RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 SLAIN2Q9P270 581 aa23.59■■□□□ 1.37
RARA-209ENST00000579727 CADPS2Q86UW7 1296 aa23.58■■□□□ 1.37
RARA-209ENST00000579727 DCCP43146 1447 aa23.58■■□□□ 1.36
RARA-209ENST00000579727 TRAK1Q9UPV9 953 aa23.56■■□□□ 1.36
RARA-209ENST00000579727 MST1RQ04912 1400 aa23.56■■□□□ 1.36
RARA-209ENST00000579727 SAFB2Q14151 953 aaKnown RBP eCLIP23.55■■□□□ 1.36
RARA-209ENST00000579727 ARHGEF28Q8N1W1 1705 aaKnown RBP23.55■■□□□ 1.36
RARA-209ENST00000579727 TONSLQ96HA7 1378 aa23.54■■□□□ 1.36
RARA-209ENST00000579727 DLC1Q96QB1 1528 aa23.54■■□□□ 1.36
RARA-209ENST00000579727 CDC42BPGQ6DT37 1551 aa23.53■■□□□ 1.36
RARA-209ENST00000579727 TRPM1Q7Z4N2 1603 aa23.53■■□□□ 1.36
RARA-209ENST00000579727 PRAM1Q96QH2 718 aa23.53■■□□□ 1.36
RARA-209ENST00000579727 NBPF1Q3BBV0 1214 aa23.52■■□□□ 1.36
RARA-209ENST00000579727 COL16A1Q07092 1604 aaPredicted RBP23.49■■□□□ 1.35
RARA-209ENST00000579727 POGKQ9P215 609 aa23.48■■□□□ 1.35
RARA-209ENST00000579727 C1orf167Q5SNV9 1468 aa23.48■■□□□ 1.35
RARA-209ENST00000579727 FMN2Q9NZ56 1722 aa23.47■■□□□ 1.35
RARA-209ENST00000579727 BRINP3Q76B58 766 aa23.47■■□□□ 1.35
RARA-209ENST00000579727 UPF1Q92900 1129 aaKnown RBP eCLIP23.47■■□□□ 1.35
RARA-209ENST00000579727 NUTM2FA1L443 756 aa23.46■■□□□ 1.35
RARA-209ENST00000579727 LRP6O75581 1613 aa23.46■■□□□ 1.35
RARA-209ENST00000579727 SIRT1Q96EB6 747 aa23.46■■□□□ 1.35
RARA-209ENST00000579727 JCADQ9P266 1359 aa23.45■■□□□ 1.34
RARA-209ENST00000579727 NBPF8Q3BBV2 869 aa23.45■■□□□ 1.34
RARA-209ENST00000579727 MINK1Q8N4C8 1332 aaPredicted RBP23.43■■□□□ 1.34
RARA-209ENST00000579727 HIRIP3Q9BW71 556 aaPredicted RBP23.43■■□□□ 1.34
RARA-209ENST00000579727 NHSL1Q5SYE7 1610 aa23.43■■□□□ 1.34
RARA-209ENST00000579727 AHDC1Q5TGY3 1603 aaPredicted RBP23.43■■□□□ 1.34
RARA-209ENST00000579727 RGPD8O14715 1765 aaPredicted RBP23.42■■□□□ 1.34
RARA-209ENST00000579727 CCER1Q8TC90 406 aaPredicted RBP23.42■■□□□ 1.34
RARA-209ENST00000579727 ADGRB2O60241 1585 aa23.42■■□□□ 1.34
RARA-209ENST00000579727 DDX17Q92841 729 aaKnown RBP23.41■■□□□ 1.34
RARA-209ENST00000579727 ORAI2Q96SN7 254 aa23.41■■□□□ 1.34
RARA-209ENST00000579727 ROCK2O75116 1388 aaKnown RBP23.4■■□□□ 1.34
RARA-209ENST00000579727 SHPRHQ149N8 1683 aa23.38■■□□□ 1.33
RARA-209ENST00000579727 QRICH2Q9H0J4 1663 aa23.38■■□□□ 1.33
RARA-209ENST00000579727 USP32Q8NFA0 1604 aa23.37■■□□□ 1.33
RARA-209ENST00000579727 ESCO1Q5FWF5 840 aa23.36■■□□□ 1.33
RARA-209ENST00000579727 RALGAPBQ86X10 1494 aa23.35■■□□□ 1.33
RARA-209ENST00000579727 CLSPNQ9HAW4 1339 aa23.34■■□□□ 1.33
RARA-209ENST00000579727 CENPJQ9HC77 1338 aaPredicted RBP23.32■■□□□ 1.32
RARA-209ENST00000579727 KIF1AQ12756 1690 aa23.32■■□□□ 1.32
RARA-209ENST00000579727 TULP4Q9NRJ4 1543 aa23.31■■□□□ 1.32
RARA-209ENST00000579727 GPRASP1Q5JY77 1395 aa23.3■■□□□ 1.32
RARA-209ENST00000579727 ZNF772Q68DY9 489 aaPredicted RBP23.3■■□□□ 1.32
RARA-209ENST00000579727 SPATA31A6Q5VVP1 1343 aa23.3■■□□□ 1.32
RARA-209ENST00000579727 WASLO00401 505 aaPredicted RBP23.29■■□□□ 1.32
RARA-209ENST00000579727 MEX3CQ5U5Q3 659 aaKnown RBP23.29■■□□□ 1.32
RARA-209ENST00000579727 CARD11Q9BXL7 1154 aa23.29■■□□□ 1.32
RARA-209ENST00000579727 XPCQ01831 940 aaPredicted RBP23.28■■□□□ 1.32
RARA-209ENST00000579727 PRR36Q9H6K5 1346 aa23.28■■□□□ 1.32
RARA-209ENST00000579727 ANKARQ7Z5J8 1434 aa23.27■■□□□ 1.32
RARA-209ENST00000579727 FOXO3O43524 673 aa23.26■■□□□ 1.31
RARA-209ENST00000579727 ITSN1Q15811 1721 aa23.25■■□□□ 1.31
RARA-209ENST00000579727 EIF3AQ14152 1382 aaKnown RBP23.25■■□□□ 1.31
RARA-209ENST00000579727 ATP7BP35670 1465 aa23.24■■□□□ 1.31
RARA-209ENST00000579727 PXDNQ92626 1479 aa23.24■■□□□ 1.31
RARA-209ENST00000579727 PMFBP1Q8TBY8 1022 aa23.24■■□□□ 1.31
RARA-209ENST00000579727 CDK19Q9BWU1 502 aa23.24■■□□□ 1.31
RARA-209ENST00000579727 PHF8Q9UPP1 1060 aa23.24■■□□□ 1.31
RARA-209ENST00000579727 CDK12Q9NYV4 1490 aaPredicted RBP23.24■■□□□ 1.31
RARA-209ENST00000579727 TOPAZ1Q8N9V7 1692 aa23.23■■□□□ 1.31
RARA-209ENST00000579727 RXRBP28702 533 aa23.23■■□□□ 1.31
RARA-209ENST00000579727 NPHP3Q7Z494 1330 aa23.23■■□□□ 1.31
RARA-209ENST00000579727 SOS2Q07890 1332 aaPredicted RBP23.22■■□□□ 1.31
RARA-209ENST00000579727 LRRC59Q96AG4 307 aaKnown RBP23.2■■□□□ 1.3
RARA-209ENST00000579727 PNPLA6Q8IY17 1366 aa23.19■■□□□ 1.3
RARA-209ENST00000579727 SRPK2P78362 688 aaKnown RBP23.19■■□□□ 1.3
RARA-209ENST00000579727 NUDT16Q96DE0 195 aaKnown RBP23.19■■□□□ 1.3
RARA-209ENST00000579727 TIMELESSQ9UNS1 1208 aa23.19■■□□□ 1.3
RARA-209ENST00000579727 CABP2Q9NPB3 220 aa23.18■■□□□ 1.3
RARA-209ENST00000579727 SRCAPQ6ZRS2 3230 aa23.17■■□□□ 1.3
RARA-209ENST00000579727 NUTM2BA6NNL0 878 aaPredicted RBP23.16■■□□□ 1.3
RARA-209ENST00000579727 NUTM2EB1AL46 878 aaPredicted RBP23.16■■□□□ 1.3
RARA-209ENST00000579727 KRT28Q7Z3Y7 464 aa23.16■■□□□ 1.3
RARA-209ENST00000579727 NUTM2AQ8IVF1 878 aaPredicted RBP23.16■■□□□ 1.3
RARA-209ENST00000579727 RGS12O14924 1447 aa23.15■■□□□ 1.3
RARA-209ENST00000579727 AFF2P51816 1311 aa23.14■■□□□ 1.3
RARA-209ENST00000579727 TRPM3Q9HCF6 1732 aaPredicted RBP23.13■■□□□ 1.29
RARA-209ENST00000579727 COL22A1Q8NFW1 1626 aaPredicted RBP23.13■■□□□ 1.29
RARA-209ENST00000579727 PSME1Q06323 249 aa23.13■■□□□ 1.29
RARA-209ENST00000579727 EVC2Q86UK5 1308 aa23.12■■□□□ 1.29
RARA-209ENST00000579727 PPIP5K1Q6PFW1 1433 aa23.12■■□□□ 1.29
RARA-209ENST00000579727 NGDNQ8NEJ9 315 aaKnown RBP23.11■■□□□ 1.29
RARA-209ENST00000579727 TNS3Q68CZ2 1445 aa23.1■■□□□ 1.29
RARA-209ENST00000579727 PLEKHG5O94827 1062 aa23.1■■□□□ 1.29
RARA-209ENST00000579727 USP47Q96K76 1375 aa23.1■■□□□ 1.29
RARA-209ENST00000579727 SPATA31A3Q5VYP0 1347 aa23.09■■□□□ 1.29
RARA-209ENST00000579727 ST20-MTHFSA0A0A6YYL1 179 aa23.09■■□□□ 1.29
RARA-209ENST00000579727 CCDC61Q9Y6R9 512 aa23.09■■□□□ 1.29
RARA-209ENST00000579727 SBNO2Q9Y2G9 1366 aa23.09■■□□□ 1.29
RARA-209ENST00000579727 LMOD2Q6P5Q4 547 aa23.08■■□□□ 1.29
RARA-209ENST00000579727 ALS2Q96Q42 1657 aa23.07■■□□□ 1.28
RARA-209ENST00000579727 ACEP12821 1306 aa23.07■■□□□ 1.28
RARA-209ENST00000579727 ABCA3Q99758 1704 aa23.05■■□□□ 1.28
RARA-209ENST00000579727 SBNO1A3KN83 1393 aa23.05■■□□□ 1.28
RARA-209ENST00000579727 POLR3AO14802 1390 aaPredicted RBP23.04■■□□□ 1.28
RARA-209ENST00000579727 PAK3O75914 559 aaPredicted RBP23.04■■□□□ 1.28
RARA-209ENST00000579727 ADAMTS2O95450 1211 aa23.04■■□□□ 1.28
RARA-209ENST00000579727 PLEKHG3A1L390 1219 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms