RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 PPARGC1BQ86YN6 1023 aaKnown RBP8.86□□□□□ -0.99
DDX42-210ENST00000579539 REPIN1Q9BWE0 567 aaKnown RBP8.86□□□□□ -0.99
DDX42-210ENST00000579539 ACIN1Q9UKV3 1341 aaKnown RBP8.85□□□□□ -0.99
DDX42-210ENST00000579539 NR1I2O75469 434 aa8.85□□□□□ -0.99
DDX42-210ENST00000579539 MDM2Q00987 491 aaPredicted RBP8.85□□□□□ -0.99
DDX42-210ENST00000579539 FUT2Q10981 343 aa8.85□□□□□ -0.99
DDX42-210ENST00000579539 MORN1Q5T089 497 aa8.84□□□□□ -0.99
DDX42-210ENST00000579539 TMUB1Q9BVT8 246 aa8.84□□□□□ -0.99
DDX42-210ENST00000579539 CD46P15529 392 aa8.83□□□□□ -1
DDX42-210ENST00000579539 ATP6V1AP38606 617 aa8.83□□□□□ -1
DDX42-210ENST00000579539 SH3D19Q5HYK7 790 aa8.83□□□□□ -1
DDX42-210ENST00000579539 PROSER2Q86WR7 435 aaPredicted RBP8.83□□□□□ -1
DDX42-210ENST00000579539 GGCXP38435 758 aa8.82□□□□□ -1
DDX42-210ENST00000579539 IRX2Q9BZI1 471 aaPredicted RBP8.82□□□□□ -1
DDX42-210ENST00000579539 PRKD2Q9BZL6 878 aa8.82□□□□□ -1
DDX42-210ENST00000579539 RNF223E7ERA6 249 aa8.81□□□□□ -1
DDX42-210ENST00000579539 ADH1BP00325 375 aa8.81□□□□□ -1
DDX42-210ENST00000579539 FNBP4Q8N3X1 1017 aaPredicted RBP8.81□□□□□ -1
DDX42-210ENST00000579539 POM121Q96HA1 1249 aa8.81□□□□□ -1
DDX42-210ENST00000579539 GPCPD1Q9NPB8 672 aa8.8□□□□□ -1
DDX42-210ENST00000579539 ZNF777Q9ULD5 760 aaPredicted RBP8.8□□□□□ -1
DDX42-210ENST00000579539 SLC27A5Q9Y2P5 690 aa8.8□□□□□ -1
DDX42-210ENST00000579539 S1PR4O95977 384 aa8.79□□□□□ -1
DDX42-210ENST00000579539 CLCN1P35523 988 aa8.79□□□□□ -1
DDX42-210ENST00000579539 THAP11Q96EK4 314 aa8.79□□□□□ -1
DDX42-210ENST00000579539 SPSB2Q99619 263 aa8.79□□□□□ -1
DDX42-210ENST00000579539 TRAIPQ9BWF2 469 aa8.79□□□□□ -1
DDX42-210ENST00000579539 V9GY48 417 aaPredicted RBP8.79□□□□□ -1
DDX42-210ENST00000579539 PPEF1O14829 653 aaPredicted RBP8.78□□□□□ -1
DDX42-210ENST00000579539 EMID1Q96A84 441 aaPredicted RBP8.78□□□□□ -1
DDX42-210ENST00000579539 FAM217BQ9NTX9 383 aaPredicted RBP8.78□□□□□ -1
DDX42-210ENST00000579539 SLC6A16Q9GZN6 736 aa8.77□□□□□ -1.01
DDX42-210ENST00000579539 KDM4AO75164 1064 aa8.76□□□□□ -1.01
DDX42-210ENST00000579539 KCTD17Q8N5Z5 321 aa8.76□□□□□ -1.01
DDX42-210ENST00000579539 ANKLE1Q8NAG6 615 aa8.76□□□□□ -1.01
DDX42-210ENST00000579539 SALL2Q9Y467 1007 aaPredicted RBP8.76□□□□□ -1.01
DDX42-210ENST00000579539 BRICD5Q6PL45 260 aa8.75□□□□□ -1.01
DDX42-210ENST00000579539 FAM160A2Q8N612 972 aaPredicted RBP8.75□□□□□ -1.01
DDX42-210ENST00000579539 CCDC97Q96F63 343 aaPredicted RBP8.75□□□□□ -1.01
DDX42-210ENST00000579539 FMNL1O95466 1100 aaPredicted RBP8.74□□□□□ -1.01
DDX42-210ENST00000579539 SKIV2LQ15477 1246 aaKnown RBP8.74□□□□□ -1.01
DDX42-210ENST00000579539 GRIPAP1Q4V328 841 aa8.74□□□□□ -1.01
DDX42-210ENST00000579539 SERPINA10Q9UK55 444 aa8.74□□□□□ -1.01
DDX42-210ENST00000579539 SSTR3P32745 418 aaPredicted RBP8.73□□□□□ -1.01
DDX42-210ENST00000579539 RNF19BQ6ZMZ0 732 aa8.73□□□□□ -1.01
DDX42-210ENST00000579539 SLC19A1P41440 591 aa8.72□□□□□ -1.01
DDX42-210ENST00000579539 USP46P62068 366 aa8.72□□□□□ -1.01
DDX42-210ENST00000579539 PROCA1Q8NCQ7 364 aaPredicted RBP8.72□□□□□ -1.01
DDX42-210ENST00000579539 HLA-CQ95604 372 aa8.72□□□□□ -1.01
DDX42-210ENST00000579539 PLA2G2CQ5R387 149 aa8.71□□□□□ -1.02
DDX42-210ENST00000579539 LIAT1Q6ZQX7 453 aa8.71□□□□□ -1.02
DDX42-210ENST00000579539 RETREG2Q8NC44 543 aa8.71□□□□□ -1.02
DDX42-210ENST00000579539 COG6Q9Y2V7 657 aa8.71□□□□□ -1.02
DDX42-210ENST00000579539 HOXA2O43364 376 aa8.7□□□□□ -1.02
DDX42-210ENST00000579539 RAD21O60216 631 aa8.7□□□□□ -1.02
DDX42-210ENST00000579539 GFRA3O60609 400 aa8.7□□□□□ -1.02
DDX42-210ENST00000579539 CLSPNQ9HAW4 1339 aa8.7□□□□□ -1.02
DDX42-210ENST00000579539 Q3C1V9 767 aa8.69□□□□□ -1.02
DDX42-210ENST00000579539 SPRYD7Q5W111 196 aa8.69□□□□□ -1.02
DDX42-210ENST00000579539 AEBP1Q8IUX7 1158 aa8.69□□□□□ -1.02
DDX42-210ENST00000579539 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.69□□□□□ -1.02
DDX42-210ENST00000579539 CCDC180Q9P1Z9 1646 aa8.69□□□□□ -1.02
DDX42-210ENST00000579539 SPDYE5A6NIY4 337 aa8.68□□□□□ -1.02
DDX42-210ENST00000579539 GUCA2AQ02747 115 aa8.68□□□□□ -1.02
DDX42-210ENST00000579539 LAPTM4AQ15012 233 aa8.68□□□□□ -1.02
DDX42-210ENST00000579539 MSS51Q4VC12 460 aa8.68□□□□□ -1.02
DDX42-210ENST00000579539 BEGAINQ9BUH8 593 aa8.68□□□□□ -1.02
DDX42-210ENST00000579539 PRDM9Q9NQV7 894 aa8.68□□□□□ -1.02
DDX42-210ENST00000579539 NUTM1Q86Y26 1132 aa8.67□□□□□ -1.02
DDX42-210ENST00000579539 MYSM1Q5VVJ2 828 aa8.66□□□□□ -1.02
DDX42-210ENST00000579539 TRIM67Q6ZTA4 783 aa8.66□□□□□ -1.02
DDX42-210ENST00000579539 ZNF598Q86UK7 904 aaKnown RBP8.66□□□□□ -1.02
DDX42-210ENST00000579539 SPIRE2Q8WWL2 714 aa8.66□□□□□ -1.02
DDX42-210ENST00000579539 POLR3EQ9NVU0 708 aa8.66□□□□□ -1.02
DDX42-210ENST00000579539 FCF1Q9Y324 198 aaKnown RBP8.66□□□□□ -1.02
DDX42-210ENST00000579539 NRG2O14511 850 aaPredicted RBP8.65□□□□□ -1.02
DDX42-210ENST00000579539 IRF5Q13568 498 aa8.65□□□□□ -1.02
DDX42-210ENST00000579539 Q6ZNB5 142 aa8.65□□□□□ -1.02
DDX42-210ENST00000579539 RGS22Q8NE09 1264 aa8.65□□□□□ -1.02
DDX42-210ENST00000579539 USB1Q9BQ65 265 aaKnown RBP8.65□□□□□ -1.02
DDX42-210ENST00000579539 SNRKQ9NRH2 765 aa8.65□□□□□ -1.02
DDX42-210ENST00000579539 PDZRN3Q9UPQ7 1066 aa8.65□□□□□ -1.02
DDX42-210ENST00000579539 MMP16P51512 607 aa8.64□□□□□ -1.03
DDX42-210ENST00000579539 FBXO31Q5XUX0 539 aaPredicted RBP8.64□□□□□ -1.03
DDX42-210ENST00000579539 SYMPKQ92797 1274 aaKnown RBP8.64□□□□□ -1.03
DDX42-210ENST00000579539 PCDHGC3Q9UN70 934 aa8.64□□□□□ -1.03
DDX42-210ENST00000579539 LCE2BO14633 110 aa8.62□□□□□ -1.03
DDX42-210ENST00000579539 FDX1P10109 184 aa8.62□□□□□ -1.03
DDX42-210ENST00000579539 NDUFV2P19404 249 aa8.62□□□□□ -1.03
DDX42-210ENST00000579539 RFC5P40937 340 aa8.62□□□□□ -1.03
DDX42-210ENST00000579539 CLK2P49760 499 aaKnown RBP8.62□□□□□ -1.03
DDX42-210ENST00000579539 NEUROD1Q13562 356 aa8.62□□□□□ -1.03
DDX42-210ENST00000579539 ZNF697Q5TEC3 545 aa8.62□□□□□ -1.03
DDX42-210ENST00000579539 ATP1B4Q9UN42 357 aaPredicted RBP8.62□□□□□ -1.03
DDX42-210ENST00000579539 ZNF330Q9Y3S2 320 aaPredicted RBP8.62□□□□□ -1.03
DDX42-210ENST00000579539 MOXD2PA6NHM9 499 aa8.61□□□□□ -1.03
DDX42-210ENST00000579539 DXOO77932 396 aaKnown RBP8.61□□□□□ -1.03
DDX42-210ENST00000579539 RPIAP49247 311 aa8.61□□□□□ -1.03
DDX42-210ENST00000579539 TMCO4Q5TGY1 634 aa8.61□□□□□ -1.03
DDX42-210ENST00000579539 GDF9O60383 454 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms