RNA–Protein interactions for RNA: ENST00000580691.5

CYB561-211, Transcript of cytochrome b561, human

TSL 1 (best)

Gene CYB561, Length 1,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYB561-211	ENST00000580691	MED1	Q15648	1581 aa	Predicted RBP	33.05	■■■□□ 2.88
CYB561-211	ENST00000580691	PRAM1	Q96QH2	718 aa		33.05	■■■□□ 2.88
CYB561-211	ENST00000580691	PLEKHH1	Q9ULM0	1364 aa		33.04	■■■□□ 2.88
CYB561-211	ENST00000580691	COL16A1	Q07092	1604 aa	Predicted RBP	33.03	■■■□□ 2.88
CYB561-211	ENST00000580691	KIAA1210	Q9ULL0	1709 aa		33.02	■■■□□ 2.88
CYB561-211	ENST00000580691	L3MBTL2	Q969R5	705 aa		33.01	■■■□□ 2.87
CYB561-211	ENST00000580691	SIN3A	Q96ST3	1273 aa		33.01	■■■□□ 2.87
CYB561-211	ENST00000580691	TRAK1	Q9UPV9	953 aa		33.01	■■■□□ 2.87
CYB561-211	ENST00000580691	NEUROD1	Q13562	356 aa		33	■■■□□ 2.87
CYB561-211	ENST00000580691	LRRC59	Q96AG4	307 aa	Known RBP	32.98	■■■□□ 2.87
CYB561-211	ENST00000580691	NHSL1	Q5SYE7	1610 aa		32.98	■■■□□ 2.87
CYB561-211	ENST00000580691	SPATA31A6	Q5VVP1	1343 aa		32.98	■■■□□ 2.87
CYB561-211	ENST00000580691	PHF23	Q9BUL5	403 aa	Predicted RBP	32.97	■■■□□ 2.87
CYB561-211	ENST00000580691	ESCO1	Q5FWF5	840 aa		32.95	■■■□□ 2.87
CYB561-211	ENST00000580691	EIF3A	Q14152	1382 aa	Known RBP	32.95	■■■□□ 2.86
CYB561-211	ENST00000580691	ORAI2	Q96SN7	254 aa		32.94	■■■□□ 2.86
CYB561-211	ENST00000580691	NPHP3	Q7Z494	1330 aa		32.93	■■■□□ 2.86
CYB561-211	ENST00000580691	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.91	■■■□□ 2.86
CYB561-211	ENST00000580691	ADGRB2	O60241	1585 aa		32.9	■■■□□ 2.86
CYB561-211	ENST00000580691	FMN2	Q9NZ56	1722 aa		32.89	■■■□□ 2.86
CYB561-211	ENST00000580691	SHPRH	Q149N8	1683 aa		32.88	■■■□□ 2.85
CYB561-211	ENST00000580691	SOS2	Q07890	1332 aa	Predicted RBP	32.88	■■■□□ 2.85
CYB561-211	ENST00000580691	ANKAR	Q7Z5J8	1434 aa		32.87	■■■□□ 2.85
CYB561-211	ENST00000580691	TONSL	Q96HA7	1378 aa		32.86	■■■□□ 2.85
CYB561-211	ENST00000580691	NUTM2F	A1L443	756 aa		32.83	■■■□□ 2.85
CYB561-211	ENST00000580691	NBPF1	Q3BBV0	1214 aa		32.83	■■■□□ 2.85
CYB561-211	ENST00000580691	KIF1A	Q12756	1690 aa		32.82	■■■□□ 2.84
CYB561-211	ENST00000580691	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.82	■■■□□ 2.84
CYB561-211	ENST00000580691	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.81	■■■□□ 2.84
CYB561-211	ENST00000580691	DDX17	Q92841	729 aa	Known RBP	32.81	■■■□□ 2.84
CYB561-211	ENST00000580691	WASL	O00401	505 aa	Predicted RBP	32.8	■■■□□ 2.84
CYB561-211	ENST00000580691	FOXO3	O43524	673 aa		32.79	■■■□□ 2.84
CYB561-211	ENST00000580691	PHF8	Q9UPP1	1060 aa		32.79	■■■□□ 2.84
CYB561-211	ENST00000580691	CLSPN	Q9HAW4	1339 aa		32.77	■■■□□ 2.84
CYB561-211	ENST00000580691	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.77	■■■□□ 2.84
CYB561-211	ENST00000580691	PNPLA6	Q8IY17	1366 aa		32.77	■■■□□ 2.84
CYB561-211	ENST00000580691	ROCK2	O75116	1388 aa	Known RBP	32.76	■■■□□ 2.83
CYB561-211	ENST00000580691	MEX3C	Q5U5Q3	659 aa	Known RBP	32.76	■■■□□ 2.83
CYB561-211	ENST00000580691	PCGF6	Q9BYE7	350 aa		32.76	■■■□□ 2.83
CYB561-211	ENST00000580691	TULP4	Q9NRJ4	1543 aa		32.75	■■■□□ 2.83
CYB561-211	ENST00000580691	PSME1	Q06323	249 aa		32.74	■■■□□ 2.83
CYB561-211	ENST00000580691	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.74	■■■□□ 2.83
CYB561-211	ENST00000580691	PXDN	Q92626	1479 aa		32.74	■■■□□ 2.83
CYB561-211	ENST00000580691	TRPM1	Q7Z4N2	1603 aa		32.73	■■■□□ 2.83
CYB561-211	ENST00000580691	ILDR2	Q71H61	639 aa		32.69	■■■□□ 2.82
CYB561-211	ENST00000580691	KRT28	Q7Z3Y7	464 aa		32.68	■■■□□ 2.82
CYB561-211	ENST00000580691	LRP6	O75581	1613 aa		32.68	■■■□□ 2.82
CYB561-211	ENST00000580691	GPRASP1	Q5JY77	1395 aa		32.68	■■■□□ 2.82
CYB561-211	ENST00000580691	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.67	■■■□□ 2.82
CYB561-211	ENST00000580691	NUTM2E	B1AL46	878 aa	Predicted RBP	32.67	■■■□□ 2.82
CYB561-211	ENST00000580691	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.67	■■■□□ 2.82
CYB561-211	ENST00000580691	TIMELESS	Q9UNS1	1208 aa		32.66	■■■□□ 2.82
CYB561-211	ENST00000580691	CDK19	Q9BWU1	502 aa		32.65	■■■□□ 2.82
CYB561-211	ENST00000580691	NBPF8	Q3BBV2	869 aa		32.64	■■■□□ 2.82
CYB561-211	ENST00000580691	ZNF772	Q68DY9	489 aa	Predicted RBP	32.64	■■■□□ 2.82
CYB561-211	ENST00000580691	USP32	Q8NFA0	1604 aa		32.64	■■■□□ 2.82
CYB561-211	ENST00000580691	SBNO1	A3KN83	1393 aa		32.63	■■■□□ 2.81
CYB561-211	ENST00000580691	SPATA31A3	Q5VYP0	1347 aa		32.63	■■■□□ 2.81
CYB561-211	ENST00000580691	NUDT16	Q96DE0	195 aa	Known RBP	32.63	■■■□□ 2.81
CYB561-211	ENST00000580691	RGS17	Q9UGC6	210 aa	Predicted RBP	32.63	■■■□□ 2.81
CYB561-211	ENST00000580691	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.62	■■■□□ 2.81
CYB561-211	ENST00000580691	PRR36	Q9H6K5	1346 aa		32.62	■■■□□ 2.81
CYB561-211	ENST00000580691	XPC	Q01831	940 aa	Predicted RBP	32.62	■■■□□ 2.81
CYB561-211	ENST00000580691	RGPD8	O14715	1765 aa	Predicted RBP	32.62	■■■□□ 2.81
CYB561-211	ENST00000580691	RALGAPB	Q86X10	1494 aa		32.61	■■■□□ 2.81
CYB561-211	ENST00000580691	PMFBP1	Q8TBY8	1022 aa		32.6	■■■□□ 2.81
CYB561-211	ENST00000580691	CCDC61	Q9Y6R9	512 aa		32.6	■■■□□ 2.81
CYB561-211	ENST00000580691	ATP7B	P35670	1465 aa		32.6	■■■□□ 2.81
CYB561-211	ENST00000580691	NGDN	Q8NEJ9	315 aa	Known RBP	32.59	■■■□□ 2.81
CYB561-211	ENST00000580691	CARD11	Q9BXL7	1154 aa		32.59	■■■□□ 2.81
CYB561-211	ENST00000580691	ITSN1	Q15811	1721 aa		32.59	■■■□□ 2.81
CYB561-211	ENST00000580691	TNS3	Q68CZ2	1445 aa		32.59	■■■□□ 2.81
CYB561-211	ENST00000580691	ARHGEF10	O15013	1369 aa		32.58	■■■□□ 2.81
CYB561-211	ENST00000580691	SRPK2	P78362	688 aa	Known RBP	32.56	■■■□□ 2.8
CYB561-211	ENST00000580691	EVC2	Q86UK5	1308 aa		32.55	■■■□□ 2.8
CYB561-211	ENST00000580691	QRICH2	Q9H0J4	1663 aa		32.55	■■■□□ 2.8
CYB561-211	ENST00000580691	SOCS7	O14512	581 aa		32.54	■■■□□ 2.8
CYB561-211	ENST00000580691	PLEKHG3	A1L390	1219 aa		32.52	■■■□□ 2.8
CYB561-211	ENST00000580691	SBNO2	Q9Y2G9	1366 aa		32.51	■■■□□ 2.79
CYB561-211	ENST00000580691	ADAMTS2	O95450	1211 aa		32.51	■■■□□ 2.79
CYB561-211	ENST00000580691	C8orf37	Q96NL8	207 aa		32.51	■■■□□ 2.79
CYB561-211	ENST00000580691	POTEA	Q6S8J7	498 aa		32.5	■■■□□ 2.79
CYB561-211	ENST00000580691	SLC24A1	O60721	1099 aa		32.49	■■■□□ 2.79
CYB561-211	ENST00000580691	NGLY1	Q96IV0	654 aa		32.49	■■■□□ 2.79
CYB561-211	ENST00000580691	AFF2	P51816	1311 aa		32.49	■■■□□ 2.79
CYB561-211	ENST00000580691	POLR3A	O14802	1390 aa	Predicted RBP	32.48	■■■□□ 2.79
CYB561-211	ENST00000580691	LMOD2	Q6P5Q4	547 aa		32.47	■■■□□ 2.79
CYB561-211	ENST00000580691	CCER1	Q8TC90	406 aa	Predicted RBP	32.46	■■■□□ 2.79
CYB561-211	ENST00000580691	HAP1	P54257	671 aa	Predicted RBP	32.45	■■■□□ 2.79
CYB561-211	ENST00000580691	CABP2	Q9NPB3	220 aa		32.45	■■■□□ 2.79
CYB561-211	ENST00000580691	TOPAZ1	Q8N9V7	1692 aa		32.45	■■■□□ 2.79
CYB561-211	ENST00000580691	ACE	P12821	1306 aa		32.44	■■■□□ 2.78
CYB561-211	ENST00000580691	BRD4	O60885	1362 aa	Predicted RBP	32.44	■■■□□ 2.78
CYB561-211	ENST00000580691	PPIP5K1	Q6PFW1	1433 aa		32.43	■■■□□ 2.78
CYB561-211	ENST00000580691	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.42	■■■□□ 2.78
CYB561-211	ENST00000580691	ATAD2	Q6PL18	1390 aa		32.41	■■■□□ 2.78
CYB561-211	ENST00000580691	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.4	■■■□□ 2.78
CYB561-211	ENST00000580691	PAK3	O75914	559 aa	Predicted RBP	32.4	■■■□□ 2.78
CYB561-211	ENST00000580691	RXRB	P28702	533 aa		32.38	■■■□□ 2.77
CYB561-211	ENST00000580691	USP21	Q9UK80	565 aa		32.36	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms