RNA–Protein interactions for RNA: ENST00000579688.1

SPECC1-213, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-213ENST00000579688 COL22A1Q8NFW1 1626 aaPredicted RBP29.15■■■□□ 2.26
SPECC1-213ENST00000579688 RGL3Q3MIN7 710 aa29.14■■■□□ 2.26
SPECC1-213ENST00000579688 ANKRD30BQ9BXX2 1392 aa29.13■■■□□ 2.25
SPECC1-213ENST00000579688 TECPR2O15040 1411 aa29.13■■■□□ 2.25
SPECC1-213ENST00000579688 ADAMTS2O95450 1211 aa29.13■■■□□ 2.25
SPECC1-213ENST00000579688 RGS12O14924 1447 aa29.12■■■□□ 2.25
SPECC1-213ENST00000579688 QTRT2Q9H974 415 aaKnown RBP29.11■■■□□ 2.25
SPECC1-213ENST00000579688 RBM6P78332 1123 aaKnown RBP29.1■■■□□ 2.25
SPECC1-213ENST00000579688 LRPPRCP42704 1394 aaKnown RBP29.1■■■□□ 2.25
SPECC1-213ENST00000579688 PIK3C2GO75747 1445 aa29.1■■■□□ 2.25
SPECC1-213ENST00000579688 NGLY1Q96IV0 654 aa29.09■■■□□ 2.25
SPECC1-213ENST00000579688 ESCO1Q5FWF5 840 aa29.08■■■□□ 2.25
SPECC1-213ENST00000579688 STK26Q9P289 416 aa29.08■■■□□ 2.25
SPECC1-213ENST00000579688 PXDNQ92626 1479 aa29.08■■■□□ 2.25
SPECC1-213ENST00000579688 NPHP3Q7Z494 1330 aa29.07■■■□□ 2.24
SPECC1-213ENST00000579688 WAPLQ7Z5K2 1190 aa29.06■■■□□ 2.24
SPECC1-213ENST00000579688 MARF1Q9Y4F3 1742 aaKnown RBP29.06■■■□□ 2.24
SPECC1-213ENST00000579688 ABCC11Q96J66 1382 aa29.05■■■□□ 2.24
SPECC1-213ENST00000579688 FMN2Q9NZ56 1722 aa29.05■■■□□ 2.24
SPECC1-213ENST00000579688 MYOM2P54296 1465 aa29.04■■■□□ 2.24
SPECC1-213ENST00000579688 TMEM132EQ6IEE7 984 aa29.04■■■□□ 2.24
SPECC1-213ENST00000579688 PLEKHH1Q9ULM0 1364 aa29.02■■■□□ 2.24
SPECC1-213ENST00000579688 YTHDC2Q9H6S0 1430 aaKnown RBP29.02■■■□□ 2.24
SPECC1-213ENST00000579688 FOXO3O43524 673 aa29■■■□□ 2.23
SPECC1-213ENST00000579688 USP21Q9UK80 565 aa29■■■□□ 2.23
SPECC1-213ENST00000579688 KIF1AQ12756 1690 aa28.99■■■□□ 2.23
SPECC1-213ENST00000579688 NUTM2FA1L443 756 aa28.99■■■□□ 2.23
SPECC1-213ENST00000579688 FNBP4Q8N3X1 1017 aaPredicted RBP28.99■■■□□ 2.23
SPECC1-213ENST00000579688 XPCQ01831 940 aaPredicted RBP28.98■■■□□ 2.23
SPECC1-213ENST00000579688 ACIN1Q9UKV3 1341 aaKnown RBP28.97■■■□□ 2.23
SPECC1-213ENST00000579688 NRXN1Q9ULB1 1477 aa28.97■■■□□ 2.23
SPECC1-213ENST00000579688 RGPD8O14715 1765 aaPredicted RBP28.96■■■□□ 2.23
SPECC1-213ENST00000579688 TRPC5Q9UL62 973 aaPredicted RBP28.96■■■□□ 2.23
SPECC1-213ENST00000579688 ATRNO75882 1429 aa28.95■■■□□ 2.23
SPECC1-213ENST00000579688 C14orf93Q9H972 538 aaKnown RBP28.93■■■□□ 2.22
SPECC1-213ENST00000579688 SIRT1Q96EB6 747 aa28.91■■■□□ 2.22
SPECC1-213ENST00000579688 BCL9LQ86UU0 1499 aa28.9■■■□□ 2.22
SPECC1-213ENST00000579688 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.89■■■□□ 2.22
SPECC1-213ENST00000579688 EP400Q96L91 3159 aa28.89■■■□□ 2.21
SPECC1-213ENST00000579688 ATAD2Q6PL18 1390 aa28.88■■■□□ 2.21
SPECC1-213ENST00000579688 CFAP70Q5T0N1 1121 aa28.88■■■□□ 2.21
SPECC1-213ENST00000579688 DHX57Q6P158 1386 aaKnown RBP28.88■■■□□ 2.21
SPECC1-213ENST00000579688 SPATA31A3Q5VYP0 1347 aa28.86■■■□□ 2.21
SPECC1-213ENST00000579688 RAB3GAP2Q9H2M9 1393 aa28.86■■■□□ 2.21
SPECC1-213ENST00000579688 USP32Q8NFA0 1604 aa28.84■■■□□ 2.21
SPECC1-213ENST00000579688 DLC1Q96QB1 1528 aa28.82■■■□□ 2.2
SPECC1-213ENST00000579688 KRT28Q7Z3Y7 464 aa28.81■■■□□ 2.2
SPECC1-213ENST00000579688 PRAM1Q96QH2 718 aa28.8■■■□□ 2.2
SPECC1-213ENST00000579688 PHF8Q9UPP1 1060 aa28.8■■■□□ 2.2
SPECC1-213ENST00000579688 ADGRB2O60241 1585 aa28.79■■■□□ 2.2
SPECC1-213ENST00000579688 SLIT2O94813 1529 aa28.79■■■□□ 2.2
SPECC1-213ENST00000579688 TNS3Q68CZ2 1445 aa28.79■■■□□ 2.2
SPECC1-213ENST00000579688 ABCA3Q99758 1704 aa28.79■■■□□ 2.2
SPECC1-213ENST00000579688 ADGRB1O14514 1584 aa28.79■■■□□ 2.2
SPECC1-213ENST00000579688 SAFB2Q14151 953 aaKnown RBP eCLIP28.78■■■□□ 2.2
SPECC1-213ENST00000579688 GJD4Q96KN9 370 aaPredicted RBP28.77■■■□□ 2.2
SPECC1-213ENST00000579688 GLI3P10071 1580 aa28.76■■■□□ 2.19
SPECC1-213ENST00000579688 PLCH1Q4KWH8 1693 aa28.74■■■□□ 2.19
SPECC1-213ENST00000579688 PSME1Q06323 249 aa28.74■■■□□ 2.19
SPECC1-213ENST00000579688 UNC5CLQ8IV45 518 aa28.74■■■□□ 2.19
SPECC1-213ENST00000579688 ANKARQ7Z5J8 1434 aa28.74■■■□□ 2.19
SPECC1-213ENST00000579688 RALGAPBQ86X10 1494 aa28.73■■■□□ 2.19
SPECC1-213ENST00000579688 POGKQ9P215 609 aa28.73■■■□□ 2.19
SPECC1-213ENST00000579688 NWD2Q9ULI1 1742 aa28.73■■■□□ 2.19
SPECC1-213ENST00000579688 SBNO1A3KN83 1393 aa28.73■■■□□ 2.19
SPECC1-213ENST00000579688 SRCAPQ6ZRS2 3230 aa28.71■■■□□ 2.19
SPECC1-213ENST00000579688 BRWD3Q6RI45 1802 aa28.71■■■□□ 2.19
SPECC1-213ENST00000579688 TRPM3Q9HCF6 1732 aaPredicted RBP28.69■■■□□ 2.18
SPECC1-213ENST00000579688 HAP1P54257 671 aaPredicted RBP28.69■■■□□ 2.18
SPECC1-213ENST00000579688 CABLES1Q8TDN4 633 aa28.69■■■□□ 2.18
SPECC1-213ENST00000579688 ARHGEF10O15013 1369 aa28.68■■■□□ 2.18
SPECC1-213ENST00000579688 TRAK1Q9UPV9 953 aa28.67■■■□□ 2.18
SPECC1-213ENST00000579688 PMFBP1Q8TBY8 1022 aa28.66■■■□□ 2.18
SPECC1-213ENST00000579688 ALS2Q96Q42 1657 aa28.65■■■□□ 2.18
SPECC1-213ENST00000579688 LMOD2Q6P5Q4 547 aa28.65■■■□□ 2.18
SPECC1-213ENST00000579688 KDM2AQ9Y2K7 1162 aa28.65■■■□□ 2.18
SPECC1-213ENST00000579688 PLEKHG5O94827 1062 aa28.64■■■□□ 2.18
SPECC1-213ENST00000579688 CCDC125Q86Z20 511 aa28.64■■■□□ 2.18
SPECC1-213ENST00000579688 DCAF11Q8TEB1 546 aa28.64■■■□□ 2.18
SPECC1-213ENST00000579688 HIRIP3Q9BW71 556 aaPredicted RBP28.64■■■□□ 2.18
SPECC1-213ENST00000579688 TULP4Q9NRJ4 1543 aa28.64■■■□□ 2.17
SPECC1-213ENST00000579688 ARHGEF28Q8N1W1 1705 aaKnown RBP28.63■■■□□ 2.17
SPECC1-213ENST00000579688 EIF3AQ14152 1382 aaKnown RBP28.62■■■□□ 2.17
SPECC1-213ENST00000579688 MINK1Q8N4C8 1332 aaPredicted RBP28.62■■■□□ 2.17
SPECC1-213ENST00000579688 VPS72Q15906 364 aa28.6■■■□□ 2.17
SPECC1-213ENST00000579688 PRR36Q9H6K5 1346 aa28.6■■■□□ 2.17
SPECC1-213ENST00000579688 NRAPQ86VF7 1730 aa28.6■■■□□ 2.17
SPECC1-213ENST00000579688 STAC3Q96MF2 364 aa28.59■■■□□ 2.17
SPECC1-213ENST00000579688 ITSN1Q15811 1721 aa28.57■■■□□ 2.16
SPECC1-213ENST00000579688 GPRASP1Q5JY77 1395 aa28.57■■■□□ 2.16
SPECC1-213ENST00000579688 CRYBG1Q9Y4K1 1723 aa28.57■■■□□ 2.16
SPECC1-213ENST00000579688 WASLO00401 505 aaPredicted RBP28.56■■■□□ 2.16
SPECC1-213ENST00000579688 HRCP23327 699 aa28.56■■■□□ 2.16
SPECC1-213ENST00000579688 BLMP54132 1417 aaPredicted RBP28.55■■■□□ 2.16
SPECC1-213ENST00000579688 FAM83GA6ND36 823 aa28.55■■■□□ 2.16
SPECC1-213ENST00000579688 SEPT12Q8IYM1 358 aa28.55■■■□□ 2.16
SPECC1-213ENST00000579688 ZRANB1Q9UGI0 708 aa28.55■■■□□ 2.16
SPECC1-213ENST00000579688 CCDC9Q9Y3X0 531 aaKnown RBP28.55■■■□□ 2.16
SPECC1-213ENST00000579688 COL14A1Q05707 1796 aaKnown RBP28.55■■■□□ 2.16
SPECC1-213ENST00000579688 ONECUT3O60422 494 aaPredicted RBP28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms