RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 TMEM132EQ6IEE7 984 aa32.87■■■□□ 2.85
CASC3-207ENST00000581849 STK26Q9P289 416 aa32.87■■■□□ 2.85
CASC3-207ENST00000581849 MEX3CQ5U5Q3 659 aaKnown RBP32.86■■■□□ 2.85
CASC3-207ENST00000581849 PNPLA6Q8IY17 1366 aa32.84■■■□□ 2.85
CASC3-207ENST00000581849 SOS2Q07890 1332 aaPredicted RBP32.84■■■□□ 2.85
CASC3-207ENST00000581849 ORAI2Q96SN7 254 aa32.84■■■□□ 2.85
CASC3-207ENST00000581849 STAC3Q96MF2 364 aa32.83■■■□□ 2.85
CASC3-207ENST00000581849 DHX57Q6P158 1386 aaKnown RBP32.83■■■□□ 2.85
CASC3-207ENST00000581849 ZNF772Q68DY9 489 aaPredicted RBP32.82■■■□□ 2.84
CASC3-207ENST00000581849 WAPLQ7Z5K2 1190 aa32.82■■■□□ 2.84
CASC3-207ENST00000581849 DDX17Q92841 729 aaKnown RBP32.82■■■□□ 2.84
CASC3-207ENST00000581849 CFAP70Q5T0N1 1121 aa32.8■■■□□ 2.84
CASC3-207ENST00000581849 PLEKHH1Q9ULM0 1364 aa32.8■■■□□ 2.84
CASC3-207ENST00000581849 FMN2Q9NZ56 1722 aa32.77■■■□□ 2.84
CASC3-207ENST00000581849 DLC1Q96QB1 1528 aa32.77■■■□□ 2.84
CASC3-207ENST00000581849 NPHP3Q7Z494 1330 aa32.77■■■□□ 2.84
CASC3-207ENST00000581849 NUTM2BA6NNL0 878 aaPredicted RBP32.76■■■□□ 2.83
CASC3-207ENST00000581849 NUTM2EB1AL46 878 aaPredicted RBP32.76■■■□□ 2.83
CASC3-207ENST00000581849 NUTM2AQ8IVF1 878 aaPredicted RBP32.76■■■□□ 2.83
CASC3-207ENST00000581849 ESCO1Q5FWF5 840 aa32.74■■■□□ 2.83
CASC3-207ENST00000581849 ADGRB1O14514 1584 aa32.73■■■□□ 2.83
CASC3-207ENST00000581849 COL22A1Q8NFW1 1626 aaPredicted RBP32.71■■■□□ 2.83
CASC3-207ENST00000581849 PXDNQ92626 1479 aa32.7■■■□□ 2.83
CASC3-207ENST00000581849 KIF1AQ12756 1690 aa32.69■■■□□ 2.82
CASC3-207ENST00000581849 DCAF11Q8TEB1 546 aa32.68■■■□□ 2.82
CASC3-207ENST00000581849 PRAM1Q96QH2 718 aa32.65■■■□□ 2.82
CASC3-207ENST00000581849 AFF2P51816 1311 aa32.65■■■□□ 2.82
CASC3-207ENST00000581849 ADGRB2O60241 1585 aa32.64■■■□□ 2.82
CASC3-207ENST00000581849 FOXO3O43524 673 aa32.63■■■□□ 2.81
CASC3-207ENST00000581849 KDM2AQ9Y2K7 1162 aa32.62■■■□□ 2.81
CASC3-207ENST00000581849 CDK12Q9NYV4 1490 aaPredicted RBP32.61■■■□□ 2.81
CASC3-207ENST00000581849 NUTM2FA1L443 756 aa32.61■■■□□ 2.81
CASC3-207ENST00000581849 C8orf37Q96NL8 207 aa32.6■■■□□ 2.81
CASC3-207ENST00000581849 POGKQ9P215 609 aa32.6■■■□□ 2.81
CASC3-207ENST00000581849 RXRBP28702 533 aa32.58■■■□□ 2.81
CASC3-207ENST00000581849 ANKARQ7Z5J8 1434 aa32.58■■■□□ 2.81
CASC3-207ENST00000581849 RGPD8O14715 1765 aaPredicted RBP32.55■■■□□ 2.8
CASC3-207ENST00000581849 ADAMTS2O95450 1211 aa32.55■■■□□ 2.8
CASC3-207ENST00000581849 TRAK1Q9UPV9 953 aa32.54■■■□□ 2.8
CASC3-207ENST00000581849 SAFB2Q14151 953 aaKnown RBP eCLIP32.53■■■□□ 2.8
CASC3-207ENST00000581849 NGLY1Q96IV0 654 aa32.53■■■□□ 2.8
CASC3-207ENST00000581849 PHF8Q9UPP1 1060 aa32.53■■■□□ 2.8
CASC3-207ENST00000581849 EIF3AQ14152 1382 aaKnown RBP32.53■■■□□ 2.8
CASC3-207ENST00000581849 KIAA1210Q9ULL0 1709 aa32.52■■■□□ 2.8
CASC3-207ENST00000581849 XPCQ01831 940 aaPredicted RBP32.52■■■□□ 2.8
CASC3-207ENST00000581849 SPATA31A3Q5VYP0 1347 aa32.51■■■□□ 2.79
CASC3-207ENST00000581849 MARF1Q9Y4F3 1742 aaKnown RBP32.49■■■□□ 2.79
CASC3-207ENST00000581849 USP32Q8NFA0 1604 aa32.49■■■□□ 2.79
CASC3-207ENST00000581849 FNBP4Q8N3X1 1017 aaPredicted RBP32.49■■■□□ 2.79
CASC3-207ENST00000581849 RBM6P78332 1123 aaKnown RBP32.48■■■□□ 2.79
CASC3-207ENST00000581849 KRT28Q7Z3Y7 464 aa32.48■■■□□ 2.79
CASC3-207ENST00000581849 QTRT2Q9H974 415 aaKnown RBP32.48■■■□□ 2.79
CASC3-207ENST00000581849 ARHGEF28Q8N1W1 1705 aaKnown RBP32.48■■■□□ 2.79
CASC3-207ENST00000581849 PSME1Q06323 249 aa32.47■■■□□ 2.79
CASC3-207ENST00000581849 SBNO1A3KN83 1393 aa32.45■■■□□ 2.79
CASC3-207ENST00000581849 TNS3Q68CZ2 1445 aa32.45■■■□□ 2.79
CASC3-207ENST00000581849 TULP4Q9NRJ4 1543 aa32.45■■■□□ 2.78
CASC3-207ENST00000581849 USP21Q9UK80 565 aa32.43■■■□□ 2.78
CASC3-207ENST00000581849 MINK1Q8N4C8 1332 aaPredicted RBP32.42■■■□□ 2.78
CASC3-207ENST00000581849 WASLO00401 505 aaPredicted RBP32.41■■■□□ 2.78
CASC3-207ENST00000581849 TRPC5Q9UL62 973 aaPredicted RBP32.41■■■□□ 2.78
CASC3-207ENST00000581849 HIRIP3Q9BW71 556 aaPredicted RBP32.39■■■□□ 2.78
CASC3-207ENST00000581849 RGS12O14924 1447 aa32.39■■■□□ 2.78
CASC3-207ENST00000581849 ATRNO75882 1429 aa32.38■■■□□ 2.77
CASC3-207ENST00000581849 ARHGEF10O15013 1369 aa32.38■■■□□ 2.77
CASC3-207ENST00000581849 PRR36Q9H6K5 1346 aa32.36■■■□□ 2.77
CASC3-207ENST00000581849 BCL9LQ86UU0 1499 aa32.35■■■□□ 2.77
CASC3-207ENST00000581849 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.34■■■□□ 2.77
CASC3-207ENST00000581849 PMFBP1Q8TBY8 1022 aa32.33■■■□□ 2.77
CASC3-207ENST00000581849 ITSN1Q15811 1721 aa32.33■■■□□ 2.77
CASC3-207ENST00000581849 TRPM3Q9HCF6 1732 aaPredicted RBP32.33■■■□□ 2.77
CASC3-207ENST00000581849 UPF1Q92900 1129 aaKnown RBP eCLIP32.32■■■□□ 2.76
CASC3-207ENST00000581849 GPRASP1Q5JY77 1395 aa32.32■■■□□ 2.76
CASC3-207ENST00000581849 SLIT2O94813 1529 aa32.31■■■□□ 2.76
CASC3-207ENST00000581849 ATP7BP35670 1465 aa32.3■■■□□ 2.76
CASC3-207ENST00000581849 ABCA3Q99758 1704 aa32.29■■■□□ 2.76
CASC3-207ENST00000581849 ALS2Q96Q42 1657 aa32.27■■■□□ 2.76
CASC3-207ENST00000581849 NBPF1Q3BBV0 1214 aa32.26■■■□□ 2.75
CASC3-207ENST00000581849 HAP1P54257 671 aaPredicted RBP32.25■■■□□ 2.75
CASC3-207ENST00000581849 UNC5CLQ8IV45 518 aa32.24■■■□□ 2.75
CASC3-207ENST00000581849 L3MBTL2Q969R5 705 aa32.24■■■□□ 2.75
CASC3-207ENST00000581849 LMOD2Q6P5Q4 547 aa32.23■■■□□ 2.75
CASC3-207ENST00000581849 NUDT16Q96DE0 195 aaKnown RBP32.23■■■□□ 2.75
CASC3-207ENST00000581849 NGDNQ8NEJ9 315 aaKnown RBP32.22■■■□□ 2.75
CASC3-207ENST00000581849 NWD2Q9ULI1 1742 aa32.22■■■□□ 2.75
CASC3-207ENST00000581849 TOPAZ1Q8N9V7 1692 aa32.21■■■□□ 2.75
CASC3-207ENST00000581849 GJD4Q96KN9 370 aaPredicted RBP32.21■■■□□ 2.75
CASC3-207ENST00000581849 CDK19Q9BWU1 502 aa32.21■■■□□ 2.75
CASC3-207ENST00000581849 CABLES1Q8TDN4 633 aa32.2■■■□□ 2.75
CASC3-207ENST00000581849 CENPJQ9HC77 1338 aaPredicted RBP32.18■■■□□ 2.74
CASC3-207ENST00000581849 ATAD2Q6PL18 1390 aa32.18■■■□□ 2.74
CASC3-207ENST00000581849 PLCH1Q4KWH8 1693 aa32.18■■■□□ 2.74
CASC3-207ENST00000581849 SIN3AQ96ST3 1273 aa32.17■■■□□ 2.74
CASC3-207ENST00000581849 CCDC61Q9Y6R9 512 aa32.17■■■□□ 2.74
CASC3-207ENST00000581849 POLR3AO14802 1390 aaPredicted RBP32.17■■■□□ 2.74
CASC3-207ENST00000581849 TRPM1Q7Z4N2 1603 aa32.16■■■□□ 2.74
CASC3-207ENST00000581849 RALGAPBQ86X10 1494 aa32.15■■■□□ 2.74
CASC3-207ENST00000581849 GLI3P10071 1580 aa32.14■■■□□ 2.74
CASC3-207ENST00000581849 CRYBG1Q9Y4K1 1723 aa32.14■■■□□ 2.74
CASC3-207ENST00000581849 PLEKHG3A1L390 1219 aa32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms