RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 PPARGC1BQ86YN6 1023 aaKnown RBP8.86□□□□□ -0.99
DDX42-210ENST00000579539 REPIN1Q9BWE0 567 aaKnown RBP8.86□□□□□ -0.99
DDX42-210ENST00000579539 ACIN1Q9UKV3 1341 aaKnown RBP8.85□□□□□ -0.99
DDX42-210ENST00000579539 NR1I2O75469 434 aa8.85□□□□□ -0.99
DDX42-210ENST00000579539 MDM2Q00987 491 aaPredicted RBP8.85□□□□□ -0.99
DDX42-210ENST00000579539 FUT2Q10981 343 aa8.85□□□□□ -0.99
DDX42-210ENST00000579539 MORN1Q5T089 497 aa8.84□□□□□ -0.99
DDX42-210ENST00000579539 TMUB1Q9BVT8 246 aa8.84□□□□□ -0.99
DDX42-210ENST00000579539 CD46P15529 392 aa8.83□□□□□ -1
DDX42-210ENST00000579539 ATP6V1AP38606 617 aa8.83□□□□□ -1
DDX42-210ENST00000579539 SH3D19Q5HYK7 790 aa8.83□□□□□ -1
DDX42-210ENST00000579539 PROSER2Q86WR7 435 aaPredicted RBP8.83□□□□□ -1
DDX42-210ENST00000579539 GGCXP38435 758 aa8.82□□□□□ -1
DDX42-210ENST00000579539 IRX2Q9BZI1 471 aaPredicted RBP8.82□□□□□ -1
DDX42-210ENST00000579539 PRKD2Q9BZL6 878 aa8.82□□□□□ -1
DDX42-210ENST00000579539 RNF223E7ERA6 249 aa8.81□□□□□ -1
DDX42-210ENST00000579539 ADH1BP00325 375 aa8.81□□□□□ -1
DDX42-210ENST00000579539 FNBP4Q8N3X1 1017 aaPredicted RBP8.81□□□□□ -1
DDX42-210ENST00000579539 POM121Q96HA1 1249 aa8.81□□□□□ -1
DDX42-210ENST00000579539 GPCPD1Q9NPB8 672 aa8.8□□□□□ -1
DDX42-210ENST00000579539 ZNF777Q9ULD5 760 aaPredicted RBP8.8□□□□□ -1
DDX42-210ENST00000579539 SLC27A5Q9Y2P5 690 aa8.8□□□□□ -1
DDX42-210ENST00000579539 S1PR4O95977 384 aa8.79□□□□□ -1
DDX42-210ENST00000579539 CLCN1P35523 988 aa8.79□□□□□ -1
DDX42-210ENST00000579539 THAP11Q96EK4 314 aa8.79□□□□□ -1
DDX42-210ENST00000579539 SPSB2Q99619 263 aa8.79□□□□□ -1
DDX42-210ENST00000579539 TRAIPQ9BWF2 469 aa8.79□□□□□ -1
DDX42-210ENST00000579539 V9GY48 417 aaPredicted RBP8.79□□□□□ -1
DDX42-210ENST00000579539 PPEF1O14829 653 aaPredicted RBP8.78□□□□□ -1
DDX42-210ENST00000579539 EMID1Q96A84 441 aaPredicted RBP8.78□□□□□ -1
DDX42-210ENST00000579539 FAM217BQ9NTX9 383 aaPredicted RBP8.78□□□□□ -1
DDX42-210ENST00000579539 SLC6A16Q9GZN6 736 aa8.77□□□□□ -1.01
DDX42-210ENST00000579539 KDM4AO75164 1064 aa8.76□□□□□ -1.01
DDX42-210ENST00000579539 KCTD17Q8N5Z5 321 aa8.76□□□□□ -1.01
DDX42-210ENST00000579539 ANKLE1Q8NAG6 615 aa8.76□□□□□ -1.01
DDX42-210ENST00000579539 SALL2Q9Y467 1007 aaPredicted RBP8.76□□□□□ -1.01
DDX42-210ENST00000579539 BRICD5Q6PL45 260 aa8.75□□□□□ -1.01
DDX42-210ENST00000579539 FAM160A2Q8N612 972 aaPredicted RBP8.75□□□□□ -1.01
DDX42-210ENST00000579539 CCDC97Q96F63 343 aaPredicted RBP8.75□□□□□ -1.01
DDX42-210ENST00000579539 FMNL1O95466 1100 aaPredicted RBP8.74□□□□□ -1.01
DDX42-210ENST00000579539 SKIV2LQ15477 1246 aaKnown RBP8.74□□□□□ -1.01
DDX42-210ENST00000579539 GRIPAP1Q4V328 841 aa8.74□□□□□ -1.01
DDX42-210ENST00000579539 SERPINA10Q9UK55 444 aa8.74□□□□□ -1.01
DDX42-210ENST00000579539 SSTR3P32745 418 aaPredicted RBP8.73□□□□□ -1.01
DDX42-210ENST00000579539 RNF19BQ6ZMZ0 732 aa8.73□□□□□ -1.01
DDX42-210ENST00000579539 SLC19A1P41440 591 aa8.72□□□□□ -1.01
DDX42-210ENST00000579539 USP46P62068 366 aa8.72□□□□□ -1.01
DDX42-210ENST00000579539 PROCA1Q8NCQ7 364 aaPredicted RBP8.72□□□□□ -1.01
DDX42-210ENST00000579539 HLA-CQ95604 372 aa8.72□□□□□ -1.01
DDX42-210ENST00000579539 PLA2G2CQ5R387 149 aa8.71□□□□□ -1.02
DDX42-210ENST00000579539 LIAT1Q6ZQX7 453 aa8.71□□□□□ -1.02
DDX42-210ENST00000579539 RETREG2Q8NC44 543 aa8.71□□□□□ -1.02
DDX42-210ENST00000579539 COG6Q9Y2V7 657 aa8.71□□□□□ -1.02
DDX42-210ENST00000579539 HOXA2O43364 376 aa8.7□□□□□ -1.02
DDX42-210ENST00000579539 RAD21O60216 631 aa8.7□□□□□ -1.02
DDX42-210ENST00000579539 GFRA3O60609 400 aa8.7□□□□□ -1.02
DDX42-210ENST00000579539 CLSPNQ9HAW4 1339 aa8.7□□□□□ -1.02
DDX42-210ENST00000579539 Q3C1V9 767 aa8.69□□□□□ -1.02
DDX42-210ENST00000579539 SPRYD7Q5W111 196 aa8.69□□□□□ -1.02
DDX42-210ENST00000579539 AEBP1Q8IUX7 1158 aa8.69□□□□□ -1.02
DDX42-210ENST00000579539 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.69□□□□□ -1.02
DDX42-210ENST00000579539 CCDC180Q9P1Z9 1646 aa8.69□□□□□ -1.02
DDX42-210ENST00000579539 SPDYE5A6NIY4 337 aa8.68□□□□□ -1.02
DDX42-210ENST00000579539 GUCA2AQ02747 115 aa8.68□□□□□ -1.02
DDX42-210ENST00000579539 LAPTM4AQ15012 233 aa8.68□□□□□ -1.02
DDX42-210ENST00000579539 MSS51Q4VC12 460 aa8.68□□□□□ -1.02
DDX42-210ENST00000579539 BEGAINQ9BUH8 593 aa8.68□□□□□ -1.02
DDX42-210ENST00000579539 PRDM9Q9NQV7 894 aa8.68□□□□□ -1.02
DDX42-210ENST00000579539 NUTM1Q86Y26 1132 aa8.67□□□□□ -1.02
DDX42-210ENST00000579539 MYSM1Q5VVJ2 828 aa8.66□□□□□ -1.02
DDX42-210ENST00000579539 TRIM67Q6ZTA4 783 aa8.66□□□□□ -1.02
DDX42-210ENST00000579539 ZNF598Q86UK7 904 aaKnown RBP8.66□□□□□ -1.02
DDX42-210ENST00000579539 SPIRE2Q8WWL2 714 aa8.66□□□□□ -1.02
DDX42-210ENST00000579539 POLR3EQ9NVU0 708 aa8.66□□□□□ -1.02
DDX42-210ENST00000579539 FCF1Q9Y324 198 aaKnown RBP8.66□□□□□ -1.02
DDX42-210ENST00000579539 NRG2O14511 850 aaPredicted RBP8.65□□□□□ -1.02
DDX42-210ENST00000579539 IRF5Q13568 498 aa8.65□□□□□ -1.02
DDX42-210ENST00000579539 Q6ZNB5 142 aa8.65□□□□□ -1.02
DDX42-210ENST00000579539 RGS22Q8NE09 1264 aa8.65□□□□□ -1.02
DDX42-210ENST00000579539 USB1Q9BQ65 265 aaKnown RBP8.65□□□□□ -1.02
DDX42-210ENST00000579539 SNRKQ9NRH2 765 aa8.65□□□□□ -1.02
DDX42-210ENST00000579539 PDZRN3Q9UPQ7 1066 aa8.65□□□□□ -1.02
DDX42-210ENST00000579539 MMP16P51512 607 aa8.64□□□□□ -1.03
DDX42-210ENST00000579539 FBXO31Q5XUX0 539 aaPredicted RBP8.64□□□□□ -1.03
DDX42-210ENST00000579539 SYMPKQ92797 1274 aaKnown RBP8.64□□□□□ -1.03
DDX42-210ENST00000579539 PCDHGC3Q9UN70 934 aa8.64□□□□□ -1.03
DDX42-210ENST00000579539 LCE2BO14633 110 aa8.62□□□□□ -1.03
DDX42-210ENST00000579539 FDX1P10109 184 aa8.62□□□□□ -1.03
DDX42-210ENST00000579539 NDUFV2P19404 249 aa8.62□□□□□ -1.03
DDX42-210ENST00000579539 RFC5P40937 340 aa8.62□□□□□ -1.03
DDX42-210ENST00000579539 CLK2P49760 499 aaKnown RBP8.62□□□□□ -1.03
DDX42-210ENST00000579539 NEUROD1Q13562 356 aa8.62□□□□□ -1.03
DDX42-210ENST00000579539 ZNF697Q5TEC3 545 aa8.62□□□□□ -1.03
DDX42-210ENST00000579539 ATP1B4Q9UN42 357 aaPredicted RBP8.62□□□□□ -1.03
DDX42-210ENST00000579539 ZNF330Q9Y3S2 320 aaPredicted RBP8.62□□□□□ -1.03
DDX42-210ENST00000579539 MOXD2PA6NHM9 499 aa8.61□□□□□ -1.03
DDX42-210ENST00000579539 DXOO77932 396 aaKnown RBP8.61□□□□□ -1.03
DDX42-210ENST00000579539 RPIAP49247 311 aa8.61□□□□□ -1.03
DDX42-210ENST00000579539 TMCO4Q5TGY1 634 aa8.61□□□□□ -1.03
DDX42-210ENST00000579539 GDF9O60383 454 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms