RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 SRCAPQ6ZRS2 3230 aa20.43■□□□□ 0.86
SS18-222ENST00000582792 FNBP4Q8N3X1 1017 aaPredicted RBP20.43■□□□□ 0.86
SS18-222ENST00000582792 TRPC5Q9UL62 973 aaPredicted RBP20.42■□□□□ 0.86
SS18-222ENST00000582792 NPHP3Q7Z494 1330 aa20.41■□□□□ 0.86
SS18-222ENST00000582792 MYOM2P54296 1465 aa20.41■□□□□ 0.86
SS18-222ENST00000582792 ATRNO75882 1429 aa20.4■□□□□ 0.86
SS18-222ENST00000582792 ESCO1Q5FWF5 840 aa20.4■□□□□ 0.86
SS18-222ENST00000582792 ATAD2Q6PL18 1390 aa20.4■□□□□ 0.86
SS18-222ENST00000582792 PXDNQ92626 1479 aa20.4■□□□□ 0.86
SS18-222ENST00000582792 EP400Q96L91 3159 aa20.4■□□□□ 0.86
SS18-222ENST00000582792 ADGRF5Q8IZF2 1346 aa20.38■□□□□ 0.85
SS18-222ENST00000582792 TECPR2O15040 1411 aa20.37■□□□□ 0.85
SS18-222ENST00000582792 FOXD1Q16676 465 aa20.37■□□□□ 0.85
SS18-222ENST00000582792 MARF1Q9Y4F3 1742 aaKnown RBP20.36■□□□□ 0.85
SS18-222ENST00000582792 CCDC144AA2RUR9 1427 aa20.36■□□□□ 0.85
SS18-222ENST00000582792 FOXO3O43524 673 aa20.35■□□□□ 0.85
SS18-222ENST00000582792 IFT172Q9UG01 1749 aa20.35■□□□□ 0.85
SS18-222ENST00000582792 SPATA31E1Q6ZUB1 1445 aa20.35■□□□□ 0.85
SS18-222ENST00000582792 LRPPRCP42704 1394 aaKnown RBP20.34■□□□□ 0.85
SS18-222ENST00000582792 BCL9LQ86UU0 1499 aa20.34■□□□□ 0.85
SS18-222ENST00000582792 ANKRD30BQ9BXX2 1392 aa20.34■□□□□ 0.85
SS18-222ENST00000582792 KNDC1Q76NI1 1749 aa20.33■□□□□ 0.85
SS18-222ENST00000582792 XPCQ01831 940 aaPredicted RBP20.33■□□□□ 0.85
SS18-222ENST00000582792 WAPLQ7Z5K2 1190 aa20.33■□□□□ 0.85
SS18-222ENST00000582792 STK26Q9P289 416 aa20.33■□□□□ 0.85
SS18-222ENST00000582792 RGL3Q3MIN7 710 aa20.32■□□□□ 0.84
SS18-222ENST00000582792 ABCC11Q96J66 1382 aa20.32■□□□□ 0.84
SS18-222ENST00000582792 NUTM2FA1L443 756 aa20.31■□□□□ 0.84
SS18-222ENST00000582792 PIK3C2GO75747 1445 aa20.3■□□□□ 0.84
SS18-222ENST00000582792 PLEKHH1Q9ULM0 1364 aa20.3■□□□□ 0.84
SS18-222ENST00000582792 FMN2Q9NZ56 1722 aa20.3■□□□□ 0.84
SS18-222ENST00000582792 KIF1AQ12756 1690 aa20.29■□□□□ 0.84
SS18-222ENST00000582792 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.28■□□□□ 0.84
SS18-222ENST00000582792 TMEM132EQ6IEE7 984 aa20.28■□□□□ 0.84
SS18-222ENST00000582792 GJD4Q96KN9 370 aaPredicted RBP20.28■□□□□ 0.84
SS18-222ENST00000582792 MPHOSPH9Q99550 1183 aa20.27■□□□□ 0.84
SS18-222ENST00000582792 YTHDC2Q9H6S0 1430 aaKnown RBP20.27■□□□□ 0.83
SS18-222ENST00000582792 SPATA31A3Q5VYP0 1347 aa20.27■□□□□ 0.83
SS18-222ENST00000582792 CCDC125Q86Z20 511 aa20.26■□□□□ 0.83
SS18-222ENST00000582792 SLIT2O94813 1529 aa20.25■□□□□ 0.83
SS18-222ENST00000582792 SIRT1Q96EB6 747 aa20.24■□□□□ 0.83
SS18-222ENST00000582792 UNC5CLQ8IV45 518 aa20.23■□□□□ 0.83
SS18-222ENST00000582792 ZRANB1Q9UGI0 708 aa20.23■□□□□ 0.83
SS18-222ENST00000582792 USP32Q8NFA0 1604 aa20.23■□□□□ 0.83
SS18-222ENST00000582792 GLI3P10071 1580 aa20.22■□□□□ 0.83
SS18-222ENST00000582792 KRT28Q7Z3Y7 464 aa20.22■□□□□ 0.83
SS18-222ENST00000582792 RALGAPBQ86X10 1494 aa20.22■□□□□ 0.83
SS18-222ENST00000582792 C14orf93Q9H972 538 aaKnown RBP20.2■□□□□ 0.82
SS18-222ENST00000582792 TNS3Q68CZ2 1445 aa20.19■□□□□ 0.82
SS18-222ENST00000582792 NRXN1Q9ULB1 1477 aa20.19■□□□□ 0.82
SS18-222ENST00000582792 RGPD8O14715 1765 aaPredicted RBP20.19■□□□□ 0.82
SS18-222ENST00000582792 PHF8Q9UPP1 1060 aa20.18■□□□□ 0.82
SS18-222ENST00000582792 PSME1Q06323 249 aa20.17■□□□□ 0.82
SS18-222ENST00000582792 DHX57Q6P158 1386 aaKnown RBP20.17■□□□□ 0.82
SS18-222ENST00000582792 CFAP70Q5T0N1 1121 aa20.16■□□□□ 0.82
SS18-222ENST00000582792 BLMP54132 1417 aaPredicted RBP20.16■□□□□ 0.82
SS18-222ENST00000582792 HAP1P54257 671 aaPredicted RBP20.15■□□□□ 0.82
SS18-222ENST00000582792 ACIN1Q9UKV3 1341 aaKnown RBP20.15■□□□□ 0.82
SS18-222ENST00000582792 SBNO1A3KN83 1393 aa20.15■□□□□ 0.82
SS18-222ENST00000582792 BRWD3Q6RI45 1802 aa20.15■□□□□ 0.82
SS18-222ENST00000582792 NWD2Q9ULI1 1742 aa20.14■□□□□ 0.81
SS18-222ENST00000582792 PLCH1Q4KWH8 1693 aa20.14■□□□□ 0.81
SS18-222ENST00000582792 CABLES1Q8TDN4 633 aa20.14■□□□□ 0.81
SS18-222ENST00000582792 ABCA3Q99758 1704 aa20.13■□□□□ 0.81
SS18-222ENST00000582792 VPS72Q15906 364 aa20.13■□□□□ 0.81
SS18-222ENST00000582792 PRAM1Q96QH2 718 aa20.13■□□□□ 0.81
SS18-222ENST00000582792 ARHGEF10O15013 1369 aa20.12■□□□□ 0.81
SS18-222ENST00000582792 DLC1Q96QB1 1528 aa20.12■□□□□ 0.81
SS18-222ENST00000582792 ANKARQ7Z5J8 1434 aa20.11■□□□□ 0.81
SS18-222ENST00000582792 SAFB2Q14151 953 aaKnown RBP eCLIP20.11■□□□□ 0.81
SS18-222ENST00000582792 SEPT12Q8IYM1 358 aa20.11■□□□□ 0.81
SS18-222ENST00000582792 ONECUT3O60422 494 aaPredicted RBP20.1■□□□□ 0.81
SS18-222ENST00000582792 ADGRB2O60241 1585 aa20.09■□□□□ 0.81
SS18-222ENST00000582792 LMOD2Q6P5Q4 547 aa20.09■□□□□ 0.81
SS18-222ENST00000582792 PLEKHG5O94827 1062 aa20.08■□□□□ 0.81
SS18-222ENST00000582792 POGKQ9P215 609 aa20.08■□□□□ 0.81
SS18-222ENST00000582792 DEFB132Q7Z7B7 95 aa20.07■□□□□ 0.8
SS18-222ENST00000582792 PMFBP1Q8TBY8 1022 aa20.07■□□□□ 0.8
SS18-222ENST00000582792 CCDC9Q9Y3X0 531 aaKnown RBP20.07■□□□□ 0.8
SS18-222ENST00000582792 ADGRB1O14514 1584 aa20.07■□□□□ 0.8
SS18-222ENST00000582792 FAM83GA6ND36 823 aa20.06■□□□□ 0.8
SS18-222ENST00000582792 SF3B2Q13435 895 aaKnown RBP20.06■□□□□ 0.8
SS18-222ENST00000582792 TRPM3Q9HCF6 1732 aaPredicted RBP20.06■□□□□ 0.8
SS18-222ENST00000582792 KRT27Q7Z3Y8 459 aa20.05■□□□□ 0.8
SS18-222ENST00000582792 NRAPQ86VF7 1730 aa20.04■□□□□ 0.8
SS18-222ENST00000582792 ALS2Q96Q42 1657 aa20.03■□□□□ 0.8
SS18-222ENST00000582792 EIF3AQ14152 1382 aaKnown RBP20.02■□□□□ 0.8
SS18-222ENST00000582792 GPRASP1Q5JY77 1395 aa20.01■□□□□ 0.79
SS18-222ENST00000582792 HIRIP3Q9BW71 556 aaPredicted RBP20.01■□□□□ 0.79
SS18-222ENST00000582792 TRAK1Q9UPV9 953 aa20.01■□□□□ 0.79
SS18-222ENST00000582792 TULP4Q9NRJ4 1543 aa20.01■□□□□ 0.79
SS18-222ENST00000582792 COL14A1Q05707 1796 aaKnown RBP20■□□□□ 0.79
SS18-222ENST00000582792 BTG4Q9NY30 223 aa20■□□□□ 0.79
SS18-222ENST00000582792 PRR36Q9H6K5 1346 aa20■□□□□ 0.79
SS18-222ENST00000582792 RAB3GAP2Q9H2M9 1393 aa19.99■□□□□ 0.79
SS18-222ENST00000582792 MINK1Q8N4C8 1332 aaPredicted RBP19.99■□□□□ 0.79
SS18-222ENST00000582792 A0A0G2JS52 829 aa19.98■□□□□ 0.79
SS18-222ENST00000582792 MYT1Q01538 1121 aa19.98■□□□□ 0.79
SS18-222ENST00000582792 FAM98CQ17RN3 349 aaKnown RBP19.98■□□□□ 0.79
SS18-222ENST00000582792 CRYBG1Q9Y4K1 1723 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms