBP30.49■■■□□ 2.47
SRSF1-206ENST00000583741 SPATA31A3Q5VYP0 1347 aa30.45■■■□□ 2.47
SRSF1-206ENST00000583741 USP32Q8NFA0 1604 aa30.45■■■□□ 2.46
SRSF1-206ENST00000583741 GJD4Q96KN9 370 aaPredicted RBP30.44■■■□□ 2.46
SRSF1-206ENST00000583741 SLIT2O94813 1529 aa30.44■■■□□ 2.46
SRSF1-206ENST00000583741 GLI3P10071 1580 aa30.44■■■□□ 2.46
SRSF1-206ENST00000583741 NRXN1Q9ULB1 1477 aa30.42■■■□□ 2.46
SRSF1-206ENST00000583741 RALGAPBQ86X10 1494 aa30.4■■■□□ 2.46
SRSF1-206ENST00000583741 C14orf93Q9H972 538 aaKnown RBP30.39■■■□□ 2.46
SRSF1-206ENST00000583741 KRT28Q7Z3Y7 464 aa30.38■■■□□ 2.45
SRSF1-206ENST00000583741 UNC5CLQ8IV45 518 aa30.38■■■□□ 2.45
SRSF1-206ENST00000583741 SIRT1Q96EB6 747 aa30.38■■■□□ 2.45
SRSF1-206ENST00000583741 TNS3Q68CZ2 1445 aa30.37■■■□□ 2.45
SRSF1-206ENST00000583741 BRWD3Q6RI45 1802 aa30.37■■■□□ 2.45
SRSF1-206ENST00000583741 ABCA3Q99758 1704 aa30.37■■■□□ 2.45
SRSF1-206ENST00000583741 CFAP70Q5T0N1 1121 aa30.36■■■□□ 2.45
SRSF1-206ENST00000583741 PHF8Q9UPP1 1060 aa30.35■■■□□ 2.45
SRSF1-206ENST00000583741 PLCH1Q4KWH8 1693 aa30.35■■■□□ 2.45
SRSF1-206ENST00000583741 CCDC125Q86Z20 511 aa30.33■■■□□ 2.45
SRSF1-206ENST00000583741 ZRANB1Q9UGI0 708 aa30.32■■■□□ 2.44
SRSF1-206ENST00000583741 DHX57Q6P158 1386 aaKnown RBP30.32■■■□□ 2.44
SRSF1-206ENST00000583741 CABLES1Q8TDN4 633 aa30.31■■■□□ 2.44
SRSF1-206ENST00000583741 SAFB2Q14151 953 aaKnown RBP eCLIP30.31■■■□□ 2.44
SRSF1-206ENST00000583741 PRAM1Q96QH2 718 aa30.3■■■□□ 2.44
SRSF1-206ENST00000583741 NWD2Q9ULI1 1742 aa30.3■■■□□ 2.44
SRSF1-206ENST00000583741 DLC1Q96QB1 1528 aa30.28■■■□□ 2.44
SRSF1-206ENST00000583741 PLEKHG5O94827 1062 aa30.28■■■□□ 2.44
SRSF1-206ENST00000583741 SBNO1A3KN83 1393 aa30.27■■■□□ 2.44
SRSF1-206ENST00000583741 PSME1Q06323 249 aa30.27■■■□□ 2.44
SRSF1-206ENST00000583741 ADGRB2O60241 1585 aa30.26■■■□□ 2.44
SRSF1-206ENST00000583741 HAP1P54257 671 aaPredicted RBP30.26■■■□□ 2.44
SRSF1-206ENST00000583741 BLMP54132 1417 aaPredicted RBP30.26■■■□□ 2.43
SRSF1-206ENST00000583741 ADGRB1O14514 1584 aa30.25■■■□□ 2.43
SRSF1-206ENST00000583741 TRPM3Q9HCF6 1732 aaPredicted RBP30.23■■■□□ 2.43
SRSF1-206ENST00000583741 ANKARQ7Z5J8 1434 aa30.23■■■□□ 2.43
SRSF1-206ENST00000583741 VPS72Q15906 364 aa30.23■■■□□ 2.43
SRSF1-206ENST00000583741 LMOD2Q6P5Q4 547 aa30.23■■■□□ 2.43
SRSF1-206ENST00000583741 ARHGEF10O15013 1369 aa30.23■■■□□ 2.43
SRSF1-206ENST00000583741 SEPT12Q8IYM1 358 aa30.22■■■□□ 2.43
SRSF1-206ENST00000583741 TRIM26Q12899 539 aaPredicted RBP30.21■■■□□ 2.43
SRSF1-206ENST00000583741 PMFBP1Q8TBY8 1022 aa30.21■■■□□ 2.43
SRSF1-206ENST00000583741 POGKQ9P215 609 aa30.2■■■□□ 2.43
SRSF1-206ENST00000583741 ACIN1Q9UKV3 1341 aaKnown RBP30.2■■■□□ 2.43
SRSF1-206ENST00000583741 NRAPQ86VF7 1730 aa30.19■■■□□ 2.42
SRSF1-206ENST00000583741 RAB3GAP2Q9H2M9 1393 aa30.18■■■□□ 2.42
SRSF1-206ENST00000583741 DEFB132Q7Z7B7 95 aa30.18■■■□□ 2.42
SRSF1-206ENST00000583741 ALS2Q96Q42 1657 aa30.18■■■□□ 2.42
SRSF1-206ENST00000583741 CCDC9Q9Y3X0 531 aaKnown RBP30.17■■■□□ 2.42
SRSF1-206ENST00000583741 FAM83GA6ND36 823 aa30.16■■■□□ 2.42
SRSF1-206ENST00000583741 ONECUT3O60422 494 aaPredicted RBP30.16■■■□□ 2.42
SRSF1-206ENST00000583741 HIRIP3Q9BW71 556 aaPredicted RBP30.16■■■□□ 2.42
SRSF1-206ENST00000583741 TRAK1Q9UPV9 953 aa30.14■■■□□ 2.42
SRSF1-206ENST00000583741 PRR36Q9H6K5 1346 aa30.13■■■□□ 2.41
SRSF1-206ENST00000583741 TULP4Q9NRJ4 1543 aa30.12■■■□□ 2.41
SRSF1-206ENST00000583741 CRYBG1Q9Y4K1 1723 aa30.11■■■□□ 2.41
SRSF1-206ENST00000583741 MINK1Q8N4C8 1332 aaPredicted RBP30.11■■■□□ 2.41
SRSF1-206ENST00000583741 KRT27Q7Z3Y8 459 aa30.11■■■□□ 2.41
SRSF1-206ENST00000583741 COL14A1Q05707 1796 aaKnown RBP30.1■■■□□ 2.41
SRSF1-206ENST00000583741 SF3B2Q13435 895 aaKnown RBP30.07■■■□□ 2.4
SRSF1-206ENST00000583741 GPRASP1Q5JY77 1395 aa30.07■■■□□ 2.4
SRSF1-206ENST00000583741 BTG4Q9NY30 223 aa30.06■■■□□ 2.4
SRSF1-206ENST00000583741 EIF3AQ14152 1382 aaKnown RBP30.06■■■□□ 2.4
SRSF1-206ENST00000583741 KDM2AQ9Y2K7 1162 aa30.06■■■□□ 2.4
SRSF1-206ENST00000583741 ARHGEF28Q8N1W1 1705 aaKnown RBP30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms