RNA–Protein interactions for RNA: ENST00000583013.1

KPNB1-213, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-213ENST00000583013 ADGRL3Q9HAR2 1447 aa11.84□□□□□ -0.51
KPNB1-213ENST00000583013 C19orf44Q9H6X5 657 aa11.83□□□□□ -0.52
KPNB1-213ENST00000583013 ROBO2Q9HCK4 1378 aa11.82□□□□□ -0.52
KPNB1-213ENST00000583013 HSPA1LP34931 641 aa11.82□□□□□ -0.52
KPNB1-213ENST00000583013 STAC3Q96MF2 364 aa11.82□□□□□ -0.52
KPNB1-213ENST00000583013 DHX57Q6P158 1386 aaKnown RBP11.81□□□□□ -0.52
KPNB1-213ENST00000583013 C14orf37Q86TY3 774 aa11.81□□□□□ -0.52
KPNB1-213ENST00000583013 CADPS2Q86UW7 1296 aa11.81□□□□□ -0.52
KPNB1-213ENST00000583013 C14orf93Q9H972 538 aaKnown RBP11.81□□□□□ -0.52
KPNB1-213ENST00000583013 LRPPRCP42704 1394 aaKnown RBP11.8□□□□□ -0.52
KPNB1-213ENST00000583013 ADGRB1O14514 1584 aa11.8□□□□□ -0.52
KPNB1-213ENST00000583013 ABCC11Q96J66 1382 aa11.79□□□□□ -0.52
KPNB1-213ENST00000583013 YTHDC2Q9H6S0 1430 aaKnown RBP11.79□□□□□ -0.52
KPNB1-213ENST00000583013 SLAIN2Q9P270 581 aa11.79□□□□□ -0.52
KPNB1-213ENST00000583013 CDC42BPGQ6DT37 1551 aa11.79□□□□□ -0.52
KPNB1-213ENST00000583013 MST1RQ04912 1400 aa11.78□□□□□ -0.52
KPNB1-213ENST00000583013 PHLPP1O60346 1717 aa11.78□□□□□ -0.52
KPNB1-213ENST00000583013 KIAA1210Q9ULL0 1709 aa11.78□□□□□ -0.52
KPNB1-213ENST00000583013 ATF3P18847 181 aa11.78□□□□□ -0.52
KPNB1-213ENST00000583013 MKRN4PQ13434 485 aaPredicted RBP11.78□□□□□ -0.52
KPNB1-213ENST00000583013 AHDC1Q5TGY3 1603 aaPredicted RBP11.78□□□□□ -0.52
KPNB1-213ENST00000583013 DLC1Q96QB1 1528 aa11.77□□□□□ -0.52
KPNB1-213ENST00000583013 CFAP70Q5T0N1 1121 aa11.77□□□□□ -0.53
KPNB1-213ENST00000583013 DCAF11Q8TEB1 546 aa11.77□□□□□ -0.53
KPNB1-213ENST00000583013 COL16A1Q07092 1604 aaPredicted RBP11.76□□□□□ -0.53
KPNB1-213ENST00000583013 NHSL1Q5SYE7 1610 aa11.76□□□□□ -0.53
KPNB1-213ENST00000583013 TMEM132EQ6IEE7 984 aa11.76□□□□□ -0.53
KPNB1-213ENST00000583013 SIRT1Q96EB6 747 aa11.75□□□□□ -0.53
KPNB1-213ENST00000583013 MED1Q15648 1581 aaPredicted RBP11.75□□□□□ -0.53
KPNB1-213ENST00000583013 STK26Q9P289 416 aa11.74□□□□□ -0.53
KPNB1-213ENST00000583013 KDM2AQ9Y2K7 1162 aa11.74□□□□□ -0.53
KPNB1-213ENST00000583013 C1orf167Q5SNV9 1468 aa11.74□□□□□ -0.53
KPNB1-213ENST00000583013 FMN2Q9NZ56 1722 aa11.74□□□□□ -0.53
KPNB1-213ENST00000583013 ADGRB2O60241 1585 aa11.73□□□□□ -0.53
KPNB1-213ENST00000583013 BRINP3Q76B58 766 aa11.73□□□□□ -0.53
KPNB1-213ENST00000583013 ARHGEF28Q8N1W1 1705 aaKnown RBP11.73□□□□□ -0.53
KPNB1-213ENST00000583013 PLEKHH1Q9ULM0 1364 aa11.73□□□□□ -0.53
KPNB1-213ENST00000583013 SHPRHQ149N8 1683 aa11.71□□□□□ -0.53
KPNB1-213ENST00000583013 WAPLQ7Z5K2 1190 aa11.71□□□□□ -0.53
KPNB1-213ENST00000583013 RBM42Q9BTD8 480 aaKnown RBP11.71□□□□□ -0.53
KPNB1-213ENST00000583013 SIN3AQ96ST3 1273 aa11.7□□□□□ -0.54
KPNB1-213ENST00000583013 TRPM1Q7Z4N2 1603 aa11.7□□□□□ -0.54
KPNB1-213ENST00000583013 KIF1AQ12756 1690 aa11.68□□□□□ -0.54
KPNB1-213ENST00000583013 JCADQ9P266 1359 aa11.68□□□□□ -0.54
KPNB1-213ENST00000583013 DISP3Q9P2K9 1392 aa11.68□□□□□ -0.54
KPNB1-213ENST00000583013 L3MBTL2Q969R5 705 aa11.68□□□□□ -0.54
KPNB1-213ENST00000583013 PRAM1Q96QH2 718 aa11.68□□□□□ -0.54
KPNB1-213ENST00000583013 NEUROD1Q13562 356 aa11.66□□□□□ -0.54
KPNB1-213ENST00000583013 TRAK1Q9UPV9 953 aa11.66□□□□□ -0.54
KPNB1-213ENST00000583013 USP32Q8NFA0 1604 aa11.66□□□□□ -0.54
KPNB1-213ENST00000583013 RGPD8O14715 1765 aaPredicted RBP11.66□□□□□ -0.54
KPNB1-213ENST00000583013 ORAI2Q96SN7 254 aa11.65□□□□□ -0.54
KPNB1-213ENST00000583013 POGKQ9P215 609 aa11.65□□□□□ -0.54
KPNB1-213ENST00000583013 ANKARQ7Z5J8 1434 aa11.64□□□□□ -0.55
KPNB1-213ENST00000583013 TULP4Q9NRJ4 1543 aa11.64□□□□□ -0.55
KPNB1-213ENST00000583013 PXDNQ92626 1479 aa11.63□□□□□ -0.55
KPNB1-213ENST00000583013 SOS2Q07890 1332 aaPredicted RBP11.63□□□□□ -0.55
KPNB1-213ENST00000583013 SPATA31A6Q5VVP1 1343 aa11.63□□□□□ -0.55
KPNB1-213ENST00000583013 SAFB2Q14151 953 aaKnown RBP eCLIP11.63□□□□□ -0.55
KPNB1-213ENST00000583013 NBPF1Q3BBV0 1214 aa11.63□□□□□ -0.55
KPNB1-213ENST00000583013 EIF3AQ14152 1382 aaKnown RBP11.63□□□□□ -0.55
KPNB1-213ENST00000583013 COL22A1Q8NFW1 1626 aaPredicted RBP11.63□□□□□ -0.55
KPNB1-213ENST00000583013 ITSN1Q15811 1721 aa11.63□□□□□ -0.55
KPNB1-213ENST00000583013 NPHP3Q7Z494 1330 aa11.62□□□□□ -0.55
KPNB1-213ENST00000583013 QRICH2Q9H0J4 1663 aa11.62□□□□□ -0.55
KPNB1-213ENST00000583013 LRP6O75581 1613 aa11.62□□□□□ -0.55
KPNB1-213ENST00000583013 ESCO1Q5FWF5 840 aa11.62□□□□□ -0.55
KPNB1-213ENST00000583013 LRRC59Q96AG4 307 aaKnown RBP11.62□□□□□ -0.55
KPNB1-213ENST00000583013 TONSLQ96HA7 1378 aa11.62□□□□□ -0.55
KPNB1-213ENST00000583013 DDX17Q92841 729 aaKnown RBP11.61□□□□□ -0.55
KPNB1-213ENST00000583013 GPRASP1Q5JY77 1395 aa11.61□□□□□ -0.55
KPNB1-213ENST00000583013 PNPLA6Q8IY17 1366 aa11.61□□□□□ -0.55
KPNB1-213ENST00000583013 TOPAZ1Q8N9V7 1692 aa11.6□□□□□ -0.55
KPNB1-213ENST00000583013 RALGAPBQ86X10 1494 aa11.6□□□□□ -0.55
KPNB1-213ENST00000583013 NUTM2FA1L443 756 aa11.6□□□□□ -0.55
KPNB1-213ENST00000583013 PCGF6Q9BYE7 350 aa11.6□□□□□ -0.55
KPNB1-213ENST00000583013 MINK1Q8N4C8 1332 aaPredicted RBP11.6□□□□□ -0.55
KPNB1-213ENST00000583013 CLSPNQ9HAW4 1339 aa11.6□□□□□ -0.55
KPNB1-213ENST00000583013 ATP7BP35670 1465 aa11.59□□□□□ -0.55
KPNB1-213ENST00000583013 ROCK2O75116 1388 aaKnown RBP11.59□□□□□ -0.55
KPNB1-213ENST00000583013 WASLO00401 505 aaPredicted RBP11.59□□□□□ -0.55
KPNB1-213ENST00000583013 NBPF8Q3BBV2 869 aa11.59□□□□□ -0.55
KPNB1-213ENST00000583013 HIRIP3Q9BW71 556 aaPredicted RBP11.59□□□□□ -0.55
KPNB1-213ENST00000583013 SPDYE2BA6NHP3 402 aa11.58□□□□□ -0.56
KPNB1-213ENST00000583013 SPDYE6P0CI01 402 aa11.58□□□□□ -0.56
KPNB1-213ENST00000583013 SPDYE2Q495Y8 402 aa11.58□□□□□ -0.56
KPNB1-213ENST00000583013 PHF8Q9UPP1 1060 aa11.58□□□□□ -0.56
KPNB1-213ENST00000583013 PRR36Q9H6K5 1346 aa11.58□□□□□ -0.56
KPNB1-213ENST00000583013 CENPJQ9HC77 1338 aaPredicted RBP11.58□□□□□ -0.56
KPNB1-213ENST00000583013 TRPM3Q9HCF6 1732 aaPredicted RBP11.57□□□□□ -0.56
KPNB1-213ENST00000583013 FOXO3O43524 673 aa11.57□□□□□ -0.56
KPNB1-213ENST00000583013 ILDR2Q71H61 639 aa11.56□□□□□ -0.56
KPNB1-213ENST00000583013 MARF1Q9Y4F3 1742 aaKnown RBP11.55□□□□□ -0.56
KPNB1-213ENST00000583013 TNS3Q68CZ2 1445 aa11.55□□□□□ -0.56
KPNB1-213ENST00000583013 RGS17Q9UGC6 210 aaPredicted RBP11.55□□□□□ -0.56
KPNB1-213ENST00000583013 SBNO1A3KN83 1393 aa11.54□□□□□ -0.56
KPNB1-213ENST00000583013 AKT1S1Q96B36 256 aa11.54□□□□□ -0.56
KPNB1-213ENST00000583013 ALS2Q96Q42 1657 aa11.54□□□□□ -0.56
KPNB1-213ENST00000583013 ABCA3Q99758 1704 aa11.54□□□□□ -0.56
KPNB1-213ENST00000583013 SPATA31A3Q5VYP0 1347 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms