RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 MBD5Q9P267 1494 aa13□□□□□ -0.33
CDK5RAP3-221ENST00000581662 YY1P25490 414 aa13□□□□□ -0.33
CDK5RAP3-221ENST00000581662 OTUD5Q96G74 571 aa13□□□□□ -0.33
CDK5RAP3-221ENST00000581662 BCL9LQ86UU0 1499 aa12.99□□□□□ -0.33
CDK5RAP3-221ENST00000581662 TMEM2Q9UHN6 1383 aa12.99□□□□□ -0.33
CDK5RAP3-221ENST00000581662 IER5LQ5T953 404 aa12.99□□□□□ -0.33
CDK5RAP3-221ENST00000581662 NGLY1Q96IV0 654 aa12.99□□□□□ -0.33
CDK5RAP3-221ENST00000581662 MAST1Q9Y2H9 1570 aa12.98□□□□□ -0.33
CDK5RAP3-221ENST00000581662 CCDC18Q5T9S5 1454 aa12.97□□□□□ -0.33
CDK5RAP3-221ENST00000581662 SETD5Q9C0A6 1442 aa12.97□□□□□ -0.33
CDK5RAP3-221ENST00000581662 C8orf37Q96NL8 207 aa12.97□□□□□ -0.33
CDK5RAP3-221ENST00000581662 COLQQ9Y215 455 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-221ENST00000581662 EID1Q9Y6B2 187 aa12.97□□□□□ -0.33
CDK5RAP3-221ENST00000581662 MAMSTRQ6ZN01 415 aa12.96□□□□□ -0.33
CDK5RAP3-221ENST00000581662 POTEFA5A3E0 1075 aa12.95□□□□□ -0.34
CDK5RAP3-221ENST00000581662 BLMP54132 1417 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-221ENST00000581662 NCOA3Q9Y6Q9 1424 aa12.95□□□□□ -0.34
CDK5RAP3-221ENST00000581662 PSEN1P49768 467 aa12.94□□□□□ -0.34
CDK5RAP3-221ENST00000581662 CFDP1Q9UEE9 299 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-221ENST00000581662 POTEJP0CG39 1038 aa12.93□□□□□ -0.34
CDK5RAP3-221ENST00000581662 PLCG2P16885 1265 aa12.93□□□□□ -0.34
CDK5RAP3-221ENST00000581662 HRCP23327 699 aa12.93□□□□□ -0.34
CDK5RAP3-221ENST00000581662 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
CDK5RAP3-221ENST00000581662 SLC26A8Q96RN1 970 aa12.93□□□□□ -0.34
CDK5RAP3-221ENST00000581662 SCUBE2Q9NQ36 999 aa12.93□□□□□ -0.34
CDK5RAP3-221ENST00000581662 ATRNO75882 1429 aa12.92□□□□□ -0.34
CDK5RAP3-221ENST00000581662 EEA1Q15075 1411 aa12.92□□□□□ -0.34
CDK5RAP3-221ENST00000581662 BRINP3Q76B58 766 aa12.91□□□□□ -0.34
CDK5RAP3-221ENST00000581662 PNPLA6Q8IY17 1366 aa12.91□□□□□ -0.34
CDK5RAP3-221ENST00000581662 MROH1Q8NDA8 1641 aa12.91□□□□□ -0.34
CDK5RAP3-221ENST00000581662 CASKIN1Q8WXD9 1431 aa12.9□□□□□ -0.34
CDK5RAP3-221ENST00000581662 PDAP1Q13442 181 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-221ENST00000581662 DEFB132Q7Z7B7 95 aa12.9□□□□□ -0.34
CDK5RAP3-221ENST00000581662 ZNF644Q9H582 1327 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-221ENST00000581662 ASXL1Q8IXJ9 1541 aa12.89□□□□□ -0.35
CDK5RAP3-221ENST00000581662 PIK3C2BO00750 1634 aa12.89□□□□□ -0.35
CDK5RAP3-221ENST00000581662 TRPC5Q9UL62 973 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-221ENST00000581662 CADPS2Q86UW7 1296 aa12.88□□□□□ -0.35
CDK5RAP3-221ENST00000581662 CCNB3Q8WWL7 1395 aa12.87□□□□□ -0.35
CDK5RAP3-221ENST00000581662 MKRN3Q13064 507 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-221ENST00000581662 EFCAB6Q5THR3 1501 aa12.87□□□□□ -0.35
CDK5RAP3-221ENST00000581662 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-221ENST00000581662 PSDA5PKW4 1024 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-221ENST00000581662 OCEL1Q9H607 264 aa12.86□□□□□ -0.35
CDK5RAP3-221ENST00000581662 ARHGAP31Q2M1Z3 1444 aa12.86□□□□□ -0.35
CDK5RAP3-221ENST00000581662 CCDC141Q6ZP82 1450 aa12.85□□□□□ -0.35
CDK5RAP3-221ENST00000581662 SENP3-EIF4A1A0A087X0R7 540 aa12.85□□□□□ -0.35
CDK5RAP3-221ENST00000581662 FNBP4Q8N3X1 1017 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-221ENST00000581662 USP21Q9UK80 565 aa12.85□□□□□ -0.35
CDK5RAP3-221ENST00000581662 IRX5P78411 483 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-221ENST00000581662 UNC13BO14795 1591 aa12.84□□□□□ -0.35
CDK5RAP3-221ENST00000581662 CHD2O14647 1828 aaKnown RBP12.83□□□□□ -0.35
CDK5RAP3-221ENST00000581662 LRRC59Q96AG4 307 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-221ENST00000581662 C19orf44Q9H6X5 657 aa12.83□□□□□ -0.36
CDK5RAP3-221ENST00000581662 ADAMTS2O95450 1211 aa12.82□□□□□ -0.36
CDK5RAP3-221ENST00000581662 DCCP43146 1447 aa12.81□□□□□ -0.36
CDK5RAP3-221ENST00000581662 ATF3P18847 181 aa12.81□□□□□ -0.36
CDK5RAP3-221ENST00000581662 PTCH1Q13635 1447 aa12.8□□□□□ -0.36
CDK5RAP3-221ENST00000581662 CEP152O94986 1710 aa12.8□□□□□ -0.36
CDK5RAP3-221ENST00000581662 EIF2AK4Q9P2K8 1649 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-221ENST00000581662 FYCO1Q9BQS8 1478 aa12.79□□□□□ -0.36
CDK5RAP3-221ENST00000581662 MST1RQ04912 1400 aa12.79□□□□□ -0.36
CDK5RAP3-221ENST00000581662 C14orf37Q86TY3 774 aa12.78□□□□□ -0.36
CDK5RAP3-221ENST00000581662 CABP2Q9NPB3 220 aa12.78□□□□□ -0.36
CDK5RAP3-221ENST00000581662 PLEKHG1Q9ULL1 1385 aa12.78□□□□□ -0.36
CDK5RAP3-221ENST00000581662 SPHKAPQ2M3C7 1700 aa12.77□□□□□ -0.36
CDK5RAP3-221ENST00000581662 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.373e-14■■□□□ 11.9
CDK5RAP3-221ENST00000581662 ADGRB3O60242 1522 aa12.77□□□□□ -0.37
CDK5RAP3-221ENST00000581662 ZNF784Q8NCA9 323 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-221ENST00000581662 ZFYVE9O95405 1425 aa12.76□□□□□ -0.37
CDK5RAP3-221ENST00000581662 RIOK3O14730 519 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-221ENST00000581662 SF3B2Q13435 895 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-221ENST00000581662 IDI1Q13907 227 aa12.75□□□□□ -0.37
CDK5RAP3-221ENST00000581662 CEP350Q5VT06 3117 aa12.75□□□□□ -0.37
CDK5RAP3-221ENST00000581662 DDX17Q92841 729 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-221ENST00000581662 C1QTNF8P60827 252 aa12.74□□□□□ -0.37
CDK5RAP3-221ENST00000581662 GJD4Q96KN9 370 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-221ENST00000581662 CFAP65Q6ZU64 1925 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-221ENST00000581662 GLI3P10071 1580 aa12.73□□□□□ -0.37
CDK5RAP3-221ENST00000581662 RSPH4AQ5TD94 716 aa12.73□□□□□ -0.37
CDK5RAP3-221ENST00000581662 TBX22Q9Y458 520 aa12.73□□□□□ -0.37
CDK5RAP3-221ENST00000581662 ADAMTS13Q76LX8 1427 aa12.72□□□□□ -0.37
CDK5RAP3-221ENST00000581662 R3HDM1Q15032 1099 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-221ENST00000581662 LAMC1P11047 1609 aa12.72□□□□□ -0.37
CDK5RAP3-221ENST00000581662 ARHGEF5Q12774 1597 aa12.72□□□□□ -0.37
CDK5RAP3-221ENST00000581662 MYOM2P54296 1465 aa12.72□□□□□ -0.37
CDK5RAP3-221ENST00000581662 RALGAPBQ86X10 1494 aa12.72□□□□□ -0.37
CDK5RAP3-221ENST00000581662 MTUS2Q5JR59 1369 aa12.71□□□□□ -0.37
CDK5RAP3-221ENST00000581662 PIK3R4Q99570 1358 aa12.71□□□□□ -0.37
CDK5RAP3-221ENST00000581662 COL22A1Q8NFW1 1626 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-221ENST00000581662 SLAIN1Q8ND83 568 aa12.7□□□□□ -0.38
CDK5RAP3-221ENST00000581662 RNF25Q96BH1 459 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-221ENST00000581662 FAM163AQ96GL9 167 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-221ENST00000581662 BCANQ96GW7 911 aa12.69□□□□□ -0.38
CDK5RAP3-221ENST00000581662 NOS1P29475 1434 aa12.69□□□□□ -0.38
CDK5RAP3-221ENST00000581662 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-221ENST00000581662 TRPM2O94759 1503 aa12.68□□□□□ -0.38
CDK5RAP3-221ENST00000581662 SOS2Q07890 1332 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-221ENST00000581662 VGFO15240 615 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-221ENST00000581662 ECM2O94769 699 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms