RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 SMPD1P17405 629 aa9.46□□□□□ -0.9
SMG8-205ENST00000580798 WNT7AO00755 349 aa9.45□□□□□ -0.9
SMG8-205ENST00000580798 PHOX2BQ99453 314 aa9.45□□□□□ -0.9
SMG8-205ENST00000580798 ATP13A2Q9NQ11 1180 aa9.45□□□□□ -0.9
SMG8-205ENST00000580798 STK17AQ9UEE5 414 aa9.45□□□□□ -0.9
SMG8-205ENST00000580798 TESPA1A2RU30 521 aaPredicted RBP9.44□□□□□ -0.9
SMG8-205ENST00000580798 LCE2CQ5TA81 110 aa9.44□□□□□ -0.9
SMG8-205ENST00000580798 SULF1Q8IWU6 871 aa9.44□□□□□ -0.9
SMG8-205ENST00000580798 SNIP1Q8TAD8 396 aaKnown RBP9.44□□□□□ -0.9
SMG8-205ENST00000580798 SNRPBP14678 240 aaKnown RBP9.43□□□□□ -0.9
SMG8-205ENST00000580798 TRIM32Q13049 653 aa9.43□□□□□ -0.9
SMG8-205ENST00000580798 J3QL48 77 aa9.42□□□□□ -0.9
SMG8-205ENST00000580798 INSM1Q01101 510 aaPredicted RBP9.42□□□□□ -0.9
SMG8-205ENST00000580798 MRGPRX2Q96LB1 330 aa9.42□□□□□ -0.9
SMG8-205ENST00000580798 MMP16P51512 607 aa9.4□□□□□ -0.9
SMG8-205ENST00000580798 TRIM47Q96LD4 638 aa9.4□□□□□ -0.9
SMG8-205ENST00000580798 TERTO14746 1132 aaKnown RBP9.39□□□□□ -0.91
SMG8-205ENST00000580798 GRIPAP1Q4V328 841 aa9.39□□□□□ -0.91
SMG8-205ENST00000580798 SMYD5Q6GMV2 418 aa9.39□□□□□ -0.91
SMG8-205ENST00000580798 HPS1Q92902 700 aa9.38□□□□□ -0.91
SMG8-205ENST00000580798 SENP2Q9HC62 589 aa9.37□□□□□ -0.91
SMG8-205ENST00000580798 Q3C1V9 767 aa9.36□□□□□ -0.91
SMG8-205ENST00000580798 DXOO77932 396 aaKnown RBP9.35□□□□□ -0.91
SMG8-205ENST00000580798 REPIN1Q9BWE0 567 aaKnown RBP9.35□□□□□ -0.91
SMG8-205ENST00000580798 USB1Q9BQ65 265 aaKnown RBP9.34□□□□□ -0.91
SMG8-205ENST00000580798 CD46P15529 392 aa9.33□□□□□ -0.92
SMG8-205ENST00000580798 SKOR1P84550 965 aa9.33□□□□□ -0.92
SMG8-205ENST00000580798 RC3H1Q5TC82 1133 aaKnown RBP9.32□□□□□ -0.92
SMG8-205ENST00000580798 KIFC2Q96AC6 838 aa9.32□□□□□ -0.92
SMG8-205ENST00000580798 CCDC24Q8N4L8 307 aa9.31□□□□□ -0.92
SMG8-205ENST00000580798 KDM4AO75164 1064 aa9.3□□□□□ -0.92
SMG8-205ENST00000580798 HLA-CQ95604 372 aa9.3□□□□□ -0.92
SMG8-205ENST00000580798 WNT7BP56706 349 aa9.29□□□□□ -0.92
SMG8-205ENST00000580798 GPIHBP1Q8IV16 184 aa9.28□□□□□ -0.92
SMG8-205ENST00000580798 ALDH1A1P00352 501 aa9.27□□□□□ -0.93
SMG8-205ENST00000580798 SLC16A10Q8TF71 515 aa9.25□□□□□ -0.93
SMG8-205ENST00000580798 NXF1Q9UBU9 619 aaKnown RBP9.25□□□□□ -0.93
SMG8-205ENST00000580798 HOXA2O43364 376 aa9.24□□□□□ -0.93
SMG8-205ENST00000580798 SIAH2O43255 324 aa9.23□□□□□ -0.93
SMG8-205ENST00000580798 BMP1P13497 986 aa9.23□□□□□ -0.93
SMG8-205ENST00000580798 JUNDP17535 347 aa9.23□□□□□ -0.93
SMG8-205ENST00000580798 GMPRP36959 345 aa9.23□□□□□ -0.93
SMG8-205ENST00000580798 USP46P62068 366 aa9.23□□□□□ -0.93
SMG8-205ENST00000580798 GUCA2AQ02747 115 aa9.23□□□□□ -0.93
SMG8-205ENST00000580798 TRIM46Q7Z4K8 759 aa9.23□□□□□ -0.93
SMG8-205ENST00000580798 LORP23490 312 aaPredicted RBP9.22□□□□□ -0.93
SMG8-205ENST00000580798 SYMPKQ92797 1274 aaKnown RBP9.22□□□□□ -0.93
SMG8-205ENST00000580798 MDM2Q00987 491 aaPredicted RBP9.21□□□□□ -0.94
SMG8-205ENST00000580798 MAP2K5Q13163 448 aa9.21□□□□□ -0.94
SMG8-205ENST00000580798 PTCRAQ6ISU1 281 aaPredicted RBP9.21□□□□□ -0.94
SMG8-205ENST00000580798 FAM181BA6NEQ2 426 aa9.2□□□□□ -0.94
SMG8-205ENST00000580798 CAPN5O15484 640 aaPredicted RBP9.19□□□□□ -0.94
SMG8-205ENST00000580798 NPAS3Q8IXF0 933 aa9.19□□□□□ -0.94
SMG8-205ENST00000580798 EHBP1Q8NDI1 1231 aa9.19□□□□□ -0.94
SMG8-205ENST00000580798 VEGFBP49765 207 aa9.18□□□□□ -0.94
SMG8-205ENST00000580798 ZSCAN1Q8NBB4 408 aa9.18□□□□□ -0.94
SMG8-205ENST00000580798 IRF7Q92985 503 aa9.18□□□□□ -0.94
SMG8-205ENST00000580798 NUDT12Q9BQG2 462 aa9.18□□□□□ -0.94
SMG8-205ENST00000580798 IRF6O14896 467 aa9.17□□□□□ -0.94
SMG8-205ENST00000580798 WASF2Q9Y6W5 498 aa9.17□□□□□ -0.94
SMG8-205ENST00000580798 SH3BP2P78314 561 aa9.16□□□□□ -0.94
SMG8-205ENST00000580798 RETREG3Q86VR2 466 aa9.16□□□□□ -0.94
SMG8-205ENST00000580798 ERBB4Q15303 1308 aa9.15□□□□□ -0.94
SMG8-205ENST00000580798 H3BM21 787 aa9.15□□□□□ -0.94
SMG8-205ENST00000580798 PLCB2Q00722 1185 aa9.14□□□□□ -0.95
SMG8-205ENST00000580798 ZFP42Q96MM3 310 aa9.13□□□□□ -0.95
SMG8-205ENST00000580798 MINK1Q8N4C8 1332 aaPredicted RBP9.12□□□□□ -0.95
SMG8-205ENST00000580798 FAM217BQ9NTX9 383 aaPredicted RBP9.12□□□□□ -0.95
SMG8-205ENST00000580798 CCNYL3P0C7X3 344 aa9.11□□□□□ -0.95
SMG8-205ENST00000580798 CCDC102AQ96A19 550 aa9.11□□□□□ -0.95
SMG8-205ENST00000580798 GPCPD1Q9NPB8 672 aa9.11□□□□□ -0.95
SMG8-205ENST00000580798 PCDHGC3Q9UN70 934 aa9.11□□□□□ -0.95
SMG8-205ENST00000580798 MS4A1P11836 297 aa9.1□□□□□ -0.95
SMG8-205ENST00000580798 NUTM1Q86Y26 1132 aa9.1□□□□□ -0.95
SMG8-205ENST00000580798 TLL2Q9Y6L7 1015 aa9.1□□□□□ -0.95
SMG8-205ENST00000580798 FDX1P10109 184 aa9.09□□□□□ -0.95
SMG8-205ENST00000580798 LINC01559Q495D7 138 aa9.09□□□□□ -0.95
SMG8-205ENST00000580798 UNC93B1Q9H1C4 597 aa9.09□□□□□ -0.95
SMG8-205ENST00000580798 LOC100996750A0A140TA64 210 aa9.08□□□□□ -0.96
SMG8-205ENST00000580798 C6orf229H3BNL8 230 aa9.08□□□□□ -0.96
SMG8-205ENST00000580798 CLCN1P35523 988 aa9.08□□□□□ -0.96
SMG8-205ENST00000580798 KRTAP4-6Q9BYQ5 205 aa9.08□□□□□ -0.96
SMG8-205ENST00000580798 PTPRNQ16849 979 aa9.07□□□□□ -0.96
SMG8-205ENST00000580798 BAP1Q92560 729 aa9.07□□□□□ -0.96
SMG8-205ENST00000580798 EVA1BQ9NVM1 165 aa9.07□□□□□ -0.96
SMG8-205ENST00000580798 NNTQ13423 1086 aa9.06□□□□□ -0.96
SMG8-205ENST00000580798 MRPL14Q6P1L8 145 aaKnown RBP9.06□□□□□ -0.96
SMG8-205ENST00000580798 PLEKHG3A1L390 1219 aa9.04□□□□□ -0.96
SMG8-205ENST00000580798 SOBPA7XYQ1 873 aa9.04□□□□□ -0.96
SMG8-205ENST00000580798 TIMP2P16035 220 aa9.04□□□□□ -0.96
SMG8-205ENST00000580798 VARSP26640 1264 aaKnown RBP9.04□□□□□ -0.96
SMG8-205ENST00000580798 KCNH2Q12809 1159 aa9.04□□□□□ -0.96
SMG8-205ENST00000580798 MPNDQ8N594 471 aa9.04□□□□□ -0.96
SMG8-205ENST00000580798 ZNF511Q8NB15 262 aa9.04□□□□□ -0.96
SMG8-205ENST00000580798 PURBQ96QR8 312 aaKnown RBP9.04□□□□□ -0.96
SMG8-205ENST00000580798 VSIG8P0DPA2 414 aa9.02□□□□□ -0.97
SMG8-205ENST00000580798 WDR4P57081 412 aaKnown RBP9.02□□□□□ -0.97
SMG8-205ENST00000580798 SCARF1Q14162 830 aa9.02□□□□□ -0.97
SMG8-205ENST00000580798 SPIRE2Q8WWL2 714 aa9.02□□□□□ -0.97
SMG8-205ENST00000580798 ADH1CP00326 375 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms