RNA–Protein interactions for RNA: ENST00000579650.5

PROCA1-208, Transcript of protein interacting with cyclin A1, human

TSL 1 (best)

Gene PROCA1, Length 1,007 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PROCA1-208	ENST00000579650	TRAK1	Q9UPV9	953 aa		32.73	■■■□□ 2.83
PROCA1-208	ENST00000579650	CLSPN	Q9HAW4	1339 aa		32.72	■■■□□ 2.83
PROCA1-208	ENST00000579650	PRAM1	Q96QH2	718 aa		32.71	■■■□□ 2.83
PROCA1-208	ENST00000579650	CDC42BPG	Q6DT37	1551 aa		32.68	■■■□□ 2.82
PROCA1-208	ENST00000579650	NBPF8	Q3BBV2	869 aa		32.68	■■■□□ 2.82
PROCA1-208	ENST00000579650	POGK	Q9P215	609 aa		32.65	■■■□□ 2.82
PROCA1-208	ENST00000579650	TRPM1	Q7Z4N2	1603 aa		32.65	■■■□□ 2.82
PROCA1-208	ENST00000579650	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.64	■■■□□ 2.82
PROCA1-208	ENST00000579650	C1orf167	Q5SNV9	1468 aa		32.64	■■■□□ 2.82
PROCA1-208	ENST00000579650	BRINP3	Q76B58	766 aa		32.64	■■■□□ 2.82
PROCA1-208	ENST00000579650	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.62	■■■□□ 2.81
PROCA1-208	ENST00000579650	CCER1	Q8TC90	406 aa	Predicted RBP	32.58	■■■□□ 2.81
PROCA1-208	ENST00000579650	ROCK2	O75116	1388 aa	Known RBP	32.56	■■■□□ 2.8
PROCA1-208	ENST00000579650	ADGRB2	O60241	1585 aa		32.55	■■■□□ 2.8
PROCA1-208	ENST00000579650	GPRASP1	Q5JY77	1395 aa		32.55	■■■□□ 2.8
PROCA1-208	ENST00000579650	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.55	■■■□□ 2.8
PROCA1-208	ENST00000579650	FMN2	Q9NZ56	1722 aa		32.54	■■■□□ 2.8
PROCA1-208	ENST00000579650	ORAI2	Q96SN7	254 aa		32.53	■■■□□ 2.8
PROCA1-208	ENST00000579650	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.52	■■■□□ 2.8
PROCA1-208	ENST00000579650	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.51	■■■□□ 2.79
PROCA1-208	ENST00000579650	TIMELESS	Q9UNS1	1208 aa		32.51	■■■□□ 2.79
PROCA1-208	ENST00000579650	RALGAPB	Q86X10	1494 aa		32.5	■■■□□ 2.79
PROCA1-208	ENST00000579650	PHLPP1	O60346	1717 aa		32.5	■■■□□ 2.79
PROCA1-208	ENST00000579650	NUTM2F	A1L443	756 aa		32.49	■■■□□ 2.79
PROCA1-208	ENST00000579650	COL16A1	Q07092	1604 aa	Predicted RBP	32.48	■■■□□ 2.79
PROCA1-208	ENST00000579650	NHSL1	Q5SYE7	1610 aa		32.47	■■■□□ 2.79
PROCA1-208	ENST00000579650	WASL	O00401	505 aa	Predicted RBP	32.45	■■■□□ 2.79
PROCA1-208	ENST00000579650	ESCO1	Q5FWF5	840 aa		32.45	■■■□□ 2.79
PROCA1-208	ENST00000579650	DDX17	Q92841	729 aa	Known RBP	32.45	■■■□□ 2.79
PROCA1-208	ENST00000579650	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.45	■■■□□ 2.78
PROCA1-208	ENST00000579650	ANKAR	Q7Z5J8	1434 aa		32.42	■■■□□ 2.78
PROCA1-208	ENST00000579650	CARD11	Q9BXL7	1154 aa		32.41	■■■□□ 2.78
PROCA1-208	ENST00000579650	USP32	Q8NFA0	1604 aa		32.4	■■■□□ 2.78
PROCA1-208	ENST00000579650	TULP4	Q9NRJ4	1543 aa		32.38	■■■□□ 2.77
PROCA1-208	ENST00000579650	PRR36	Q9H6K5	1346 aa		32.38	■■■□□ 2.77
PROCA1-208	ENST00000579650	EIF3A	Q14152	1382 aa	Known RBP	32.37	■■■□□ 2.77
PROCA1-208	ENST00000579650	JCAD	Q9P266	1359 aa		32.36	■■■□□ 2.77
PROCA1-208	ENST00000579650	SOS2	Q07890	1332 aa	Predicted RBP	32.36	■■■□□ 2.77
PROCA1-208	ENST00000579650	RGPD8	O14715	1765 aa	Predicted RBP	32.36	■■■□□ 2.77
PROCA1-208	ENST00000579650	QRICH2	Q9H0J4	1663 aa		32.35	■■■□□ 2.77
PROCA1-208	ENST00000579650	CDK19	Q9BWU1	502 aa		32.35	■■■□□ 2.77
PROCA1-208	ENST00000579650	FOXO3	O43524	673 aa		32.33	■■■□□ 2.77
PROCA1-208	ENST00000579650	PHF8	Q9UPP1	1060 aa		32.33	■■■□□ 2.77
PROCA1-208	ENST00000579650	KIF1A	Q12756	1690 aa		32.33	■■■□□ 2.77
PROCA1-208	ENST00000579650	NPHP3	Q7Z494	1330 aa		32.32	■■■□□ 2.76
PROCA1-208	ENST00000579650	ATP7B	P35670	1465 aa		32.3	■■■□□ 2.76
PROCA1-208	ENST00000579650	PXDN	Q92626	1479 aa		32.3	■■■□□ 2.76
PROCA1-208	ENST00000579650	LRRC59	Q96AG4	307 aa	Known RBP	32.3	■■■□□ 2.76
PROCA1-208	ENST00000579650	NUDT16	Q96DE0	195 aa	Known RBP	32.29	■■■□□ 2.76
PROCA1-208	ENST00000579650	MED1	Q15648	1581 aa	Predicted RBP	32.28	■■■□□ 2.76
PROCA1-208	ENST00000579650	SHPRH	Q149N8	1683 aa		32.27	■■■□□ 2.76
PROCA1-208	ENST00000579650	XPC	Q01831	940 aa	Predicted RBP	32.25	■■■□□ 2.75
PROCA1-208	ENST00000579650	PMFBP1	Q8TBY8	1022 aa		32.25	■■■□□ 2.75
PROCA1-208	ENST00000579650	SBNO2	Q9Y2G9	1366 aa		32.24	■■■□□ 2.75
PROCA1-208	ENST00000579650	PNPLA6	Q8IY17	1366 aa		32.23	■■■□□ 2.75
PROCA1-208	ENST00000579650	CABP2	Q9NPB3	220 aa		32.22	■■■□□ 2.75
PROCA1-208	ENST00000579650	SRPK2	P78362	688 aa	Known RBP	32.21	■■■□□ 2.75
PROCA1-208	ENST00000579650	KRT28	Q7Z3Y7	464 aa		32.21	■■■□□ 2.75
PROCA1-208	ENST00000579650	SPATA31A6	Q5VVP1	1343 aa		32.21	■■■□□ 2.75
PROCA1-208	ENST00000579650	EVC2	Q86UK5	1308 aa		32.21	■■■□□ 2.75
PROCA1-208	ENST00000579650	CCDC61	Q9Y6R9	512 aa		32.2	■■■□□ 2.75
PROCA1-208	ENST00000579650	TOPAZ1	Q8N9V7	1692 aa		32.2	■■■□□ 2.74
PROCA1-208	ENST00000579650	ITSN1	Q15811	1721 aa		32.18	■■■□□ 2.74
PROCA1-208	ENST00000579650	ST20-MTHFS	A0A0A6YYL1	179 aa		32.16	■■■□□ 2.74
PROCA1-208	ENST00000579650	PLEKHG3	A1L390	1219 aa		32.16	■■■□□ 2.74
PROCA1-208	ENST00000579650	DISP3	Q9P2K9	1392 aa		32.16	■■■□□ 2.74
PROCA1-208	ENST00000579650	LRP6	O75581	1613 aa		32.15	■■■□□ 2.74
PROCA1-208	ENST00000579650	PSME1	Q06323	249 aa		32.15	■■■□□ 2.74
PROCA1-208	ENST00000579650	USP47	Q96K76	1375 aa		32.15	■■■□□ 2.74
PROCA1-208	ENST00000579650	TESK2	Q96S53	571 aa		32.14	■■■□□ 2.74
PROCA1-208	ENST00000579650	SPATA31A3	Q5VYP0	1347 aa		32.14	■■■□□ 2.74
PROCA1-208	ENST00000579650	SBNO1	A3KN83	1393 aa		32.13	■■■□□ 2.73
PROCA1-208	ENST00000579650	NGDN	Q8NEJ9	315 aa	Known RBP	32.13	■■■□□ 2.73
PROCA1-208	ENST00000579650	POLR3A	O14802	1390 aa	Predicted RBP	32.12	■■■□□ 2.73
PROCA1-208	ENST00000579650	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.11	■■■□□ 2.73
PROCA1-208	ENST00000579650	PPIP5K1	Q6PFW1	1433 aa		32.1	■■■□□ 2.73
PROCA1-208	ENST00000579650	TNS3	Q68CZ2	1445 aa		32.09	■■■□□ 2.73
PROCA1-208	ENST00000579650	ACE	P12821	1306 aa		32.09	■■■□□ 2.73
PROCA1-208	ENST00000579650	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.08	■■■□□ 2.73
PROCA1-208	ENST00000579650	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.07	■■■□□ 2.72
PROCA1-208	ENST00000579650	NUTM2E	B1AL46	878 aa	Predicted RBP	32.07	■■■□□ 2.72
PROCA1-208	ENST00000579650	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.07	■■■□□ 2.72
PROCA1-208	ENST00000579650	CABP1	Q9NZU7	370 aa		32.06	■■■□□ 2.72
PROCA1-208	ENST00000579650	ATAD2	Q6PL18	1390 aa		32.05	■■■□□ 2.72
PROCA1-208	ENST00000579650	PUS7	Q96PZ0	661 aa	Known RBP	32.01	■■■□□ 2.71
PROCA1-208	ENST00000579650	PHF23	Q9BUL5	403 aa	Predicted RBP	32.01	■■■□□ 2.71
PROCA1-208	ENST00000579650	RGS17	Q9UGC6	210 aa	Predicted RBP	32.01	■■■□□ 2.71
PROCA1-208	ENST00000579650	ARHGEF10	O15013	1369 aa		32.01	■■■□□ 2.71
PROCA1-208	ENST00000579650	SLC24A1	O60721	1099 aa		32	■■■□□ 2.71
PROCA1-208	ENST00000579650	ALS2	Q96Q42	1657 aa		31.99	■■■□□ 2.71
PROCA1-208	ENST00000579650	MEX3C	Q5U5Q3	659 aa	Known RBP	31.98	■■■□□ 2.71
PROCA1-208	ENST00000579650	LMOD2	Q6P5Q4	547 aa		31.96	■■■□□ 2.71
PROCA1-208	ENST00000579650	PAK3	O75914	559 aa	Predicted RBP	31.94	■■■□□ 2.7
PROCA1-208	ENST00000579650	USP6	P35125	1406 aa		31.93	■■■□□ 2.7
PROCA1-208	ENST00000579650	ADAMTS2	O95450	1211 aa		31.93	■■■□□ 2.7
PROCA1-208	ENST00000579650	CPSF1	Q10570	1443 aa	Known RBP	31.92	■■■□□ 2.7
PROCA1-208	ENST00000579650	TMF1	P82094	1093 aa		31.92	■■■□□ 2.7
PROCA1-208	ENST00000579650	BRD4	O60885	1362 aa	Predicted RBP	31.92	■■■□□ 2.7
PROCA1-208	ENST00000579650	CABLES1	Q8TDN4	633 aa		31.91	■■■□□ 2.7
PROCA1-208	ENST00000579650	SSH2	Q76I76	1423 aa		31.91	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms