RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 ANO8Q9HCE9 1232 aaPredicted RBP17.54■□□□□ 0.4
CSNK1D-217ENST00000581241 RRP12Q5JTH9 1297 aaKnown RBP17.54■□□□□ 0.4
CSNK1D-217ENST00000581241 CCP110O43303 1012 aa17.53■□□□□ 0.4
CSNK1D-217ENST00000581241 MBD3O95983 291 aa17.53■□□□□ 0.4
CSNK1D-217ENST00000581241 TTC5Q8N0Z6 440 aa17.53■□□□□ 0.4
CSNK1D-217ENST00000581241 NAP1L1P55209 391 aaKnown RBP17.53■□□□□ 0.4
CSNK1D-217ENST00000581241 CAVIN1Q6NZI2 390 aaKnown RBP17.53■□□□□ 0.4
CSNK1D-217ENST00000581241 BRPF3Q9ULD4 1205 aa17.52■□□□□ 0.4
CSNK1D-217ENST00000581241 NUTM2FA1L443 756 aa17.52■□□□□ 0.4
CSNK1D-217ENST00000581241 SAFBQ15424 915 aaKnown RBP eCLIP17.52■□□□□ 0.4
CSNK1D-217ENST00000581241 PSMA5P28066 241 aa17.52■□□□□ 0.39
CSNK1D-217ENST00000581241 FKBP5Q13451 457 aaPredicted RBP17.52■□□□□ 0.39
CSNK1D-217ENST00000581241 NECTIN2Q92692 538 aa17.51■□□□□ 0.39
CSNK1D-217ENST00000581241 PDILTQ8N807 584 aa17.51■□□□□ 0.39
CSNK1D-217ENST00000581241 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
CSNK1D-217ENST00000581241 TCEAL9Q9UHQ7 104 aa17.51■□□□□ 0.39
CSNK1D-217ENST00000581241 RNF214Q8ND24 703 aa17.5■□□□□ 0.39
CSNK1D-217ENST00000581241 MINK1Q8N4C8 1332 aaPredicted RBP17.5■□□□□ 0.39
CSNK1D-217ENST00000581241 CAGE1Q8TC20 777 aa17.5■□□□□ 0.39
CSNK1D-217ENST00000581241 RUSC2Q8N2Y8 1516 aa17.5■□□□□ 0.39
CSNK1D-217ENST00000581241 CNTROBQ8N137 903 aa17.49■□□□□ 0.39
CSNK1D-217ENST00000581241 HMGN5P82970 282 aaKnown RBP17.49■□□□□ 0.39
CSNK1D-217ENST00000581241 BCL11BQ9C0K0 894 aaPredicted RBP17.49■□□□□ 0.39
CSNK1D-217ENST00000581241 TRIM5Q9C035 493 aa17.48■□□□□ 0.39
CSNK1D-217ENST00000581241 TSPYL4Q9UJ04 414 aa17.48■□□□□ 0.39
CSNK1D-217ENST00000581241 MCM2P49736 904 aa17.47■□□□□ 0.39
CSNK1D-217ENST00000581241 DCTN1Q14203 1278 aa17.47■□□□□ 0.39
CSNK1D-217ENST00000581241 TRIM34Q9BYJ4 488 aa17.47■□□□□ 0.39
CSNK1D-217ENST00000581241 RABEP1Q15276 862 aa17.47■□□□□ 0.39
CSNK1D-217ENST00000581241 PKNOX2Q96KN3 472 aa17.47■□□□□ 0.39
CSNK1D-217ENST00000581241 MYOM3Q5VTT5 1437 aa17.47■□□□□ 0.39
CSNK1D-217ENST00000581241 PRPF40AO75400 957 aaKnown RBP17.47■□□□□ 0.39
CSNK1D-217ENST00000581241 CCDC27Q2M243 656 aa17.46■□□□□ 0.39
CSNK1D-217ENST00000581241 BRMS1Q9HCU9 246 aa17.46■□□□□ 0.39
CSNK1D-217ENST00000581241 FGD6Q6ZV73 1430 aa17.46■□□□□ 0.39
CSNK1D-217ENST00000581241 SMC2O95347 1197 aa17.46■□□□□ 0.38
CSNK1D-217ENST00000581241 RBM10P98175 930 aaKnown RBP17.45■□□□□ 0.38
CSNK1D-217ENST00000581241 RDXP35241 583 aaKnown RBP17.45■□□□□ 0.38
CSNK1D-217ENST00000581241 PDZRN3Q9UPQ7 1066 aa17.45■□□□□ 0.38
CSNK1D-217ENST00000581241 LEKR1Q6ZMV7 388 aa17.44■□□□□ 0.38
CSNK1D-217ENST00000581241 RALYLQ86SE5 291 aaKnown RBP17.44■□□□□ 0.38
CSNK1D-217ENST00000581241 IL27Q8NEV9 243 aa17.44■□□□□ 0.38
CSNK1D-217ENST00000581241 H0YHG0 523 aa17.44■□□□□ 0.38
CSNK1D-217ENST00000581241 DHX16O60231 1041 aaKnown RBP17.44■□□□□ 0.38
CSNK1D-217ENST00000581241 SDF4Q9BRK5 362 aa17.43■□□□□ 0.38
CSNK1D-217ENST00000581241 CWC22Q9HCG8 908 aaKnown RBP17.43■□□□□ 0.38
CSNK1D-217ENST00000581241 SMARCE1Q969G3 411 aa17.43■□□□□ 0.38
CSNK1D-217ENST00000581241 MYO6Q9UM54 1294 aa17.43■□□□□ 0.38
CSNK1D-217ENST00000581241 RAD21O60216 631 aa17.43■□□□□ 0.38
CSNK1D-217ENST00000581241 UBTFL1P0CB47 393 aaPredicted RBP17.43■□□□□ 0.38
CSNK1D-217ENST00000581241 WASHC2AQ641Q2 1341 aa17.42■□□□□ 0.38
CSNK1D-217ENST00000581241 DHX8Q14562 1220 aaKnown RBP17.42■□□□□ 0.38
CSNK1D-217ENST00000581241 CCDC191Q8NCU4 936 aa17.42■□□□□ 0.38
CSNK1D-217ENST00000581241 GCC1Q96CN9 775 aa17.42■□□□□ 0.38
CSNK1D-217ENST00000581241 EPS15P42566 896 aa17.42■□□□□ 0.38
CSNK1D-217ENST00000581241 VPS37DQ86XT2 251 aa17.42■□□□□ 0.38
CSNK1D-217ENST00000581241 WWC1Q8IX03 1113 aa17.42■□□□□ 0.38
CSNK1D-217ENST00000581241 GRPEL1Q9HAV7 217 aa17.42■□□□□ 0.38
CSNK1D-217ENST00000581241 ADAMTS8Q9UP79 889 aa17.42■□□□□ 0.38
CSNK1D-217ENST00000581241 CTDP1Q9Y5B0 961 aaPredicted RBP17.42■□□□□ 0.38
CSNK1D-217ENST00000581241 XBP1P17861 261 aa17.41■□□□□ 0.38
CSNK1D-217ENST00000581241 ZNF396Q96N95 335 aaPredicted RBP17.41■□□□□ 0.38
CSNK1D-217ENST00000581241 KINO60870 393 aaKnown RBP17.41■□□□□ 0.38
CSNK1D-217ENST00000581241 KIF21BO75037 1637 aa17.4■□□□□ 0.38
CSNK1D-217ENST00000581241 SMARCA4P51532 1647 aa17.4■□□□□ 0.38
CSNK1D-217ENST00000581241 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
CSNK1D-217ENST00000581241 HIP1O00291 1037 aa17.4■□□□□ 0.38
CSNK1D-217ENST00000581241 STAC3Q96MF2 364 aa17.4■□□□□ 0.38
CSNK1D-217ENST00000581241 CT47A1Q5JQC4 288 aaPredicted RBP17.4■□□□□ 0.38
CSNK1D-217ENST00000581241 HMOX1P09601 288 aa17.39■□□□□ 0.38
CSNK1D-217ENST00000581241 FILIP1LQ4L180 1135 aa17.39■□□□□ 0.38
CSNK1D-217ENST00000581241 TTLL5Q6EMB2 1281 aa17.39■□□□□ 0.37
CSNK1D-217ENST00000581241 UQCRHLA0A096LP55 91 aa17.39■□□□□ 0.37
CSNK1D-217ENST00000581241 UQCRHP07919 91 aa17.39■□□□□ 0.37
CSNK1D-217ENST00000581241 WASHC4Q2M389 1173 aa17.39■□□□□ 0.37
CSNK1D-217ENST00000581241 HSP90AB2PQ58FF8 381 aa17.39■□□□□ 0.37
CSNK1D-217ENST00000581241 BACH2Q9BYV9 841 aa17.39■□□□□ 0.37
CSNK1D-217ENST00000581241 SMG6Q86US8 1419 aaKnown RBP17.39■□□□□ 0.37
CSNK1D-217ENST00000581241 NEK4P51957 841 aa17.38■□□□□ 0.37
CSNK1D-217ENST00000581241 EVA1CP58658 441 aa17.38■□□□□ 0.37
CSNK1D-217ENST00000581241 SPC24Q8NBT2 197 aa17.38■□□□□ 0.37
CSNK1D-217ENST00000581241 FSD1Q9BTV5 496 aa17.38■□□□□ 0.37
CSNK1D-217ENST00000581241 LRRC9Q6ZRR7 1453 aa17.38■□□□□ 0.37
CSNK1D-217ENST00000581241 PDCP20941 246 aa17.38■□□□□ 0.37
CSNK1D-217ENST00000581241 PDE3AQ14432 1141 aa17.38■□□□□ 0.37
CSNK1D-217ENST00000581241 RIC3Q7Z5B4 369 aa17.38■□□□□ 0.37
CSNK1D-217ENST00000581241 AEBP1Q8IUX7 1158 aa17.38■□□□□ 0.37
CSNK1D-217ENST00000581241 JPH4Q96JJ6 628 aa17.38■□□□□ 0.37
CSNK1D-217ENST00000581241 K7ELQ4 463 aaPredicted RBP17.37■□□□□ 0.37
CSNK1D-217ENST00000581241 CDCA7LQ96GN5 454 aa17.37■□□□□ 0.37
CSNK1D-217ENST00000581241 AKNAQ7Z591 1439 aa17.37■□□□□ 0.37
CSNK1D-217ENST00000581241 CCDC192P0DO97 292 aa17.37■□□□□ 0.37
CSNK1D-217ENST00000581241 NEUROD6Q96NK8 337 aa17.37■□□□□ 0.37
CSNK1D-217ENST00000581241 PRDM2Q13029 1718 aa17.37■□□□□ 0.37
CSNK1D-217ENST00000581241 CCDC43Q96MW1 224 aaKnown RBP17.37■□□□□ 0.37
CSNK1D-217ENST00000581241 SCAPERQ9BY12 1400 aa17.36■□□□□ 0.37
CSNK1D-217ENST00000581241 ODF2Q5BJF6 829 aa17.36■□□□□ 0.37
CSNK1D-217ENST00000581241 MAGEC2Q9UBF1 373 aaPredicted RBP17.36■□□□□ 0.37
CSNK1D-217ENST00000581241 GNAI3P08754 354 aa17.36■□□□□ 0.37
CSNK1D-217ENST00000581241 PPP2R1AP30153 589 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms