RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 CLTCL1P53675 1640 aa18.57■□□□□ 0.56
CDK5RAP3-216ENST00000579853 HFM1A2PYH4 1435 aa18.57■□□□□ 0.56
CDK5RAP3-216ENST00000579853 ATRNO75882 1429 aa18.57■□□□□ 0.56
CDK5RAP3-216ENST00000579853 ROBO2Q9HCK4 1378 aa18.55■□□□□ 0.56
CDK5RAP3-216ENST00000579853 RPGRIP1LQ68CZ1 1315 aa18.55■□□□□ 0.56
CDK5RAP3-216ENST00000579853 NPHP3Q7Z494 1330 aa18.55■□□□□ 0.56
CDK5RAP3-216ENST00000579853 COL22A1Q8NFW1 1626 aaPredicted RBP18.55■□□□□ 0.56
CDK5RAP3-216ENST00000579853 MYOM2P54296 1465 aa18.52■□□□□ 0.55
CDK5RAP3-216ENST00000579853 ESCO1Q5FWF5 840 aa18.5■□□□□ 0.55
CDK5RAP3-216ENST00000579853 LRPPRCP42704 1394 aaKnown RBP18.5■□□□□ 0.55
CDK5RAP3-216ENST00000579853 CDC42BPGQ6DT37 1551 aa18.48■□□□□ 0.55
CDK5RAP3-216ENST00000579853 BCL9LQ86UU0 1499 aa18.48■□□□□ 0.55
CDK5RAP3-216ENST00000579853 GJD4Q96KN9 370 aaPredicted RBP18.48■□□□□ 0.55
CDK5RAP3-216ENST00000579853 MARF1Q9Y4F3 1742 aaKnown RBP18.47■□□□□ 0.55
CDK5RAP3-216ENST00000579853 PXDNQ92626 1479 aa18.46■□□□□ 0.55
CDK5RAP3-216ENST00000579853 FOXO3O43524 673 aa18.45■□□□□ 0.54
CDK5RAP3-216ENST00000579853 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.43■□□□□ 0.54
CDK5RAP3-216ENST00000579853 NAIPQ13075 1403 aa18.43■□□□□ 0.54
CDK5RAP3-216ENST00000579853 PPLO60437 1756 aa18.42■□□□□ 0.54
CDK5RAP3-216ENST00000579853 BLMP54132 1417 aaPredicted RBP18.42■□□□□ 0.54
CDK5RAP3-216ENST00000579853 UNC5CLQ8IV45 518 aa18.42■□□□□ 0.54
CDK5RAP3-216ENST00000579853 XPCQ01831 940 aaPredicted RBP18.4■□□□□ 0.54
CDK5RAP3-216ENST00000579853 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
CDK5RAP3-216ENST00000579853 TECPR2O15040 1411 aa18.4■□□□□ 0.54
CDK5RAP3-216ENST00000579853 SF3B2Q13435 895 aaKnown RBP18.39■□□□□ 0.53
CDK5RAP3-216ENST00000579853 SLIT2O94813 1529 aa18.39■□□□□ 0.53
CDK5RAP3-216ENST00000579853 SPATA31A3Q5VYP0 1347 aa18.38■□□□□ 0.53
CDK5RAP3-216ENST00000579853 CCDC144AA2RUR9 1427 aa18.38■□□□□ 0.53
CDK5RAP3-216ENST00000579853 RALGAPBQ86X10 1494 aa18.38■□□□□ 0.53
CDK5RAP3-216ENST00000579853 ABCC11Q96J66 1382 aa18.37■□□□□ 0.53
CDK5RAP3-216ENST00000579853 RRBP1Q9P2E9 1410 aaKnown RBP18.37■□□□□ 0.53
CDK5RAP3-216ENST00000579853 KIF1AQ12756 1690 aa18.36■□□□□ 0.53
CDK5RAP3-216ENST00000579853 GLI3P10071 1580 aa18.35■□□□□ 0.53
CDK5RAP3-216ENST00000579853 ANKRD30BQ9BXX2 1392 aa18.35■□□□□ 0.53
CDK5RAP3-216ENST00000579853 WAPLQ7Z5K2 1190 aa18.35■□□□□ 0.53
CDK5RAP3-216ENST00000579853 PPARGC1BQ86YN6 1023 aaKnown RBP18.35■□□□□ 0.53
CDK5RAP3-216ENST00000579853 STK26Q9P289 416 aa18.35■□□□□ 0.53
CDK5RAP3-216ENST00000579853 NUTM2FA1L443 756 aa18.34■□□□□ 0.53
CDK5RAP3-216ENST00000579853 HAP1P54257 671 aaPredicted RBP18.34■□□□□ 0.53
CDK5RAP3-216ENST00000579853 PSME1Q06323 249 aa18.34■□□□□ 0.53
CDK5RAP3-216ENST00000579853 ADGRF5Q8IZF2 1346 aa18.33■□□□□ 0.53
CDK5RAP3-216ENST00000579853 KRT28Q7Z3Y7 464 aa18.33■□□□□ 0.52
CDK5RAP3-216ENST00000579853 SEPT12Q8IYM1 358 aa18.33■□□□□ 0.52
CDK5RAP3-216ENST00000579853 USP32Q8NFA0 1604 aa18.33■□□□□ 0.52
CDK5RAP3-216ENST00000579853 KNDC1Q76NI1 1749 aa18.32■□□□□ 0.52
CDK5RAP3-216ENST00000579853 VPS72Q15906 364 aa18.32■□□□□ 0.52
CDK5RAP3-216ENST00000579853 FMN2Q9NZ56 1722 aa18.32■□□□□ 0.52
CDK5RAP3-216ENST00000579853 ONECUT3O60422 494 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-216ENST00000579853 SIRT1Q96EB6 747 aa18.31■□□□□ 0.52
CDK5RAP3-216ENST00000579853 BRWD3Q6RI45 1802 aa18.3■□□□□ 0.52
CDK5RAP3-216ENST00000579853 DEFB132Q7Z7B7 95 aa18.3■□□□□ 0.52
CDK5RAP3-216ENST00000579853 TNS3Q68CZ2 1445 aa18.3■□□□□ 0.52
CDK5RAP3-216ENST00000579853 RGL3Q3MIN7 710 aa18.29■□□□□ 0.52
CDK5RAP3-216ENST00000579853 KRT27Q7Z3Y8 459 aa18.29■□□□□ 0.52
CDK5RAP3-216ENST00000579853 NWD2Q9ULI1 1742 aa18.29■□□□□ 0.52
CDK5RAP3-216ENST00000579853 TMEM132EQ6IEE7 984 aa18.28■□□□□ 0.52
CDK5RAP3-216ENST00000579853 PHF8Q9UPP1 1060 aa18.28■□□□□ 0.52
CDK5RAP3-216ENST00000579853 CCDC9Q9Y3X0 531 aaKnown RBP18.28■□□□□ 0.52
CDK5RAP3-216ENST00000579853 SPATA31E1Q6ZUB1 1445 aa18.28■□□□□ 0.52
CDK5RAP3-216ENST00000579853 YTHDC2Q9H6S0 1430 aaKnown RBP18.28■□□□□ 0.52
CDK5RAP3-216ENST00000579853 ARHGEF10O15013 1369 aa18.28■□□□□ 0.52
CDK5RAP3-216ENST00000579853 PIK3C2GO75747 1445 aa18.27■□□□□ 0.52
CDK5RAP3-216ENST00000579853 SBNO1A3KN83 1393 aa18.27■□□□□ 0.51
CDK5RAP3-216ENST00000579853 PLEKHH1Q9ULM0 1364 aa18.27■□□□□ 0.51
CDK5RAP3-216ENST00000579853 LRP5O75197 1615 aa18.27■□□□□ 0.51
CDK5RAP3-216ENST00000579853 BAG6P46379 1132 aa18.26■□□□□ 0.51
CDK5RAP3-216ENST00000579853 IFT172Q9UG01 1749 aa18.26■□□□□ 0.51
CDK5RAP3-216ENST00000579853 PLCH1Q4KWH8 1693 aa18.24■□□□□ 0.51
CDK5RAP3-216ENST00000579853 NRXN1Q9ULB1 1477 aa18.23■□□□□ 0.51
CDK5RAP3-216ENST00000579853 LMOD2Q6P5Q4 547 aa18.23■□□□□ 0.51
CDK5RAP3-216ENST00000579853 CABLES1Q8TDN4 633 aa18.23■□□□□ 0.51
CDK5RAP3-216ENST00000579853 DHX57Q6P158 1386 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP3-216ENST00000579853 A0A0G2JS52 829 aa18.22■□□□□ 0.51
CDK5RAP3-216ENST00000579853 MYT1Q01538 1121 aa18.22■□□□□ 0.51
CDK5RAP3-216ENST00000579853 C14orf93Q9H972 538 aaKnown RBP18.21■□□□□ 0.51
CDK5RAP3-216ENST00000579853 RGPD8O14715 1765 aaPredicted RBP18.2■□□□□ 0.5
CDK5RAP3-216ENST00000579853 FAM83GA6ND36 823 aa18.19■□□□□ 0.5
CDK5RAP3-216ENST00000579853 ACIN1Q9UKV3 1341 aaKnown RBP18.19■□□□□ 0.5
CDK5RAP3-216ENST00000579853 ABCA3Q99758 1704 aa18.18■□□□□ 0.5
CDK5RAP3-216ENST00000579853 ANKARQ7Z5J8 1434 aa18.18■□□□□ 0.5
CDK5RAP3-216ENST00000579853 HRCP23327 699 aa18.18■□□□□ 0.5
CDK5RAP3-216ENST00000579853 MPHOSPH9Q99550 1183 aa18.18■□□□□ 0.5
CDK5RAP3-216ENST00000579853 PLEKHG5O94827 1062 aa18.17■□□□□ 0.5
CDK5RAP3-216ENST00000579853 FAM98CQ17RN3 349 aaKnown RBP18.17■□□□□ 0.5
CDK5RAP3-216ENST00000579853 PSDA5PKW4 1024 aaPredicted RBP18.16■□□□□ 0.5
CDK5RAP3-216ENST00000579853 PRAM1Q96QH2 718 aa18.16■□□□□ 0.5
CDK5RAP3-216ENST00000579853 BTG4Q9NY30 223 aa18.16■□□□□ 0.5
CDK5RAP3-216ENST00000579853 POGKQ9P215 609 aa18.15■□□□□ 0.5
CDK5RAP3-216ENST00000579853 EIF3AQ14152 1382 aaKnown RBP18.15■□□□□ 0.5
CDK5RAP3-216ENST00000579853 GPRASP1Q5JY77 1395 aa18.15■□□□□ 0.5
CDK5RAP3-216ENST00000579853 PMFBP1Q8TBY8 1022 aa18.14■□□□□ 0.49
CDK5RAP3-216ENST00000579853 RGPD1P0DJD0 1748 aa18.14■□□□□ 0.49
CDK5RAP3-216ENST00000579853 DLC1Q96QB1 1528 aa18.13■□□□□ 0.49
CDK5RAP3-216ENST00000579853 COL14A1Q05707 1796 aaKnown RBP18.13■□□□□ 0.49
CDK5RAP3-216ENST00000579853 SAFB2Q14151 953 aaKnown RBP eCLIP18.13■□□□□ 0.49
CDK5RAP3-216ENST00000579853 CFAP70Q5T0N1 1121 aa18.13■□□□□ 0.49
CDK5RAP3-216ENST00000579853 NRAPQ86VF7 1730 aa18.12■□□□□ 0.49
CDK5RAP3-216ENST00000579853 EN1Q05925 392 aaPredicted RBP18.12■□□□□ 0.49
CDK5RAP3-216ENST00000579853 DISP2A7MBM2 1401 aa18.12■□□□□ 0.49
CDK5RAP3-216ENST00000579853 SPATA31A5Q5VU36 1347 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms