RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 FOXO3O43524 673 aa14.99□□□□□ -0.01
RFFL-208ENST00000581039 ATRNO75882 1429 aa14.99□□□□□ -0.01
RFFL-208ENST00000581039 KIF1BO60333 1816 aa14.99□□□□□ -0.01
RFFL-208ENST00000581039 SLC4A1APQ9BWU0 796 aaKnown RBP14.98□□□□□ -0.01
RFFL-208ENST00000581039 SRCAPQ6ZRS2 3230 aa14.98□□□□□ -0.01
RFFL-208ENST00000581039 XPCQ01831 940 aaPredicted RBP14.97□□□□□ -0.01
RFFL-208ENST00000581039 GJD4Q96KN9 370 aaPredicted RBP14.97□□□□□ -0.01
RFFL-208ENST00000581039 LRPPRCP42704 1394 aaKnown RBP14.97□□□□□ -0.01
RFFL-208ENST00000581039 NAIPQ13075 1403 aa14.96□□□□□ -0.01
RFFL-208ENST00000581039 PRAG1Q86YV5 1406 aa14.96□□□□□ -0.01
RFFL-208ENST00000581039 BCL9LQ86UU0 1499 aa14.95□□□□□ -0.02
RFFL-208ENST00000581039 NUTM2FA1L443 756 aa14.95□□□□□ -0.02
RFFL-208ENST00000581039 STK26Q9P289 416 aa14.95□□□□□ -0.02
RFFL-208ENST00000581039 WAPLQ7Z5K2 1190 aa14.94□□□□□ -0.02
RFFL-208ENST00000581039 MYOM2P54296 1465 aa14.94□□□□□ -0.02
RFFL-208ENST00000581039 COL22A1Q8NFW1 1626 aaPredicted RBP14.93□□□□□ -0.02
RFFL-208ENST00000581039 UNC5CLQ8IV45 518 aa14.93□□□□□ -0.02
RFFL-208ENST00000581039 RGL3Q3MIN7 710 aa14.92□□□□□ -0.02
RFFL-208ENST00000581039 PXDNQ92626 1479 aa14.92□□□□□ -0.02
RFFL-208ENST00000581039 ADGRF5Q8IZF2 1346 aa14.92□□□□□ -0.02
RFFL-208ENST00000581039 RRBP1Q9P2E9 1410 aaKnown RBP14.91□□□□□ -0.02
RFFL-208ENST00000581039 CDC42BPGQ6DT37 1551 aa14.9□□□□□ -0.02
RFFL-208ENST00000581039 HAP1P54257 671 aaPredicted RBP14.89□□□□□ -0.03
RFFL-208ENST00000581039 TMEM132EQ6IEE7 984 aa14.89□□□□□ -0.03
RFFL-208ENST00000581039 KRT28Q7Z3Y7 464 aa14.89□□□□□ -0.03
RFFL-208ENST00000581039 SPATA31A3Q5VYP0 1347 aa14.89□□□□□ -0.03
RFFL-208ENST00000581039 SF3B2Q13435 895 aaKnown RBP14.88□□□□□ -0.03
RFFL-208ENST00000581039 ABCC11Q96J66 1382 aa14.87□□□□□ -0.03
RFFL-208ENST00000581039 PSME1Q06323 249 aa14.87□□□□□ -0.03
RFFL-208ENST00000581039 PPLO60437 1756 aa14.87□□□□□ -0.03
RFFL-208ENST00000581039 ANKRD30BQ9BXX2 1392 aa14.86□□□□□ -0.03
RFFL-208ENST00000581039 CCDC144AA2RUR9 1427 aa14.86□□□□□ -0.03
RFFL-208ENST00000581039 TECPR2O15040 1411 aa14.86□□□□□ -0.03
RFFL-208ENST00000581039 BLMP54132 1417 aaPredicted RBP14.86□□□□□ -0.03
RFFL-208ENST00000581039 RALGAPBQ86X10 1494 aa14.86□□□□□ -0.03
RFFL-208ENST00000581039 PLEKHH1Q9ULM0 1364 aa14.85□□□□□ -0.03
RFFL-208ENST00000581039 EP400Q96L91 3159 aa14.85□□□□□ -0.03
RFFL-208ENST00000581039 SEPT12Q8IYM1 358 aa14.85□□□□□ -0.03
RFFL-208ENST00000581039 CCDC9Q9Y3X0 531 aaKnown RBP14.85□□□□□ -0.03
RFFL-208ENST00000581039 SLIT2O94813 1529 aa14.85□□□□□ -0.03
RFFL-208ENST00000581039 PLEKHG5O94827 1062 aa14.84□□□□□ -0.03
RFFL-208ENST00000581039 DEFB132Q7Z7B7 95 aa14.84□□□□□ -0.03
RFFL-208ENST00000581039 SIRT1Q96EB6 747 aa14.84□□□□□ -0.03
RFFL-208ENST00000581039 PHF8Q9UPP1 1060 aa14.84□□□□□ -0.03
RFFL-208ENST00000581039 MARF1Q9Y4F3 1742 aaKnown RBP14.83□□□□□ -0.03
RFFL-208ENST00000581039 VPS72Q15906 364 aa14.83□□□□□ -0.04
RFFL-208ENST00000581039 LMOD2Q6P5Q4 547 aa14.83□□□□□ -0.04
RFFL-208ENST00000581039 CABLES1Q8TDN4 633 aa14.83□□□□□ -0.04
RFFL-208ENST00000581039 ONECUT3O60422 494 aaPredicted RBP14.82□□□□□ -0.04
RFFL-208ENST00000581039 MPHOSPH9Q99550 1183 aa14.82□□□□□ -0.04
RFFL-208ENST00000581039 YTHDC2Q9H6S0 1430 aaKnown RBP14.82□□□□□ -0.04
RFFL-208ENST00000581039 KRT27Q7Z3Y8 459 aa14.81□□□□□ -0.04
RFFL-208ENST00000581039 SPATA31E1Q6ZUB1 1445 aa14.81□□□□□ -0.04
RFFL-208ENST00000581039 GLI3P10071 1580 aa14.81□□□□□ -0.04
RFFL-208ENST00000581039 C14orf93Q9H972 538 aaKnown RBP14.8□□□□□ -0.04
RFFL-208ENST00000581039 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.8□□□□□ -0.04
RFFL-208ENST00000581039 A0A0G2JS52 829 aa14.79□□□□□ -0.04
RFFL-208ENST00000581039 PIK3C2GO75747 1445 aa14.79□□□□□ -0.04
RFFL-208ENST00000581039 MYT1Q01538 1121 aa14.79□□□□□ -0.04
RFFL-208ENST00000581039 TNS3Q68CZ2 1445 aa14.79□□□□□ -0.04
RFFL-208ENST00000581039 KIF1AQ12756 1690 aa14.78□□□□□ -0.04
RFFL-208ENST00000581039 SBNO1A3KN83 1393 aa14.78□□□□□ -0.04
RFFL-208ENST00000581039 DHX57Q6P158 1386 aaKnown RBP14.78□□□□□ -0.04
RFFL-208ENST00000581039 FAM83GA6ND36 823 aa14.78□□□□□ -0.04
RFFL-208ENST00000581039 SAFB2Q14151 953 aaKnown RBP eCLIP14.78□□□□□ -0.04
RFFL-208ENST00000581039 USP32Q8NFA0 1604 aa14.77□□□□□ -0.04
RFFL-208ENST00000581039 ARHGEF10O15013 1369 aa14.77□□□□□ -0.04
RFFL-208ENST00000581039 CFAP70Q5T0N1 1121 aa14.77□□□□□ -0.05
RFFL-208ENST00000581039 PRAM1Q96QH2 718 aa14.77□□□□□ -0.05
RFFL-208ENST00000581039 FMN2Q9NZ56 1722 aa14.77□□□□□ -0.05
RFFL-208ENST00000581039 BAG6P46379 1132 aa14.76□□□□□ -0.05
RFFL-208ENST00000581039 PMFBP1Q8TBY8 1022 aa14.76□□□□□ -0.05
RFFL-208ENST00000581039 POGKQ9P215 609 aa14.76□□□□□ -0.05
RFFL-208ENST00000581039 KNDC1Q76NI1 1749 aa14.75□□□□□ -0.05
RFFL-208ENST00000581039 FAM98CQ17RN3 349 aaKnown RBP14.74□□□□□ -0.05
RFFL-208ENST00000581039 BTG4Q9NY30 223 aa14.74□□□□□ -0.05
RFFL-208ENST00000581039 NRXN1Q9ULB1 1477 aa14.74□□□□□ -0.05
RFFL-208ENST00000581039 BRWD3Q6RI45 1802 aa14.73□□□□□ -0.05
RFFL-208ENST00000581039 PSDA5PKW4 1024 aaPredicted RBP14.73□□□□□ -0.05
RFFL-208ENST00000581039 IFT172Q9UG01 1749 aa14.72□□□□□ -0.05
RFFL-208ENST00000581039 ACIN1Q9UKV3 1341 aaKnown RBP14.71□□□□□ -0.05
RFFL-208ENST00000581039 GPRASP1Q5JY77 1395 aa14.71□□□□□ -0.06
RFFL-208ENST00000581039 NWD2Q9ULI1 1742 aa14.7□□□□□ -0.06
RFFL-208ENST00000581039 HRCP23327 699 aa14.7□□□□□ -0.06
RFFL-208ENST00000581039 EN1Q05925 392 aaPredicted RBP14.7□□□□□ -0.06
RFFL-208ENST00000581039 RGPD8O14715 1765 aaPredicted RBP14.7□□□□□ -0.06
RFFL-208ENST00000581039 ANKARQ7Z5J8 1434 aa14.69□□□□□ -0.06
RFFL-208ENST00000581039 HIRIP3Q9BW71 556 aaPredicted RBP14.69□□□□□ -0.06
RFFL-208ENST00000581039 PLCH1Q4KWH8 1693 aa14.68□□□□□ -0.06
RFFL-208ENST00000581039 FAM182BQ5T319 152 aa14.68□□□□□ -0.06
RFFL-208ENST00000581039 TRAK1Q9UPV9 953 aa14.68□□□□□ -0.06
RFFL-208ENST00000581039 PAK3O75914 559 aaPredicted RBP14.67□□□□□ -0.06
RFFL-208ENST00000581039 NGDNQ8NEJ9 315 aaKnown RBP14.67□□□□□ -0.06
RFFL-208ENST00000581039 SPATA31A5Q5VU36 1347 aa14.66□□□□□ -0.06
RFFL-208ENST00000581039 SPATA31A7Q8IWB4 1347 aa14.66□□□□□ -0.06
RFFL-208ENST00000581039 MINK1Q8N4C8 1332 aaPredicted RBP14.66□□□□□ -0.06
RFFL-208ENST00000581039 EIF3AQ14152 1382 aaKnown RBP14.66□□□□□ -0.06
RFFL-208ENST00000581039 WASLO00401 505 aaPredicted RBP14.65□□□□□ -0.06
RFFL-208ENST00000581039 R3HDM1Q15032 1099 aaKnown RBP14.65□□□□□ -0.06
RFFL-208ENST00000581039 PRDM11Q9NQV5 511 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms