RNA–Protein interactions for RNA: ENST00000581709.1

RTTN-208, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-208ENST00000581709 STRCP1A6NGW2 1772 aa12.59□□□□□ -0.39
RTTN-208ENST00000581709 ASXL1Q8IXJ9 1541 aa12.59□□□□□ -0.39
RTTN-208ENST00000581709 HIRIP3Q9BW71 556 aaPredicted RBP12.59□□□□□ -0.39
RTTN-208ENST00000581709 ADGRL3Q9HAR2 1447 aa12.59□□□□□ -0.39
RTTN-208ENST00000581709 DLC1Q96QB1 1528 aa12.58□□□□□ -0.4
RTTN-208ENST00000581709 SETD1AO15047 1707 aaKnown RBP12.58□□□□□ -0.4
RTTN-208ENST00000581709 XRN1Q8IZH2 1706 aaKnown RBP12.58□□□□□ -0.4
RTTN-208ENST00000581709 DCCP43146 1447 aa12.57□□□□□ -0.4
RTTN-208ENST00000581709 WASLO00401 505 aaPredicted RBP12.57□□□□□ -0.4
RTTN-208ENST00000581709 RALGAPBQ86X10 1494 aa12.57□□□□□ -0.4
RTTN-208ENST00000581709 KIAA1210Q9ULL0 1709 aa12.57□□□□□ -0.4
RTTN-208ENST00000581709 ST20-MTHFSA0A0A6YYL1 179 aa12.56□□□□□ -0.4
RTTN-208ENST00000581709 NUTM2FA1L443 756 aa12.56□□□□□ -0.4
RTTN-208ENST00000581709 ADRA2BP18089 450 aa12.56□□□□□ -0.4
RTTN-208ENST00000581709 ESCO1Q5FWF5 840 aa12.56□□□□□ -0.4
RTTN-208ENST00000581709 CDK19Q9BWU1 502 aa12.56□□□□□ -0.4
RTTN-208ENST00000581709 ZEB1P37275 1124 aaPredicted RBP12.55□□□□□ -0.4
RTTN-208ENST00000581709 EVC2Q86UK5 1308 aa12.55□□□□□ -0.4
RTTN-208ENST00000581709 EIF4G2P78344 907 aaKnown RBP eCLIP12.54□□□□□ -0.4
RTTN-208ENST00000581709 SRPK2P78362 688 aaKnown RBP12.54□□□□□ -0.4
RTTN-208ENST00000581709 TRPM1Q7Z4N2 1603 aa12.53□□□□□ -0.4
RTTN-208ENST00000581709 BRINP3Q76B58 766 aa12.53□□□□□ -0.4
RTTN-208ENST00000581709 ILDR1Q86SU0 546 aaPredicted RBP12.53□□□□□ -0.4
RTTN-208ENST00000581709 ORAI2Q96SN7 254 aa12.53□□□□□ -0.4
RTTN-208ENST00000581709 NUDT16Q96DE0 195 aaKnown RBP12.52□□□□□ -0.41
RTTN-208ENST00000581709 USP47Q96K76 1375 aa12.52□□□□□ -0.41
RTTN-208ENST00000581709 CABP2Q9NPB3 220 aa12.51□□□□□ -0.41
RTTN-208ENST00000581709 CCDC61Q9Y6R9 512 aa12.51□□□□□ -0.41
RTTN-208ENST00000581709 MST1RQ04912 1400 aa12.51□□□□□ -0.41
RTTN-208ENST00000581709 C1orf167Q5SNV9 1468 aa12.51□□□□□ -0.41
RTTN-208ENST00000581709 TMF1P82094 1093 aa12.5□□□□□ -0.41
RTTN-208ENST00000581709 PHF8Q9UPP1 1060 aa12.5□□□□□ -0.41
RTTN-208ENST00000581709 KNDC1Q76NI1 1749 aa12.5□□□□□ -0.41
RTTN-208ENST00000581709 FOXO3O43524 673 aa12.49□□□□□ -0.41
RTTN-208ENST00000581709 HSPA5P11021 654 aaKnown RBP12.49□□□□□ -0.41
RTTN-208ENST00000581709 HSPA1LP34931 641 aa12.49□□□□□ -0.41
RTTN-208ENST00000581709 PSME1Q06323 249 aa12.49□□□□□ -0.41
RTTN-208ENST00000581709 CDCA8Q53HL2 280 aa12.49□□□□□ -0.41
RTTN-208ENST00000581709 PUS7Q96PZ0 661 aaKnown RBP12.49□□□□□ -0.41
RTTN-208ENST00000581709 TESK2Q96S53 571 aa12.49□□□□□ -0.41
RTTN-208ENST00000581709 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.48□□□□□ -0.41
RTTN-208ENST00000581709 SBNO2Q9Y2G9 1366 aa12.48□□□□□ -0.41
RTTN-208ENST00000581709 NGDNQ8NEJ9 315 aaKnown RBP12.48□□□□□ -0.41
RTTN-208ENST00000581709 PMFBP1Q8TBY8 1022 aa12.48□□□□□ -0.41
RTTN-208ENST00000581709 ANKARQ7Z5J8 1434 aa12.47□□□□□ -0.41
RTTN-208ENST00000581709 NPHP3Q7Z494 1330 aa12.47□□□□□ -0.41
RTTN-208ENST00000581709 XIRP1Q702N8 1843 aaKnown RBP12.47□□□□□ -0.41
RTTN-208ENST00000581709 PRR36Q9H6K5 1346 aa12.46□□□□□ -0.41
RTTN-208ENST00000581709 PLEKHG3A1L390 1219 aa12.46□□□□□ -0.41
RTTN-208ENST00000581709 LRRC59Q96AG4 307 aaKnown RBP12.46□□□□□ -0.41
RTTN-208ENST00000581709 CABP1Q9NZU7 370 aa12.46□□□□□ -0.41
RTTN-208ENST00000581709 CDC42BPGQ6DT37 1551 aa12.46□□□□□ -0.42
RTTN-208ENST00000581709 KRT28Q7Z3Y7 464 aa12.45□□□□□ -0.42
RTTN-208ENST00000581709 DDX17Q92841 729 aaKnown RBP12.45□□□□□ -0.42
RTTN-208ENST00000581709 TMC1Q8TDI8 760 aa12.44□□□□□ -0.42
RTTN-208ENST00000581709 ZNF692Q9BU19 519 aaPredicted RBP12.44□□□□□ -0.42
RTTN-208ENST00000581709 NALCNQ8IZF0 1738 aa12.44□□□□□ -0.42
RTTN-208ENST00000581709 ATAD2Q6PL18 1390 aa12.43□□□□□ -0.42
RTTN-208ENST00000581709 ARHGEF28Q8N1W1 1705 aaKnown RBP12.43□□□□□ -0.42
RTTN-208ENST00000581709 ACEP12821 1306 aa12.42□□□□□ -0.42
RTTN-208ENST00000581709 SOS2Q07890 1332 aaPredicted RBP12.42□□□□□ -0.42
RTTN-208ENST00000581709 XPCQ01831 940 aaPredicted RBP12.42□□□□□ -0.42
RTTN-208ENST00000581709 ADGRB2O60241 1585 aa12.42□□□□□ -0.42
RTTN-208ENST00000581709 TULP4Q9NRJ4 1543 aa12.42□□□□□ -0.42
RTTN-208ENST00000581709 PAK3O75914 559 aaPredicted RBP12.41□□□□□ -0.42
RTTN-208ENST00000581709 POLR3GLQ9BT43 218 aa12.41□□□□□ -0.42
RTTN-208ENST00000581709 SLC12A5Q9H2X9 1139 aa12.41□□□□□ -0.42
RTTN-208ENST00000581709 TERF2IPQ9NYB0 399 aa12.41□□□□□ -0.42
RTTN-208ENST00000581709 PPIP5K1Q6PFW1 1433 aa12.4□□□□□ -0.42
RTTN-208ENST00000581709 LMOD2Q6P5Q4 547 aa12.4□□□□□ -0.42
RTTN-208ENST00000581709 HDGFL2Q7Z4V5 671 aaPredicted RBP12.4□□□□□ -0.42
RTTN-208ENST00000581709 DISP3Q9P2K9 1392 aa12.39□□□□□ -0.43
RTTN-208ENST00000581709 ROBO1Q9Y6N7 1651 aa12.38□□□□□ -0.43
RTTN-208ENST00000581709 POLR3AO14802 1390 aaPredicted RBP12.38□□□□□ -0.43
RTTN-208ENST00000581709 ATP7BP35670 1465 aa12.38□□□□□ -0.43
RTTN-208ENST00000581709 QRICH2Q9H0J4 1663 aa12.38□□□□□ -0.43
RTTN-208ENST00000581709 FMN2Q9NZ56 1722 aa12.37□□□□□ -0.43
RTTN-208ENST00000581709 JCADQ9P266 1359 aa12.37□□□□□ -0.43
RTTN-208ENST00000581709 NINLQ9Y2I6 1382 aa12.37□□□□□ -0.43
RTTN-208ENST00000581709 SPATA31A3Q5VYP0 1347 aa12.37□□□□□ -0.43
RTTN-208ENST00000581709 SBNO1A3KN83 1393 aa12.36□□□□□ -0.43
RTTN-208ENST00000581709 BRD4O60885 1362 aaPredicted RBP12.35□□□□□ -0.43
RTTN-208ENST00000581709 C11orf95C9JLR9 678 aaPredicted RBP12.35□□□□□ -0.43
RTTN-208ENST00000581709 ABTB2Q8N961 1025 aa12.35□□□□□ -0.43
RTTN-208ENST00000581709 SPATA31A6Q5VVP1 1343 aa12.35□□□□□ -0.43
RTTN-208ENST00000581709 AHDC1Q5TGY3 1603 aaPredicted RBP12.34□□□□□ -0.43
RTTN-208ENST00000581709 KTN1Q86UP2 1357 aaKnown RBP12.34□□□□□ -0.43
RTTN-208ENST00000581709 NUTM2BA6NNL0 878 aaPredicted RBP12.34□□□□□ -0.43
RTTN-208ENST00000581709 NUTM2EB1AL46 878 aaPredicted RBP12.34□□□□□ -0.43
RTTN-208ENST00000581709 HAP1P54257 671 aaPredicted RBP12.34□□□□□ -0.43
RTTN-208ENST00000581709 NUTM2AQ8IVF1 878 aaPredicted RBP12.34□□□□□ -0.43
RTTN-208ENST00000581709 ARHGEF10O15013 1369 aa12.33□□□□□ -0.44
RTTN-208ENST00000581709 NLRP13Q86W25 1043 aa12.33□□□□□ -0.44
RTTN-208ENST00000581709 PXDNQ92626 1479 aa12.33□□□□□ -0.44
RTTN-208ENST00000581709 PLEKHG5O94827 1062 aa12.32□□□□□ -0.44
RTTN-208ENST00000581709 NLRP6P59044 892 aa12.32□□□□□ -0.44
RTTN-208ENST00000581709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.32□□□□□ -0.44
RTTN-208ENST00000581709 USP32Q8NFA0 1604 aa12.32□□□□□ -0.44
RTTN-208ENST00000581709 KIF7Q2M1P5 1343 aa12.32□□□□□ -0.44
RTTN-208ENST00000581709 TTC21BQ7Z4L5 1316 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms