RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 BLMP54132 1417 aaPredicted RBP19.39■□□□□ 0.69
CSNK1D-218ENST00000581655 DEFB132Q7Z7B7 95 aa19.38■□□□□ 0.69
CSNK1D-218ENST00000581655 NPHP3Q7Z494 1330 aa19.36■□□□□ 0.69
CSNK1D-218ENST00000581655 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.35■□□□□ 0.69
CSNK1D-218ENST00000581655 LRP5O75197 1615 aa19.35■□□□□ 0.69
CSNK1D-218ENST00000581655 CLTCL1P53675 1640 aa19.35■□□□□ 0.69
CSNK1D-218ENST00000581655 GLI3P10071 1580 aa19.35■□□□□ 0.69
CSNK1D-218ENST00000581655 PXDNQ92626 1479 aa19.35■□□□□ 0.69
CSNK1D-218ENST00000581655 XPCQ01831 940 aaPredicted RBP19.34■□□□□ 0.69
CSNK1D-218ENST00000581655 ESCO1Q5FWF5 840 aa19.34■□□□□ 0.69
CSNK1D-218ENST00000581655 BRWD3Q6RI45 1802 aa19.34■□□□□ 0.69
CSNK1D-218ENST00000581655 RALGAPBQ86X10 1494 aa19.34■□□□□ 0.69
CSNK1D-218ENST00000581655 FOXO3O43524 673 aa19.32■□□□□ 0.68
CSNK1D-218ENST00000581655 SF3B2Q13435 895 aaKnown RBP19.32■□□□□ 0.68
CSNK1D-218ENST00000581655 UNC5CLQ8IV45 518 aa19.32■□□□□ 0.68
CSNK1D-218ENST00000581655 KIF1BO60333 1816 aa19.32■□□□□ 0.68
CSNK1D-218ENST00000581655 HFM1A2PYH4 1435 aa19.31■□□□□ 0.68
CSNK1D-218ENST00000581655 PRAG1Q86YV5 1406 aa19.31■□□□□ 0.68
CSNK1D-218ENST00000581655 SLIT2O94813 1529 aa19.3■□□□□ 0.68
CSNK1D-218ENST00000581655 ITGAEP38570 1179 aa19.29■□□□□ 0.68
CSNK1D-218ENST00000581655 CDC42BPGQ6DT37 1551 aa19.28■□□□□ 0.68
CSNK1D-218ENST00000581655 VGFO15240 615 aaPredicted RBP19.28■□□□□ 0.68
CSNK1D-218ENST00000581655 SEPT12Q8IYM1 358 aa19.27■□□□□ 0.68
CSNK1D-218ENST00000581655 PSDA5PKW4 1024 aaPredicted RBP19.26■□□□□ 0.67
CSNK1D-218ENST00000581655 LRPPRCP42704 1394 aaKnown RBP19.25■□□□□ 0.67
CSNK1D-218ENST00000581655 NUTM2FA1L443 756 aa19.25■□□□□ 0.67
CSNK1D-218ENST00000581655 USP32Q8NFA0 1604 aa19.23■□□□□ 0.67
CSNK1D-218ENST00000581655 HRCP23327 699 aa19.22■□□□□ 0.67
CSNK1D-218ENST00000581655 NAIPQ13075 1403 aa19.22■□□□□ 0.67
CSNK1D-218ENST00000581655 SPATA31A3Q5VYP0 1347 aa19.22■□□□□ 0.67
CSNK1D-218ENST00000581655 KRT27Q7Z3Y8 459 aa19.21■□□□□ 0.67
CSNK1D-218ENST00000581655 VPS72Q15906 364 aa19.2■□□□□ 0.66
CSNK1D-218ENST00000581655 CCDC9Q9Y3X0 531 aaKnown RBP19.2■□□□□ 0.66
CSNK1D-218ENST00000581655 BAG6P46379 1132 aa19.19■□□□□ 0.66
CSNK1D-218ENST00000581655 PPLO60437 1756 aa19.19■□□□□ 0.66
CSNK1D-218ENST00000581655 ONECUT3O60422 494 aaPredicted RBP19.18■□□□□ 0.66
CSNK1D-218ENST00000581655 HAP1P54257 671 aaPredicted RBP19.18■□□□□ 0.66
CSNK1D-218ENST00000581655 RPGRIP1LQ68CZ1 1315 aa19.18■□□□□ 0.66
CSNK1D-218ENST00000581655 PLCH1Q4KWH8 1693 aa19.17■□□□□ 0.66
CSNK1D-218ENST00000581655 WAPLQ7Z5K2 1190 aa19.17■□□□□ 0.66
CSNK1D-218ENST00000581655 CCDC144AA2RUR9 1427 aa19.17■□□□□ 0.66
CSNK1D-218ENST00000581655 PLEKHG5O94827 1062 aa19.16■□□□□ 0.66
CSNK1D-218ENST00000581655 KRT28Q7Z3Y7 464 aa19.16■□□□□ 0.66
CSNK1D-218ENST00000581655 NWD2Q9ULI1 1742 aa19.16■□□□□ 0.66
CSNK1D-218ENST00000581655 KIF1AQ12756 1690 aa19.15■□□□□ 0.66
CSNK1D-218ENST00000581655 A0A0G2JS52 829 aa19.15■□□□□ 0.66
CSNK1D-218ENST00000581655 MYT1Q01538 1121 aa19.15■□□□□ 0.66
CSNK1D-218ENST00000581655 CABLES1Q8TDN4 633 aa19.15■□□□□ 0.66
CSNK1D-218ENST00000581655 STK26Q9P289 416 aa19.15■□□□□ 0.66
CSNK1D-218ENST00000581655 FMN2Q9NZ56 1722 aa19.14■□□□□ 0.65
CSNK1D-218ENST00000581655 TNS3Q68CZ2 1445 aa19.13■□□□□ 0.65
CSNK1D-218ENST00000581655 TECPR2O15040 1411 aa19.12■□□□□ 0.65
CSNK1D-218ENST00000581655 PLEKHH1Q9ULM0 1364 aa19.12■□□□□ 0.65
CSNK1D-218ENST00000581655 EN1Q05925 392 aaPredicted RBP19.12■□□□□ 0.65
CSNK1D-218ENST00000581655 R3HDM1Q15032 1099 aaKnown RBP19.11■□□□□ 0.65
CSNK1D-218ENST00000581655 ABCA3Q99758 1704 aa19.1■□□□□ 0.65
CSNK1D-218ENST00000581655 ADGRF5Q8IZF2 1346 aa19.09■□□□□ 0.65
CSNK1D-218ENST00000581655 FAM98CQ17RN3 349 aaKnown RBP19.09■□□□□ 0.65
CSNK1D-218ENST00000581655 RGPD8O14715 1765 aaPredicted RBP19.09■□□□□ 0.65
CSNK1D-218ENST00000581655 RGPD1P0DJD0 1748 aa19.08■□□□□ 0.65
CSNK1D-218ENST00000581655 PSME1Q06323 249 aa19.08■□□□□ 0.64
CSNK1D-218ENST00000581655 LMOD2Q6P5Q4 547 aa19.08■□□□□ 0.64
CSNK1D-218ENST00000581655 KNDC1Q76NI1 1749 aa19.08■□□□□ 0.64
CSNK1D-218ENST00000581655 ABCC11Q96J66 1382 aa19.07■□□□□ 0.64
CSNK1D-218ENST00000581655 FAM83GA6ND36 823 aa19.07■□□□□ 0.64
CSNK1D-218ENST00000581655 PHF8Q9UPP1 1060 aa19.07■□□□□ 0.64
CSNK1D-218ENST00000581655 FAM182BQ5T319 152 aa19.06■□□□□ 0.64
CSNK1D-218ENST00000581655 TMEM132EQ6IEE7 984 aa19.06■□□□□ 0.64
CSNK1D-218ENST00000581655 RRBP1Q9P2E9 1410 aaKnown RBP19.06■□□□□ 0.64
CSNK1D-218ENST00000581655 NRAPQ86VF7 1730 aa19.05■□□□□ 0.64
CSNK1D-218ENST00000581655 IFT172Q9UG01 1749 aa19.04■□□□□ 0.64
CSNK1D-218ENST00000581655 SBNO1A3KN83 1393 aa19.04■□□□□ 0.64
CSNK1D-218ENST00000581655 ARHGEF10O15013 1369 aa19.04■□□□□ 0.64
CSNK1D-218ENST00000581655 YY1P25490 414 aa19.03■□□□□ 0.64
CSNK1D-218ENST00000581655 DISP2A7MBM2 1401 aa19.02■□□□□ 0.64
CSNK1D-218ENST00000581655 EZH2Q15910 746 aaKnown RBP19.02■□□□□ 0.64
CSNK1D-218ENST00000581655 PPARGC1BQ86YN6 1023 aaKnown RBP19.02■□□□□ 0.64
CSNK1D-218ENST00000581655 SLC4A1APQ9BWU0 796 aaKnown RBP19.02■□□□□ 0.64
CSNK1D-218ENST00000581655 BTG4Q9NY30 223 aa19.02■□□□□ 0.64
CSNK1D-218ENST00000581655 TNS1Q9HBL0 1735 aaKnown RBP19.02■□□□□ 0.63
CSNK1D-218ENST00000581655 NRXN1Q9ULB1 1477 aa19.02■□□□□ 0.63
CSNK1D-218ENST00000581655 RGL3Q3MIN7 710 aa19.01■□□□□ 0.63
CSNK1D-218ENST00000581655 YTHDC2Q9H6S0 1430 aaKnown RBP19■□□□□ 0.63
CSNK1D-218ENST00000581655 ANKRD30BQ9BXX2 1392 aa18.97■□□□□ 0.63
CSNK1D-218ENST00000581655 COL14A1Q05707 1796 aaKnown RBP18.97■□□□□ 0.63
CSNK1D-218ENST00000581655 PMFBP1Q8TBY8 1022 aa18.97■□□□□ 0.63
CSNK1D-218ENST00000581655 THSD7AQ9UPZ6 1657 aa18.97■□□□□ 0.63
CSNK1D-218ENST00000581655 PIK3C2GO75747 1445 aa18.97■□□□□ 0.63
CSNK1D-218ENST00000581655 SPATA31A5Q5VU36 1347 aa18.97■□□□□ 0.63
CSNK1D-218ENST00000581655 SPATA31A7Q8IWB4 1347 aa18.97■□□□□ 0.63
CSNK1D-218ENST00000581655 CAMKK2Q96RR4 588 aa18.96■□□□□ 0.63
CSNK1D-218ENST00000581655 ADGRB2O60241 1585 aa18.96■□□□□ 0.63
CSNK1D-218ENST00000581655 SPATA31E1Q6ZUB1 1445 aa18.95■□□□□ 0.62
CSNK1D-218ENST00000581655 TRIM37O94972 964 aa18.95■□□□□ 0.62
CSNK1D-218ENST00000581655 SIRT1Q96EB6 747 aa18.95■□□□□ 0.62
CSNK1D-218ENST00000581655 SAFB2Q14151 953 aaKnown RBP eCLIP18.93■□□□□ 0.621e-12■■■■■ 37.9
CSNK1D-218ENST00000581655 TRPM3Q9HCF6 1732 aaPredicted RBP18.93■□□□□ 0.62
CSNK1D-218ENST00000581655 ALS2Q96Q42 1657 aa18.92■□□□□ 0.62
CSNK1D-218ENST00000581655 APBA3O96018 575 aa18.91■□□□□ 0.62
CSNK1D-218ENST00000581655 FAM196AQ6ZSG2 479 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms