RNA–Protein interactions for RNA: ENST00000583361.1

PRKCA-204, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-204ENST00000583361 SAFB2Q14151 953 aaKnown RBP eCLIP11.51□□□□□ -0.57
PRKCA-204ENST00000583361 NUTM2AQ8IVF1 878 aaPredicted RBP11.51□□□□□ -0.57
PRKCA-204ENST00000583361 DDX17Q92841 729 aaKnown RBP11.51□□□□□ -0.57
PRKCA-204ENST00000583361 FMN2Q9NZ56 1722 aa11.51□□□□□ -0.57
PRKCA-204ENST00000583361 PRAG1Q86YV5 1406 aa11.51□□□□□ -0.57
PRKCA-204ENST00000583361 NRXN1Q9ULB1 1477 aa11.51□□□□□ -0.57
PRKCA-204ENST00000583361 C14orf93Q9H972 538 aaKnown RBP11.5□□□□□ -0.57
PRKCA-204ENST00000583361 POGKQ9P215 609 aa11.5□□□□□ -0.57
PRKCA-204ENST00000583361 ABCC11Q96J66 1382 aa11.5□□□□□ -0.57
PRKCA-204ENST00000583361 PLEKHH1Q9ULM0 1364 aa11.5□□□□□ -0.57
PRKCA-204ENST00000583361 TECPR2O15040 1411 aa11.5□□□□□ -0.57
PRKCA-204ENST00000583361 SOCS7O14512 581 aa11.49□□□□□ -0.57
PRKCA-204ENST00000583361 ESCO1Q5FWF5 840 aa11.49□□□□□ -0.57
PRKCA-204ENST00000583361 ORAI2Q96SN7 254 aa11.49□□□□□ -0.57
PRKCA-204ENST00000583361 LRRC59Q96AG4 307 aaKnown RBP11.48□□□□□ -0.57
PRKCA-204ENST00000583361 TRAK1Q9UPV9 953 aa11.48□□□□□ -0.57
PRKCA-204ENST00000583361 SPATA31A6Q5VVP1 1343 aa11.48□□□□□ -0.57
PRKCA-204ENST00000583361 PRAM1Q96QH2 718 aa11.47□□□□□ -0.57
PRKCA-204ENST00000583361 KIF1AQ12756 1690 aa11.46□□□□□ -0.57
PRKCA-204ENST00000583361 LRP6O75581 1613 aa11.46□□□□□ -0.57
PRKCA-204ENST00000583361 ARHGEF28Q8N1W1 1705 aaKnown RBP11.46□□□□□ -0.58
PRKCA-204ENST00000583361 STAC3Q96MF2 364 aa11.45□□□□□ -0.58
PRKCA-204ENST00000583361 KIAA1210Q9ULL0 1709 aa11.45□□□□□ -0.58
PRKCA-204ENST00000583361 ADGRB1O14514 1584 aa11.45□□□□□ -0.58
PRKCA-204ENST00000583361 DLC1Q96QB1 1528 aa11.45□□□□□ -0.58
PRKCA-204ENST00000583361 NPHP3Q7Z494 1330 aa11.44□□□□□ -0.58
PRKCA-204ENST00000583361 MINK1Q8N4C8 1332 aaPredicted RBP11.44□□□□□ -0.58
PRKCA-204ENST00000583361 XPCQ01831 940 aaPredicted RBP11.44□□□□□ -0.58
PRKCA-204ENST00000583361 NEUROD1Q13562 356 aa11.44□□□□□ -0.58
PRKCA-204ENST00000583361 RGS17Q9UGC6 210 aaPredicted RBP11.44□□□□□ -0.58
PRKCA-204ENST00000583361 PNPLA6Q8IY17 1366 aa11.43□□□□□ -0.58
PRKCA-204ENST00000583361 FOXO3O43524 673 aa11.43□□□□□ -0.58
PRKCA-204ENST00000583361 SIRT1Q96EB6 747 aa11.43□□□□□ -0.58
PRKCA-204ENST00000583361 HIRIP3Q9BW71 556 aaPredicted RBP11.43□□□□□ -0.58
PRKCA-204ENST00000583361 ADAMTS2O95450 1211 aa11.42□□□□□ -0.58
PRKCA-204ENST00000583361 POTEAQ6S8J7 498 aa11.42□□□□□ -0.58
PRKCA-204ENST00000583361 C8orf37Q96NL8 207 aa11.42□□□□□ -0.58
PRKCA-204ENST00000583361 ITSN1Q15811 1721 aa11.42□□□□□ -0.58
PRKCA-204ENST00000583361 MARF1Q9Y4F3 1742 aaKnown RBP11.42□□□□□ -0.58
PRKCA-204ENST00000583361 SOS2Q07890 1332 aaPredicted RBP11.41□□□□□ -0.58
PRKCA-204ENST00000583361 PLEKHG5O94827 1062 aa11.41□□□□□ -0.58
PRKCA-204ENST00000583361 TRIM26Q12899 539 aaPredicted RBP11.41□□□□□ -0.58
PRKCA-204ENST00000583361 ZNF772Q68DY9 489 aaPredicted RBP11.41□□□□□ -0.58
PRKCA-204ENST00000583361 SIN3AQ96ST3 1273 aa11.41□□□□□ -0.58
PRKCA-204ENST00000583361 ADGRB2O60241 1585 aa11.41□□□□□ -0.58
PRKCA-204ENST00000583361 PHF8Q9UPP1 1060 aa11.4□□□□□ -0.58
PRKCA-204ENST00000583361 AFF2P51816 1311 aa11.39□□□□□ -0.59
PRKCA-204ENST00000583361 PXDNQ92626 1479 aa11.39□□□□□ -0.59
PRKCA-204ENST00000583361 USP32Q8NFA0 1604 aa11.39□□□□□ -0.59
PRKCA-204ENST00000583361 COL22A1Q8NFW1 1626 aaPredicted RBP11.39□□□□□ -0.59
PRKCA-204ENST00000583361 HAP1P54257 671 aaPredicted RBP11.39□□□□□ -0.59
PRKCA-204ENST00000583361 LMOD2Q6P5Q4 547 aa11.39□□□□□ -0.59
PRKCA-204ENST00000583361 PMFBP1Q8TBY8 1022 aa11.39□□□□□ -0.59
PRKCA-204ENST00000583361 NGLY1Q96IV0 654 aa11.39□□□□□ -0.59
PRKCA-204ENST00000583361 PSME1Q06323 249 aa11.38□□□□□ -0.59
PRKCA-204ENST00000583361 KRT28Q7Z3Y7 464 aa11.38□□□□□ -0.59
PRKCA-204ENST00000583361 QRICH2Q9H0J4 1663 aa11.38□□□□□ -0.59
PRKCA-204ENST00000583361 EIF3AQ14152 1382 aaKnown RBP11.38□□□□□ -0.59
PRKCA-204ENST00000583361 L3MBTL2Q969R5 705 aa11.37□□□□□ -0.59
PRKCA-204ENST00000583361 TRPM1Q7Z4N2 1603 aa11.37□□□□□ -0.59
PRKCA-204ENST00000583361 ANKARQ7Z5J8 1434 aa11.36□□□□□ -0.59
PRKCA-204ENST00000583361 TULP4Q9NRJ4 1543 aa11.36□□□□□ -0.59
PRKCA-204ENST00000583361 WASLO00401 505 aaPredicted RBP11.36□□□□□ -0.59
PRKCA-204ENST00000583361 NBPF1Q3BBV0 1214 aa11.36□□□□□ -0.59
PRKCA-204ENST00000583361 RXRBP28702 533 aa11.35□□□□□ -0.59
PRKCA-204ENST00000583361 GPRASP1Q5JY77 1395 aa11.34□□□□□ -0.59
PRKCA-204ENST00000583361 NGDNQ8NEJ9 315 aaKnown RBP11.34□□□□□ -0.59
PRKCA-204ENST00000583361 ABCA3Q99758 1704 aa11.34□□□□□ -0.59
PRKCA-204ENST00000583361 TNS3Q68CZ2 1445 aa11.34□□□□□ -0.59
PRKCA-204ENST00000583361 SPATA31A3Q5VYP0 1347 aa11.34□□□□□ -0.59
PRKCA-204ENST00000583361 TONSLQ96HA7 1378 aa11.33□□□□□ -0.6
PRKCA-204ENST00000583361 PAK3O75914 559 aaPredicted RBP11.33□□□□□ -0.6
PRKCA-204ENST00000583361 QTRT2Q9H974 415 aaKnown RBP11.33□□□□□ -0.6
PRKCA-204ENST00000583361 USP21Q9UK80 565 aa11.33□□□□□ -0.6
PRKCA-204ENST00000583361 CENPJQ9HC77 1338 aaPredicted RBP11.33□□□□□ -0.6
PRKCA-204ENST00000583361 TRPM3Q9HCF6 1732 aaPredicted RBP11.32□□□□□ -0.6
PRKCA-204ENST00000583361 ROCK2O75116 1388 aaKnown RBP11.32□□□□□ -0.6
PRKCA-204ENST00000583361 SRPK2P78362 688 aaKnown RBP11.32□□□□□ -0.6
PRKCA-204ENST00000583361 CDK19Q9BWU1 502 aa11.32□□□□□ -0.6
PRKCA-204ENST00000583361 PRR36Q9H6K5 1346 aa11.32□□□□□ -0.6
PRKCA-204ENST00000583361 PLCH1Q4KWH8 1693 aa11.31□□□□□ -0.6
PRKCA-204ENST00000583361 TOPAZ1Q8N9V7 1692 aa11.31□□□□□ -0.6
PRKCA-204ENST00000583361 CABLES1Q8TDN4 633 aa11.31□□□□□ -0.6
PRKCA-204ENST00000583361 NUDT16Q96DE0 195 aaKnown RBP11.31□□□□□ -0.6
PRKCA-204ENST00000583361 ATP7BP35670 1465 aa11.31□□□□□ -0.6
PRKCA-204ENST00000583361 ALS2Q96Q42 1657 aa11.3□□□□□ -0.6
PRKCA-204ENST00000583361 ARHGEF10O15013 1369 aa11.3□□□□□ -0.6
PRKCA-204ENST00000583361 SBNO1A3KN83 1393 aa11.29□□□□□ -0.6
PRKCA-204ENST00000583361 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.29□□□□□ -0.6
PRKCA-204ENST00000583361 RBM6P78332 1123 aaKnown RBP11.29□□□□□ -0.6
PRKCA-204ENST00000583361 TRPC5Q9UL62 973 aaPredicted RBP11.29□□□□□ -0.6
PRKCA-204ENST00000583361 NWD2Q9ULI1 1742 aa11.27□□□□□ -0.61
PRKCA-204ENST00000583361 CABP2Q9NPB3 220 aa11.27□□□□□ -0.61
PRKCA-204ENST00000583361 CCDC9Q9Y3X0 531 aaKnown RBP11.27□□□□□ -0.61
PRKCA-204ENST00000583361 PPIP5K1Q6PFW1 1433 aa11.26□□□□□ -0.61
PRKCA-204ENST00000583361 NBPF8Q3BBV2 869 aa11.26□□□□□ -0.61
PRKCA-204ENST00000583361 FNBP4Q8N3X1 1017 aaPredicted RBP11.26□□□□□ -0.61
PRKCA-204ENST00000583361 PCGF6Q9BYE7 350 aa11.26□□□□□ -0.61
PRKCA-204ENST00000583361 CCDC61Q9Y6R9 512 aa11.26□□□□□ -0.61
PRKCA-204ENST00000583361 RGS12O14924 1447 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms