RNA–Protein interactions for RNA: ENST00000580048.1

LINC00909-202, long intergenic non-protein coding RNA 909, humanhuman

TSL 1 (best) BASIC

Gene LINC00909, Length 3,463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00909-202ENST00000580048 FAM177BA6PVY3 158 aa12.73□□□□□ -0.37
LINC00909-202ENST00000580048 K7ELQ4 463 aaPredicted RBP12.73□□□□□ -0.37
LINC00909-202ENST00000580048 SNX21Q969T3 373 aa12.73□□□□□ -0.37
LINC00909-202ENST00000580048 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.73□□□□□ -0.37
LINC00909-202ENST00000580048 RBM27Q9P2N5 1060 aaKnown RBP12.73□□□□□ -0.37
LINC00909-202ENST00000580048 DZIP1LQ8IYY4 767 aaKnown RBP12.72□□□□□ -0.37
LINC00909-202ENST00000580048 ZKSCAN2Q63HK3 967 aa12.71□□□□□ -0.37
LINC00909-202ENST00000580048 ZSCAN20P17040 1043 aaPredicted RBP12.71□□□□□ -0.37
LINC00909-202ENST00000580048 DNMBPQ6XZF7 1577 aa12.71□□□□□ -0.38
LINC00909-202ENST00000580048 IGSF3O75054 1194 aa12.71□□□□□ -0.38
LINC00909-202ENST00000580048 PRPF40AO75400 957 aaKnown RBP12.71□□□□□ -0.38
LINC00909-202ENST00000580048 RBM25P49756 843 aaKnown RBP12.71□□□□□ -0.38
LINC00909-202ENST00000580048 HS1BP3Q53T59 392 aa12.71□□□□□ -0.38
LINC00909-202ENST00000580048 HNRNPMP52272 730 aaKnown RBP eCLIP12.7□□□□□ -0.38
LINC00909-202ENST00000580048 FOXD4L5Q5VV16 416 aaPredicted RBP12.7□□□□□ -0.38
LINC00909-202ENST00000580048 FOXD4L4Q8WXT5 416 aaPredicted RBP12.7□□□□□ -0.38
LINC00909-202ENST00000580048 PPP4R3BQ5MIZ7 849 aa12.7□□□□□ -0.38
LINC00909-202ENST00000580048 TCP11L2Q8N4U5 519 aa12.7□□□□□ -0.38
LINC00909-202ENST00000580048 SMC4Q9NTJ3 1288 aa12.7□□□□□ -0.38
LINC00909-202ENST00000580048 CDCA8Q53HL2 280 aa12.7□□□□□ -0.38
LINC00909-202ENST00000580048 CCDC39Q9UFE4 941 aa12.69□□□□□ -0.38
LINC00909-202ENST00000580048 ZMYM3Q14202 1370 aa12.69□□□□□ -0.38
LINC00909-202ENST00000580048 NCOA3Q9Y6Q9 1424 aa12.69□□□□□ -0.38
LINC00909-202ENST00000580048 SYCE3A1L190 88 aa12.68□□□□□ -0.38
LINC00909-202ENST00000580048 SPDYE4A6NLX3 237 aa12.68□□□□□ -0.38
LINC00909-202ENST00000580048 ZNF445P59923 1031 aa12.68□□□□□ -0.38
LINC00909-202ENST00000580048 UTP14CQ5TAP6 766 aaKnown RBP12.68□□□□□ -0.38
LINC00909-202ENST00000580048 BCL11BQ9C0K0 894 aaPredicted RBP12.68□□□□□ -0.38
LINC00909-202ENST00000580048 WDR62O43379 1518 aa12.68□□□□□ -0.38
LINC00909-202ENST00000580048 PRDM2Q13029 1718 aa12.67□□□□□ -0.38
LINC00909-202ENST00000580048 CHAMP1Q96JM3 812 aa12.67□□□□□ -0.38
LINC00909-202ENST00000580048 KIAA2012Q0VF49 1180 aa12.67□□□□□ -0.38
LINC00909-202ENST00000580048 TPRNQ4KMQ1 711 aa12.67□□□□□ -0.38
LINC00909-202ENST00000580048 TSR2Q969E8 191 aaKnown RBP12.67□□□□□ -0.38
LINC00909-202ENST00000580048 PIK3C2GO75747 1445 aa12.66□□□□□ -0.38
LINC00909-202ENST00000580048 PKP1Q13835 747 aa12.66□□□□□ -0.38
LINC00909-202ENST00000580048 C9orf84Q5VXU9 1444 aa12.66□□□□□ -0.38
LINC00909-202ENST00000580048 GPRASP1Q5JY77 1395 aa12.66□□□□□ -0.38
LINC00909-202ENST00000580048 NGEFQ8N5V2 710 aa12.66□□□□□ -0.38
LINC00909-202ENST00000580048 PDLIM2Q96JY6 352 aa12.66□□□□□ -0.38
LINC00909-202ENST00000580048 ZNF830Q96NB3 372 aaPredicted RBP12.66□□□□□ -0.38
LINC00909-202ENST00000580048 CHMP4BQ9H444 224 aaKnown RBP12.66□□□□□ -0.38
LINC00909-202ENST00000580048 WDR7Q9Y4E6 1490 aa12.65□□□□□ -0.38
LINC00909-202ENST00000580048 GTF2E1P29083 439 aaPredicted RBP12.65□□□□□ -0.38
LINC00909-202ENST00000580048 ANKRD45Q5TZF3 282 aa12.65□□□□□ -0.38
LINC00909-202ENST00000580048 KIF2CQ99661 725 aa12.65□□□□□ -0.38
LINC00909-202ENST00000580048 KDM5DQ9BY66 1539 aa12.65□□□□□ -0.38
LINC00909-202ENST00000580048 RUNDC1Q96C34 613 aa12.64□□□□□ -0.39
LINC00909-202ENST00000580048 LMBRD1Q9NUN5 540 aa12.64□□□□□ -0.39
LINC00909-202ENST00000580048 GPATCH8Q9UKJ3 1502 aaKnown RBP12.64□□□□□ -0.39
LINC00909-202ENST00000580048 VGLL3A8MV65 326 aa12.64□□□□□ -0.39
LINC00909-202ENST00000580048 TRIM27P14373 513 aa12.64□□□□□ -0.39
LINC00909-202ENST00000580048 MCM5P33992 734 aa12.64□□□□□ -0.39
LINC00909-202ENST00000580048 DDX19BQ9UMR2 479 aa12.64□□□□□ -0.39
LINC00909-202ENST00000580048 IBTKQ9P2D0 1353 aaPredicted RBP12.64□□□□□ -0.39
LINC00909-202ENST00000580048 A2MP01023 1474 aa12.64□□□□□ -0.39
LINC00909-202ENST00000580048 CLASP1Q7Z460 1538 aa12.64□□□□□ -0.39
LINC00909-202ENST00000580048 ATP2B3Q16720 1220 aa12.64□□□□□ -0.39
LINC00909-202ENST00000580048 C17orf53Q8N3J3 647 aaPredicted RBP12.64□□□□□ -0.39
LINC00909-202ENST00000580048 KIF16BQ96L93 1317 aa12.64□□□□□ -0.39
LINC00909-202ENST00000580048 MAPK8IP2Q13387 824 aaPredicted RBP12.63□□□□□ -0.39
LINC00909-202ENST00000580048 STAC3Q96MF2 364 aa12.63□□□□□ -0.39
LINC00909-202ENST00000580048 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.63□□□□□ -0.39
LINC00909-202ENST00000580048 ADGRL2O95490 1459 aa12.63□□□□□ -0.39
LINC00909-202ENST00000580048 TRPM1Q7Z4N2 1603 aa12.63□□□□□ -0.39
LINC00909-202ENST00000580048 LAMC3Q9Y6N6 1575 aa12.63□□□□□ -0.39
LINC00909-202ENST00000580048 ASXL1Q8IXJ9 1541 aa12.63□□□□□ -0.39
LINC00909-202ENST00000580048 NUCB2P80303 420 aa12.63□□□□□ -0.39
LINC00909-202ENST00000580048 HDAC1Q13547 482 aaPredicted RBP12.63□□□□□ -0.39
LINC00909-202ENST00000580048 MYRIPQ8NFW9 859 aa12.63□□□□□ -0.39
LINC00909-202ENST00000580048 NAP1L2Q9ULW6 460 aaPredicted RBP12.63□□□□□ -0.39
LINC00909-202ENST00000580048 TBC1D9Q6ZT07 1266 aa12.63□□□□□ -0.39
LINC00909-202ENST00000580048 CHD1LQ86WJ1 897 aa12.63□□□□□ -0.39
LINC00909-202ENST00000580048 GTPBP4Q9BZE4 634 aaKnown RBP12.63□□□□□ -0.39
LINC00909-202ENST00000580048 CEP170Q5SW79 1584 aa12.62□□□□□ -0.39
LINC00909-202ENST00000580048 FOXD4L6Q3SYB3 417 aaPredicted RBP12.62□□□□□ -0.39
LINC00909-202ENST00000580048 FOXD4L3Q6VB84 417 aaPredicted RBP12.62□□□□□ -0.39
LINC00909-202ENST00000580048 MORC1Q86VD1 984 aa12.62□□□□□ -0.39
LINC00909-202ENST00000580048 CGNQ9P2M7 1197 aaKnown RBP12.62□□□□□ -0.39
LINC00909-202ENST00000580048 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
LINC00909-202ENST00000580048 TMEM57Q8N5G2 664 aa12.62□□□□□ -0.39
LINC00909-202ENST00000580048 GPT2Q8TD30 523 aa12.62□□□□□ -0.39
LINC00909-202ENST00000580048 FAM135AQ9P2D6 1515 aa12.62□□□□□ -0.39
LINC00909-202ENST00000580048 NUP153P49790 1475 aaKnown RBP12.62□□□□□ -0.39
LINC00909-202ENST00000580048 PDS5BQ9NTI5 1447 aa12.62□□□□□ -0.39
LINC00909-202ENST00000580048 PLCB2Q00722 1185 aa12.61□□□□□ -0.39
LINC00909-202ENST00000580048 ZNF771Q7L3S4 317 aaPredicted RBP12.61□□□□□ -0.39
LINC00909-202ENST00000580048 ZNF710Q8N1W2 664 aa12.61□□□□□ -0.39
LINC00909-202ENST00000580048 ABCC2Q92887 1545 aa12.61□□□□□ -0.39
LINC00909-202ENST00000580048 KIF20AO95235 890 aa12.61□□□□□ -0.39
LINC00909-202ENST00000580048 EXOSC9Q06265 439 aaKnown RBP12.61□□□□□ -0.39
LINC00909-202ENST00000580048 TMEM63CQ9P1W3 806 aa12.61□□□□□ -0.39
LINC00909-202ENST00000580048 CDK11BP21127 795 aaKnown RBP12.61□□□□□ -0.39
LINC00909-202ENST00000580048 LRSAM1Q6UWE0 723 aa12.61□□□□□ -0.39
LINC00909-202ENST00000580048 NOB1Q9ULX3 412 aaKnown RBP12.61□□□□□ -0.39
LINC00909-202ENST00000580048 KIF3AQ9Y496 699 aa12.6□□□□□ -0.39
LINC00909-202ENST00000580048 IQGAP2Q13576 1575 aa12.6□□□□□ -0.39
LINC00909-202ENST00000580048 LETM1O95202 739 aaPredicted RBP12.6□□□□□ -0.39
LINC00909-202ENST00000580048 NUCB1Q02818 461 aa12.6□□□□□ -0.39
LINC00909-202ENST00000580048 WDR63Q8IWG1 891 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms